| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g27058 | 1:22,384,772-22,386,355 | - | C1H1g11259 | CX1g001039 | LOC_Os01g43550 | Os01g0624700 | OsWRKY03, OsWRKY12 | Detail |
| C2H1g20706 | 1:22,397,701-22,401,939 | + | C1H1g00319 | CX1g003323 | LOC_Os01g43580 | Os01g0625200 | - | Detail |
| C2H1g04036 | 1:22,406,624-22,407,725 | + | C1H1g14466 | CX1g003980 | LOC_Os01g43590 | Os01g0625300 | - | Detail |
| C2H1g20132 | 1:22,418,099-22,418,914 | + | C1H1g26404 | - | - | - | - | Detail |
| C2H1g15171 | 1:22,428,869-22,431,655 | - | C1H1g17074 | - | LOC_Os01g43620 | - | - | Detail |
| C2H1g15343 | 1:22,435,613-22,436,006 | - | C1H1g17074 | - | - | - | - | Detail |
| C2H1g29248 | 1:22,436,126-22,444,816 | + | C1H1g10500 | CX1g004459 | LOC_Os01g43630 | Os01g0626200 | - | Detail |
| C2H1g04282 | 1:22,445,801-22,446,416 | - | C1H1g23387 | CX1g003074 | - | Os01g0626300 | - | Detail |
| C2H1g17198 | 1:22,451,007-22,453,241 | + | C1H1g04034 | CX1g001615 | LOC_Os01g43650 | Os01g0626400 | WRKY11, OsWRKY11.2 | Detail |
| C2H1g05125 | 1:22,463,980-22,466,094 | + | C1H1g09859 | CX1g004444 | LOC_Os01g43670 | Os01g0155000 | - | Detail |
| C2H1g12925 | 1:22,468,084-22,476,525 | - | - | - | - | - | - | Detail |
| C2H1g04147 | 1:22,476,887-22,479,774 | + | C1H1g01575 | CX1g002724 | LOC_Os01g43700 | Os01g0627400 | - | Detail |
| C2H1g19850 | 1:22,481,631-22,485,305 | - | C1H1g28702 | CX1g002724 | LOC_Os01g43710 | Os01g0627500 | - | Detail |
| C2H1g29868 | 1:22,492,974-22,494,961 | - | C1H1g03097 | CX1g006577 | LOC_Os01g43720 | Os01g0627600 | - | Detail |
| C2H1g22502 | 1:22,498,248-22,502,159 | + | C1H1g04951 | CX1g002724 | LOC_Os01g43740 | Os01g0627800 | - | Detail |
| C2H1g27924 | 1:22,505,575-22,507,478 | + | C1H1g09293 | CX1g005051 | LOC_Os01g43750 | Os01g0627900 | - | Detail |
| C2H1g24978 | 1:22,509,995-22,511,966 | + | C1H1g25990 | CX1g005051 | LOC_Os01g43750 | Os01g0627900 | - | Detail |
| C2H1g07157 | 1:22,515,681-22,517,744 | + | C1H1g21900 | CX1g006577 | LOC_Os01g43774 | Os01g0628000 | - | Detail |
| C2H1g04659 | 1:22,534,549-22,538,745 | + | C1H1g21541 | CX1g003827 | LOC_Os01g43844 | Os01g0628700 | - | Detail |
| C2H1g09539 | 1:22,540,668-22,542,685 | + | C1H1g06376 | CX1g003827 | LOC_Os01g43851 | Os01g0628900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029010 | 3:4,938,374-4,942,486 | - | C1H3g13621 | C2H3g12127 | LOC_Os03g10820 | Os03g0762900 | - | Detail |
| CX3g029900 | 3:4,948,232-4,948,381 | - | - | - | - | - | - | Detail |
| CX3g031089 | 3:4,949,729-4,949,941 | - | - | - | - | - | - | Detail |
| CX3g025706 | 3:4,959,021-4,963,569 | - | C1H3g08320 | C2H3g24955 | LOC_Os03g10850 | Os03g0206201 | - | Detail |
| CX3g025216 | 3:4,977,018-4,979,489 | + | C1H3g23004 | C2H3g30671 | LOC_Os03g10870 | Os03g0206600 | - | Detail |
| CX3g028250 | 3:4,980,917-4,983,435 | - | C1H3g06410 | C2H3g08057 | LOC_Os03g10880 | Os03g0206700 | - | Detail |
| CX3g028910 | 3:4,985,001-4,986,853 | + | C1H3g27718 | C2H3g20915 | LOC_Os03g10890 | Os03g0206900 | - | Detail |
| CX3g026802 | 3:5,006,225-5,007,834 | - | C1H3g00893 | C2H3g10611 | LOC_Os03g10920 | Os03g0207200 | - | Detail |
| CX3g025332 | 3:5,008,783-5,010,441 | - | C1H3g01133 | C2H3g21091 | LOC_Os03g10930 | Os03g0207250 | - | Detail |
| CX3g026481 | 3:5,011,435-5,015,892 | - | C1H3g28849 | C2H3g16402 | LOC_Os03g10940 | Os03g0207300 | - | Detail |
| CX3g029049 | 3:5,017,606-5,019,882 | - | - | - | - | - | - | Detail |
| CX3g026300 | 3:5,024,249-5,025,598 | + | C1H3g06136 | C2H3g22551 | LOC_Os03g10950 | Os03g0207400 | - | Detail |
| CX3g028734 | 3:5,030,047-5,032,298 | + | C1H3g30385 | C2H3g27737 | LOC_Os03g10980 | Os03g0207800 | - | Detail |
| CX3g029045 | 3:5,035,132-5,038,486 | - | C1H3g09911 | C2H3g03380 | LOC_Os03g10990 | Os03g0207900 | - | Detail |
| CX3g026306 | 3:5,040,273-5,043,826 | - | C1H3g06609 | C2H3g00163 | LOC_Os03g11010 | Os03g0208500 | NRAMP2, OsNramp2, OsNRAMP2 | Detail |
| CX3g026296 | 3:5,058,724-5,060,316 | + | C1H3g30012 | C2H3g10069 | LOC_Os03g11020 | Os03g0208600 | - | Detail |
| CX3g026122 | 3:5,062,512-5,065,416 | + | C1H3g13525 | C2H3g05594 | LOC_Os03g11030 | Os03g0208700 | - | Detail |
| CX3g030551 | 3:5,067,323-5,070,165 | + | C1H3g23847 | C2H3g02775 | LOC_Os03g11040 | Os03g0208800 | - | Detail |
| CX3g025131 | 3:5,070,995-5,075,212 | - | C1H3g19795 | C2H3g21926 | LOC_Os03g11050 | Os03g0208900 | - | Detail |
| CX3g026202 | 3:5,076,834-5,077,307 | + | C1H3g29509 | C2H3g02600 | LOC_Os03g11060 | Os03g0209000 | - | Detail |