| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g27777 | 1:26,903,577-26,904,881 | + | C2H1g14542 | CX1g000877 | LOC_Os01g52380 | Os01g0721800 | - | Detail |
| C1H1g16429 | 1:26,907,034-26,909,887 | - | C2H1g03938 | CX1g001695 | LOC_Os01g52390 | Os01g0721900 | - | Detail |
| C1H1g19540 | 1:26,913,451-26,917,004 | + | C2H1g29212 | CX1g005554 | LOC_Os01g52400 | Os01g0722100 | - | Detail |
| C1H1g14417 | 1:26,925,623-26,927,295 | + | C2H1g15644 | CX1g004391 | LOC_Os01g52410 | Os01g0722300 | Os2R_MYB14 | Detail |
| C1H1g17552 | 1:26,938,467-26,942,242 | + | C2H1g14945 | CX1g002677 | LOC_Os01g52450 | Os01g0722700 | OsHXK9 | Detail |
| C1H1g17968 | 1:26,946,286-26,949,083 | - | C2H1g16107 | CX1g001570 | LOC_Os01g52470 | Os01g0723000 | - | Detail |
| C1H1g22223 | 1:26,951,203-26,952,076 | + | C2H1g09375 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C1H1g00329 | 1:26,952,184-26,952,905 | + | C2H1g00796 | CX1g004088 | LOC_Os01g52480 | Os01g0723100 | - | Detail |
| C1H1g27397 | 1:26,953,685-26,955,175 | - | C2H1g00282 | CX1g004240 | LOC_Os01g52490 | Os01g0723200 | - | Detail |
| C1H1g18013 | 1:26,962,480-26,968,150 | + | C2H1g25823 | CX1g001850 | LOC_Os01g52500 | Os01g0723400 | NADP-ME2, Os-NADP-ME2, Os-NADP-ME2-2 | Detail |
| C1H1g17264 | 1:26,969,834-26,975,477 | + | C2H1g08871 | CX1g003519 | LOC_Os01g52514 | Os01g0723500 | - | Detail |
| C1H1g03740 | 1:26,976,986-26,981,316 | + | C2H1g17638 | CX1g004209 | LOC_Os01g52530 | Os01g0723600 | - | Detail |
| C1H1g09315 | 1:26,983,980-26,987,890 | + | C2H1g22241 | CX1g004680 | LOC_Os01g52540 | Os01g0723700 | - | Detail |
| C1H1g17060 | 1:26,988,103-26,994,535 | - | C2H1g23039 | CX1g004575 | LOC_Os01g52550 | Os01g0723800 | - | Detail |
| C1H1g18463 | 1:27,012,831-27,022,129 | + | C2H1g05862 | CX1g004747 | LOC_Os01g52560 | Os01g0724500 | - | Detail |
| C1H1g09116 | 1:27,038,700-27,046,564 | + | C2H1g26023 | CX1g002347 | LOC_Os01g52610 | Os01g0725400 | - | Detail |
| C1H1g01881 | 1:27,047,370-27,050,594 | + | C2H1g19762 | CX1g003740 | LOC_Os01g52630 | Os01g0725600 | - | Detail |
| C1H1g28016 | 1:27,055,008-27,060,104 | + | C2H1g12468 | CX1g000922 | LOC_Os01g52640 | Os01g0725800 | - | Detail |
| C1H1g01009 | 1:27,060,442-27,061,041 | - | C2H1g25269 | CX1g004829 | LOC_Os01g52650 | Os01g0725900 | - | Detail |
| C1H1g26602 | 1:27,063,887-27,064,616 | - | C2H1g28455 | CX1g001737 | LOC_Os01g52660 | Os01g0726100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030208 | 3:5,081,631-5,082,761 | + | C1H3g20245 | C2H3g03215 | LOC_Os03g14310 | Os03g0247300 | Sc, Sc-j | Detail |
| CX3g026445 | 3:5,087,433-5,088,308 | + | C1H3g10782 | C2H3g29617 | LOC_Os03g11100 | Os03g0209400 | GOT1B, GLUP2/GOT1B, GPA4 | Detail |
| CX3g027814 | 3:5,089,280-5,093,407 | - | C1H3g28553 | C2H3g20518 | LOC_Os03g11110 | Os03g0209500 | - | Detail |
| CX3g027707 | 3:5,097,738-5,104,858 | + | C1H3g28595 | C2H3g02047 | LOC_Os03g11120 | Os03g0209600 | - | Detail |
| CX3g029679 | 3:5,105,801-5,108,916 | + | C1H3g28031 | C2H3g27933 | LOC_Os03g15190 | Os03g0209700 | - | Detail |
| CX3g026421 | 3:5,111,803-5,121,928 | + | C1H3g31436 | C2H3g21412 | LOC_Os03g11140 | Os03g0209800 | - | Detail |
| CX3g027593 | 3:5,126,190-5,126,528 | - | C1H3g26339 | C2H3g16472 | LOC_Os03g11160 | Os03g0210000 | - | Detail |
| CX3g025375 | 3:5,128,687-5,129,040 | - | C1H3g24055 | C2H3g27277 | LOC_Os03g11170 | Os03g0210100 | - | Detail |
| CX3g024954 | 3:5,129,670-5,130,456 | + | - | - | LOC_Os03g11430 | - | - | Detail |
| CX3g028377 | 3:5,131,440-5,131,796 | - | C1H3g27613 | C2H3g18125 | LOC_Os03g11180 | Os03g0210200 | - | Detail |
| CX3g029308 | 3:5,135,678-5,141,736 | - | C1H3g13004 | C2H3g21913 | LOC_Os03g11200 | Os03g0210400 | - | Detail |
| CX3g027935 | 3:5,143,066-5,143,290 | - | - | - | - | Os03g0606466 | - | Detail |
| CX3g030415 | 3:5,145,410-5,147,641 | + | C1H3g15282 | C2H3g25075 | LOC_Os03g11210 | Os03g0210500 | - | Detail |
| CX3g031148 | 3:5,150,413-5,151,558 | - | C1H3g18916 | C2H3g24832 | LOC_Os03g11220 | Os03g0210600 | - | Detail |
| CX3g025909 | 3:5,152,360-5,153,348 | + | C1H3g29587 | C2H3g17169 | LOC_Os03g11230 | Os03g0210700 | - | Detail |
| CX3g029919 | 3:5,155,984-5,163,146 | - | C1H3g28959 | C2H3g29083 | LOC_Os03g11240 | Os03g0210800 | - | Detail |
| CX3g028792 | 3:5,167,868-5,168,346 | + | C1H3g06712 | C2H3g10848 | LOC_Os03g11250 | Os03g0210900 | - | Detail |
| CX3g028627 | 3:5,171,518-5,173,228 | + | C1H3g11024 | C2H3g14713 | LOC_Os03g11260 | Os03g0211100 | - | Detail |
| CX3g028711 | 3:5,184,563-5,186,869 | + | - | C2H3g08476 | LOC_Os03g11290 | Os03g0211400 | - | Detail |
| CX3g028056 | 3:5,187,823-5,189,879 | - | C1H3g14759 | C2H3g19439 | LOC_Os03g11300 | Os03g0211500 | - | Detail |