| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g12222 | 6:19,178,808-19,182,894 | + | C1H6g06781 | CX6g044842 | LOC_Os06g37000 | Os06g0566100 | - | Detail |
| C2H6g05740 | 6:19,184,459-19,186,897 | + | C1H6g20512 | CX6g045261 | LOC_Os06g37010 | Os06g0566300 | - | Detail |
| C2H6g23857 | 6:19,219,399-19,219,775 | + | - | - | - | - | - | Detail |
| C2H6g25496 | 6:19,224,710-19,226,891 | - | C1H6g02032 | CX6g045076 | LOC_Os06g37080 | Os06g0567200 | OsAAO1 | Detail |
| C2H6g10335 | 6:19,229,811-19,231,228 | + | C1H6g21176 | - | - | Os06g0566700 | - | Detail |
| C2H6g11534 | 6:19,239,649-19,241,535 | + | C1H6g17693 | CX6g041847 | LOC_Os06g37070 | Os06g0567000 | - | Detail |
| C2H6g19087 | 6:19,248,309-19,253,168 | + | C1H6g27275 | CX6g041814 | LOC_Os06g37080 | Os06g0567200 | OsAAO1 | Detail |
| C2H6g01618 | 6:19,276,972-19,280,931 | + | C1H6g21542 | CX6g044886 | LOC_Os06g37150 | Os06g0567900 | AO, OsAAO2 | Detail |
| C2H6g02242 | 6:19,281,094-19,285,497 | - | C1H6g28567 | CX6g042535 | LOC_Os06g37160 | Os06g0568000 | - | Detail |
| C2H6g07187 | 6:19,288,619-19,293,638 | - | C1H6g24215 | CX6g042255 | LOC_Os06g37180 | Os06g0568200 | - | Detail |
| C2H6g09052 | 6:19,324,948-19,333,234 | - | C1H6g14082 | CX6g041824 | LOC_Os06g37224 | Os06g0568600 | OsKOL5, CYP701A9 | Detail |
| C2H6g09927 | 6:19,357,878-19,366,181 | - | C1H6g22956 | CX6g045332 | LOC_Os06g37300 | Os06g0569500 | KO4, OsKO4, OsKOL4, KOS1, CYP701A8, OsKO2 | Detail |
| C2H6g05317 | 6:19,370,801-19,371,202 | + | C1H6g21110 | CX6g043261 | - | - | - | Detail |
| C2H6g02574 | 6:19,387,391-19,395,950 | - | C1H6g30624 | CX6g044759 | LOC_Os06g37330 | Os06g0570566 | - | Detail |
| C2H6g17532 | 6:19,407,243-19,410,630 | - | C1H6g28276 | CX6g045040 | LOC_Os06g37364 | Os06g0570100 | D35, OsKOL2, CYP701A6, OsKO2 | Detail |
| C2H6g07805 | 6:19,416,734-19,418,042 | - | C1H6g11014 | - | - | Os06g0570600 | - | Detail |
| C2H6g18371 | 6:19,426,108-19,426,558 | - | C1H6g30624 | CX6g044759 | LOC_Os06g37364 | Os06g0570100 | D35, OsKOL2, CYP701A6, OsKO2 | Detail |
| C2H6g20521 | 6:19,427,909-19,430,828 | - | C1H6g11014 | CX6g045040 | LOC_Os06g37364 | Os06g0570600 | - | Detail |
| C2H6g06249 | 6:19,449,979-19,453,345 | + | C1H6g06179 | CX6g043330 | LOC_Os06g37410 | Os06g0570900 | - | Detail |
| C2H6g25933 | 6:19,454,136-19,458,316 | - | C1H6g12983 | CX6g041937 | LOC_Os06g37420 | Os06g0571100 | OsHDAC6, HDA706 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030208 | 3:5,081,631-5,082,761 | + | C1H3g20245 | C2H3g03215 | LOC_Os03g14310 | Os03g0247300 | Sc, Sc-j | Detail |
| CX3g026445 | 3:5,087,433-5,088,308 | + | C1H3g10782 | C2H3g29617 | LOC_Os03g11100 | Os03g0209400 | GOT1B, GLUP2/GOT1B, GPA4 | Detail |
| CX3g027814 | 3:5,089,280-5,093,407 | - | C1H3g28553 | C2H3g20518 | LOC_Os03g11110 | Os03g0209500 | - | Detail |
| CX3g027707 | 3:5,097,738-5,104,858 | + | C1H3g28595 | C2H3g02047 | LOC_Os03g11120 | Os03g0209600 | - | Detail |
| CX3g029679 | 3:5,105,801-5,108,916 | + | C1H3g28031 | C2H3g27933 | LOC_Os03g15190 | Os03g0209700 | - | Detail |
| CX3g026421 | 3:5,111,803-5,121,928 | + | C1H3g31436 | C2H3g21412 | LOC_Os03g11140 | Os03g0209800 | - | Detail |
| CX3g027593 | 3:5,126,190-5,126,528 | - | C1H3g26339 | C2H3g16472 | LOC_Os03g11160 | Os03g0210000 | - | Detail |
| CX3g025375 | 3:5,128,687-5,129,040 | - | C1H3g24055 | C2H3g27277 | LOC_Os03g11170 | Os03g0210100 | - | Detail |
| CX3g024954 | 3:5,129,670-5,130,456 | + | - | - | LOC_Os03g11430 | - | - | Detail |
| CX3g028377 | 3:5,131,440-5,131,796 | - | C1H3g27613 | C2H3g18125 | LOC_Os03g11180 | Os03g0210200 | - | Detail |
| CX3g029308 | 3:5,135,678-5,141,736 | - | C1H3g13004 | C2H3g21913 | LOC_Os03g11200 | Os03g0210400 | - | Detail |
| CX3g027935 | 3:5,143,066-5,143,290 | - | - | - | - | Os03g0606466 | - | Detail |
| CX3g030415 | 3:5,145,410-5,147,641 | + | C1H3g15282 | C2H3g25075 | LOC_Os03g11210 | Os03g0210500 | - | Detail |
| CX3g031148 | 3:5,150,413-5,151,558 | - | C1H3g18916 | C2H3g24832 | LOC_Os03g11220 | Os03g0210600 | - | Detail |
| CX3g025909 | 3:5,152,360-5,153,348 | + | C1H3g29587 | C2H3g17169 | LOC_Os03g11230 | Os03g0210700 | - | Detail |
| CX3g029919 | 3:5,155,984-5,163,146 | - | C1H3g28959 | C2H3g29083 | LOC_Os03g11240 | Os03g0210800 | - | Detail |
| CX3g028792 | 3:5,167,868-5,168,346 | + | C1H3g06712 | C2H3g10848 | LOC_Os03g11250 | Os03g0210900 | - | Detail |
| CX3g028627 | 3:5,171,518-5,173,228 | + | C1H3g11024 | C2H3g14713 | LOC_Os03g11260 | Os03g0211100 | - | Detail |
| CX3g028711 | 3:5,184,563-5,186,869 | + | - | C2H3g08476 | LOC_Os03g11290 | Os03g0211400 | - | Detail |
| CX3g028056 | 3:5,187,823-5,189,879 | - | C1H3g14759 | C2H3g19439 | LOC_Os03g11300 | Os03g0211500 | - | Detail |