| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g20898 | 2:31,367,850-31,370,126 | - | C2H2g06439 | CX2g022953 | LOC_Os02g56150 | Os02g0805300 | - | Detail |
| C1H2g18555 | 2:31,373,176-31,375,483 | - | C2H2g01737 | CX2g022826 | LOC_Os02g56170 | Os02g0805500 | - | Detail |
| C1H2g30498 | 2:31,378,367-31,380,618 | + | C2H2g08494 | CX2g020022 | LOC_Os02g56180 | Os02g0805600 | - | Detail |
| C1H2g02350 | 2:31,381,270-31,382,900 | - | C2H2g14716 | CX2g021343 | LOC_Os02g56190 | Os02g0805700 | - | Detail |
| C1H2g23840 | 2:31,383,258-31,389,303 | - | C2H2g17986 | CX2g020646 | LOC_Os02g56200 | Os02g0805800 | - | Detail |
| C1H2g23237 | 2:31,393,505-31,396,843 | - | C2H2g24720 | CX2g023787 | LOC_Os02g56210 | Os02g0805900 | - | Detail |
| C1H2g02510 | 2:31,397,085-31,401,094 | + | C2H2g30362 | CX2g019538 | LOC_Os02g56219 | Os02g0806000 | - | Detail |
| C1H2g15285 | 2:31,416,451-31,421,745 | + | C2H2g18959 | CX2g020018 | LOC_Os02g56250 | Os02g0645600 | - | Detail |
| C1H2g12003 | 2:31,423,263-31,424,279 | - | C2H2g08061 | CX2g023472 | LOC_Os02g56260 | Os02g0806500 | - | Detail |
| C1H2g24733 | 2:31,424,347-31,426,131 | - | C2H2g09745 | CX2g023472 | LOC_Os02g56260 | Os02g0806500 | - | Detail |
| C1H2g09037 | 2:31,429,378-31,435,106 | - | C2H2g16259 | CX2g020940 | LOC_Os02g56270 | Os02g0806600 | - | Detail |
| C1H2g15153 | 2:31,442,825-31,447,593 | - | C2H2g09054 | CX2g022386 | LOC_Os02g56280 | Os02g0806700 | - | Detail |
| C1H2g31054 | 2:31,459,697-31,463,803 | + | C2H2g30201 | CX2g020392 | LOC_Os02g56300 | Os02g0806900 | - | Detail |
| C1H2g07550 | 2:31,467,183-31,468,931 | - | C2H2g10670 | CX2g019216 | LOC_Os02g56310 | Os02g0807000 | - | Detail |
| C1H2g30707 | 2:31,475,748-31,483,317 | + | C2H2g10723 | CX2g020511 | LOC_Os02g56320 | Os02g0807100 | SSIV-3 | Detail |
| C1H2g23003 | 2:31,483,310-31,485,889 | - | C2H2g00256 | CX2g022097 | LOC_Os02g56350 | Os02g0807200 | - | Detail |
| C1H2g13515 | 2:31,494,431-31,497,365 | - | C2H2g07924 | CX2g020564 | LOC_Os02g56370 | Os02g0807800 | - | Detail |
| C1H2g00695 | 2:31,502,516-31,505,046 | - | C2H2g21237 | CX2g022097 | LOC_Os02g56380 | Os02g0807900 | - | Detail |
| C1H2g05480 | 2:31,508,096-31,510,573 | - | C2H2g00256 | CX2g022097 | LOC_Os02g56400 | Os02g0808100 | - | Detail |
| C1H2g01106 | 2:31,517,828-31,518,313 | - | C2H2g11198 | CX2g024895 | LOC_Os02g56680 | Os02g0811400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029010 | 3:4,938,374-4,942,486 | - | C1H3g13621 | C2H3g12127 | LOC_Os03g10820 | Os03g0762900 | - | Detail |
| CX3g029900 | 3:4,948,232-4,948,381 | - | - | - | - | - | - | Detail |
| CX3g031089 | 3:4,949,729-4,949,941 | - | - | - | - | - | - | Detail |
| CX3g025706 | 3:4,959,021-4,963,569 | - | C1H3g08320 | C2H3g24955 | LOC_Os03g10850 | Os03g0206201 | - | Detail |
| CX3g025216 | 3:4,977,018-4,979,489 | + | C1H3g23004 | C2H3g30671 | LOC_Os03g10870 | Os03g0206600 | - | Detail |
| CX3g028250 | 3:4,980,917-4,983,435 | - | C1H3g06410 | C2H3g08057 | LOC_Os03g10880 | Os03g0206700 | - | Detail |
| CX3g028910 | 3:4,985,001-4,986,853 | + | C1H3g27718 | C2H3g20915 | LOC_Os03g10890 | Os03g0206900 | - | Detail |
| CX3g026802 | 3:5,006,225-5,007,834 | - | C1H3g00893 | C2H3g10611 | LOC_Os03g10920 | Os03g0207200 | - | Detail |
| CX3g025332 | 3:5,008,783-5,010,441 | - | C1H3g01133 | C2H3g21091 | LOC_Os03g10930 | Os03g0207250 | - | Detail |
| CX3g026481 | 3:5,011,435-5,015,892 | - | C1H3g28849 | C2H3g16402 | LOC_Os03g10940 | Os03g0207300 | - | Detail |
| CX3g029049 | 3:5,017,606-5,019,882 | - | - | - | - | - | - | Detail |
| CX3g026300 | 3:5,024,249-5,025,598 | + | C1H3g06136 | C2H3g22551 | LOC_Os03g10950 | Os03g0207400 | - | Detail |
| CX3g028734 | 3:5,030,047-5,032,298 | + | C1H3g30385 | C2H3g27737 | LOC_Os03g10980 | Os03g0207800 | - | Detail |
| CX3g029045 | 3:5,035,132-5,038,486 | - | C1H3g09911 | C2H3g03380 | LOC_Os03g10990 | Os03g0207900 | - | Detail |
| CX3g026306 | 3:5,040,273-5,043,826 | - | C1H3g06609 | C2H3g00163 | LOC_Os03g11010 | Os03g0208500 | NRAMP2, OsNramp2, OsNRAMP2 | Detail |
| CX3g026296 | 3:5,058,724-5,060,316 | + | C1H3g30012 | C2H3g10069 | LOC_Os03g11020 | Os03g0208600 | - | Detail |
| CX3g026122 | 3:5,062,512-5,065,416 | + | C1H3g13525 | C2H3g05594 | LOC_Os03g11030 | Os03g0208700 | - | Detail |
| CX3g030551 | 3:5,067,323-5,070,165 | + | C1H3g23847 | C2H3g02775 | LOC_Os03g11040 | Os03g0208800 | - | Detail |
| CX3g025131 | 3:5,070,995-5,075,212 | - | C1H3g19795 | C2H3g21926 | LOC_Os03g11050 | Os03g0208900 | - | Detail |
| CX3g026202 | 3:5,076,834-5,077,307 | + | C1H3g29509 | C2H3g02600 | LOC_Os03g11060 | Os03g0209000 | - | Detail |