| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g23030 | 4:12,848,083-12,849,457 | - | C1H4g19496 | - | - | - | - | Detail |
| C2H4g00602 | 4:12,850,259-12,850,605 | - | C1H4g08388 | CX4g036087 | LOC_Os04g25740 | Os04g0314500 | - | Detail |
| C2H4g19204 | 4:12,858,513-12,859,484 | - | - | - | - | - | - | Detail |
| C2H4g15697 | 4:12,895,850-12,897,223 | + | C1H4g03848 | - | - | - | - | Detail |
| C2H4g29155 | 4:12,916,944-12,918,535 | + | C1H4g11483 | CX4g033259 | LOC_Os04g25140 | Os04g0316800 | - | Detail |
| C2H4g06744 | 4:12,919,272-12,920,661 | + | - | - | - | - | - | Detail |
| C2H4g17736 | 4:12,922,511-12,926,374 | + | - | CX4g036636 | LOC_Os08g23280 | - | - | Detail |
| C2H4g17585 | 4:12,938,735-12,939,963 | + | C1H4g23443 | CX4g034186 | LOC_Os04g25140 | Os04g0317300 | - | Detail |
| C2H4g06583 | 4:13,086,602-13,089,303 | + | C1H4g27437 | - | LOC_Os04g25360 | Os04g0319600 | - | Detail |
| C2H4g27440 | 4:13,091,166-13,092,677 | + | C1H4g01135 | CX4g032327 | LOC_Os04g25980 | Os04g0319700 | - | Detail |
| C2H4g14364 | 4:13,102,100-13,103,614 | + | C1H4g27404 | CX4g036582 | LOC_Os04g25380 | Os04g0319800 | - | Detail |
| C2H4g16249 | 4:13,104,369-13,113,257 | - | C1H4g11765 | CX4g034067 | LOC_Os04g25960 | Os04g0326000 | - | Detail |
| C2H4g13198 | 4:13,121,456-13,126,802 | + | C1H4g08601 | CX4g034663 | LOC_Os04g25400 | Os04g0320100 | OsHCAR | Detail |
| C2H4g23070 | 4:13,127,494-13,130,993 | - | C1H4g12613 | CX4g033316 | LOC_Os04g25410 | Os04g0320200 | - | Detail |
| C2H4g15158 | 4:13,156,262-13,157,832 | - | C1H4g07570 | CX4g036503 | LOC_Os04g25440 | Os04g0320700 | - | Detail |
| C2H4g21449 | 4:13,168,002-13,170,110 | + | C1H4g16139 | CX4g034511 | LOC_Os04g25490 | Os04g0320700 | - | Detail |
| C2H4g08941 | 4:13,181,718-13,182,491 | + | C1H4g05580 | CX4g034960 | LOC_Os04g25540 | Os04g0321500 | mtRPL27a, S28 | Detail |
| C2H4g14101 | 4:13,183,982-13,189,739 | + | C1H4g01277 | - | - | - | - | Detail |
| C2H4g20494 | 4:13,189,924-13,194,569 | - | C1H4g13430 | CX4g033520 | LOC_Os04g25560 | Os04g0321700 | - | Detail |
| C2H4g04631 | 4:13,197,873-13,198,361 | - | C1H4g19422 | CX4g035269 | LOC_Os04g25570 | Os04g0609600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029010 | 3:4,938,374-4,942,486 | - | C1H3g13621 | C2H3g12127 | LOC_Os03g10820 | Os03g0762900 | - | Detail |
| CX3g029900 | 3:4,948,232-4,948,381 | - | - | - | - | - | - | Detail |
| CX3g031089 | 3:4,949,729-4,949,941 | - | - | - | - | - | - | Detail |
| CX3g025706 | 3:4,959,021-4,963,569 | - | C1H3g08320 | C2H3g24955 | LOC_Os03g10850 | Os03g0206201 | - | Detail |
| CX3g025216 | 3:4,977,018-4,979,489 | + | C1H3g23004 | C2H3g30671 | LOC_Os03g10870 | Os03g0206600 | - | Detail |
| CX3g028250 | 3:4,980,917-4,983,435 | - | C1H3g06410 | C2H3g08057 | LOC_Os03g10880 | Os03g0206700 | - | Detail |
| CX3g028910 | 3:4,985,001-4,986,853 | + | C1H3g27718 | C2H3g20915 | LOC_Os03g10890 | Os03g0206900 | - | Detail |
| CX3g026802 | 3:5,006,225-5,007,834 | - | C1H3g00893 | C2H3g10611 | LOC_Os03g10920 | Os03g0207200 | - | Detail |
| CX3g025332 | 3:5,008,783-5,010,441 | - | C1H3g01133 | C2H3g21091 | LOC_Os03g10930 | Os03g0207250 | - | Detail |
| CX3g026481 | 3:5,011,435-5,015,892 | - | C1H3g28849 | C2H3g16402 | LOC_Os03g10940 | Os03g0207300 | - | Detail |
| CX3g029049 | 3:5,017,606-5,019,882 | - | - | - | - | - | - | Detail |
| CX3g026300 | 3:5,024,249-5,025,598 | + | C1H3g06136 | C2H3g22551 | LOC_Os03g10950 | Os03g0207400 | - | Detail |
| CX3g028734 | 3:5,030,047-5,032,298 | + | C1H3g30385 | C2H3g27737 | LOC_Os03g10980 | Os03g0207800 | - | Detail |
| CX3g029045 | 3:5,035,132-5,038,486 | - | C1H3g09911 | C2H3g03380 | LOC_Os03g10990 | Os03g0207900 | - | Detail |
| CX3g026306 | 3:5,040,273-5,043,826 | - | C1H3g06609 | C2H3g00163 | LOC_Os03g11010 | Os03g0208500 | NRAMP2, OsNramp2, OsNRAMP2 | Detail |
| CX3g026296 | 3:5,058,724-5,060,316 | + | C1H3g30012 | C2H3g10069 | LOC_Os03g11020 | Os03g0208600 | - | Detail |
| CX3g026122 | 3:5,062,512-5,065,416 | + | C1H3g13525 | C2H3g05594 | LOC_Os03g11030 | Os03g0208700 | - | Detail |
| CX3g030551 | 3:5,067,323-5,070,165 | + | C1H3g23847 | C2H3g02775 | LOC_Os03g11040 | Os03g0208800 | - | Detail |
| CX3g025131 | 3:5,070,995-5,075,212 | - | C1H3g19795 | C2H3g21926 | LOC_Os03g11050 | Os03g0208900 | - | Detail |
| CX3g026202 | 3:5,076,834-5,077,307 | + | C1H3g29509 | C2H3g02600 | LOC_Os03g11060 | Os03g0209000 | - | Detail |