| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H6g11950 | 6:2,662,085-2,666,305 | - | C2H6g17539 | CX6g042556 | LOC_Os06g06820 | Os06g0163600 | - | Detail |
| C1H6g04897 | 6:2,686,732-2,687,380 | + | C2H6g07092 | - | - | - | - | Detail |
| C1H6g25116 | 6:2,691,433-2,696,525 | - | C2H6g28033 | CX6g045281 | LOC_Os06g06860 | Os06g0163900 | - | Detail |
| C1H6g18139 | 6:2,697,319-2,699,682 | - | - | CX6g043654 | LOC_Os06g07810 | Os10g0443400 | - | Detail |
| C1H6g07484 | 6:2,707,352-2,711,458 | - | C2H6g16325 | CX6g041288 | LOC_Os06g06860 | Os06g0163900 | - | Detail |
| C1H6g17754 | 6:2,720,000-2,723,726 | - | C2H6g27105 | CX6g045281 | LOC_Os06g06850 | Os06g0163701 | - | Detail |
| C1H6g15154 | 6:2,728,142-2,738,069 | - | C2H6g19300 | CX6g044665 | LOC_Os06g06870 | Os06g0164000 | - | Detail |
| C1H6g16643 | 6:2,741,623-2,744,498 | - | C2H6g13584 | CX6g043425 | LOC_Os06g06880 | Os06g0164100 | - | Detail |
| C1H6g22631 | 6:2,747,651-2,750,490 | + | C2H6g17066 | CX6g043164 | LOC_Os06g06900 | Os06g0164400 | SD6 | Detail |
| C1H6g27522 | 6:2,752,730-2,755,570 | + | C2H6g15240 | CX6g043763 | LOC_Os06g06910 | Os06g0164500 | - | Detail |
| C1H6g04079 | 6:2,760,519-2,760,882 | + | C2H6g27147 | - | - | Os06g0164800 | - | Detail |
| C1H6g26949 | 6:2,761,647-2,764,106 | - | C2H6g26148 | CX6g043662 | LOC_Os06g06930 | Os06g0164900 | SDRLK-66 | Detail |
| C1H6g21095 | 6:2,769,047-2,771,452 | - | C2H6g20187 | CX6g041199 | LOC_Os06g06940 | Os06g0165500 | SDRLK-37 | Detail |
| C1H6g05800 | 6:2,778,587-2,781,004 | - | C2H6g10099 | CX6g042251 | LOC_Os06g06960 | Os06g0165500 | SDRLK-37 | Detail |
| C1H6g20561 | 6:2,786,899-2,789,313 | - | C2H6g10099 | CX6g042251 | LOC_Os06g06960 | Os06g0165500 | SDRLK-37 | Detail |
| C1H6g08551 | 6:2,793,065-2,794,313 | + | C2H6g02227 | CX6g042723 | - | Os06g0165800 | - | Detail |
| C1H6g25925 | 6:2,796,930-2,797,118 | + | - | - | LOC_Os06g06990 | Os06g0165900 | - | Detail |
| C1H6g29634 | 6:2,799,448-2,802,778 | - | C2H6g29462 | CX6g041346 | LOC_Os06g07000 | Os06g0166000 | - | Detail |
| C1H6g29698 | 6:2,803,559-2,812,214 | + | C2H6g29018 | CX6g041863 | LOC_Os06g07010 | Os06g0166100 | - | Detail |
| C1H6g22658 | 6:2,818,673-2,819,227 | + | C2H6g04144 | CX6g043991 | LOC_Os06g07030 | Os06g0166400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX1g001283 | 1:13,769,240-13,769,464 | - | - | - | - | Os09g0373750 | - | Detail |
| CX1g003305 | 1:13,782,320-13,782,511 | + | - | - | - | - | - | Detail |
| CX1g003934 | 1:13,784,988-13,791,999 | + | C1H1g21458 | C2H1g03369 | LOC_Os01g27020 | Os01g0367700 | - | Detail |
| CX1g006855 | 1:13,798,861-13,805,895 | - | C1H1g24923 | C2H1g04184 | LOC_Os01g27040 | Os01g0367900 | OsCHR728, CHR728, OsCHR11 | Detail |
| CX1g002622 | 1:13,808,166-13,809,557 | - | - | - | - | - | - | Detail |
| CX1g001803 | 1:13,814,944-13,815,279 | + | - | - | - | - | - | Detail |
| CX1g000946 | 1:13,817,316-13,817,597 | - | - | - | LOC_Os01g28380 | - | - | Detail |
| CX1g000728 | 1:13,822,321-13,823,657 | + | C1H1g29900 | C2H1g05311 | LOC_Os01g27100 | Os01g0368500 | - | Detail |
| CX1g000035 | 1:13,829,483-13,830,130 | + | C1H1g29900 | C2H1g05311 | LOC_Os01g27120 | Os01g0368700 | - | Detail |
| CX1g004970 | 1:13,836,989-13,837,267 | - | - | - | - | - | - | Detail |
| CX1g004894 | 1:13,841,178-13,841,386 | - | - | - | - | - | - | Detail |
| CX1g002302 | 1:13,845,046-13,852,808 | - | C1H1g21071 | C2H1g23898 | LOC_Os01g27150 | Os01g0369000 | - | Detail |
| CX1g000076 | 1:13,857,137-13,857,289 | + | - | - | - | - | - | Detail |
| CX1g007040 | 1:13,860,973-13,866,371 | + | C1H1g21722 | C2H1g08610 | LOC_Os01g27160 | Os01g0369200 | OsCUL1-3 | Detail |
| CX1g002985 | 1:13,866,896-13,871,581 | - | C1H1g09984 | C2H1g00961 | LOC_Os01g27170 | Os01g0369300 | OsHAK3 | Detail |
| CX1g004644 | 1:13,874,924-13,875,937 | + | C1H1g21027 | C2H1g23105 | LOC_Os01g27190 | Os01g0369500 | - | Detail |
| CX1g005028 | 1:13,879,674-13,880,133 | + | C1H1g28118 | C2H1g16294 | - | - | - | Detail |
| CX1g002058 | 1:13,884,746-13,886,038 | - | C1H1g15388 | C2H1g16460 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| CX1g005613 | 1:13,904,180-13,905,431 | - | C1H1g03904 | C2H1g16460 | LOC_Os01g27210 | Os01g0369700 | - | Detail |
| CX1g005792 | 1:13,906,318-13,906,641 | - | - | - | - | - | - | Detail |