| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g30841 | 2:25,332,907-25,337,732 | - | C2H2g29807 | CX2g020078 | LOC_Os02g45090 | Os02g0672400 | - | Detail |
| C1H2g09721 | 2:25,341,076-25,344,998 | + | C2H2g23823 | CX2g022558 | LOC_Os02g45110 | Os02g0672600 | OsMTA2 | Detail |
| C1H2g17265 | 2:25,347,647-25,347,853 | + | C2H2g27864 | CX2g020462 | - | Os02g0672700 | - | Detail |
| C1H2g06794 | 2:25,349,614-25,354,227 | - | C2H2g19722 | CX2g020387 | LOC_Os02g45130 | Os02g0672800 | - | Detail |
| C1H2g28086 | 2:25,362,832-25,363,543 | + | C2H2g29141 | CX2g019881 | LOC_Os02g45160 | Os02g0673100 | - | Detail |
| C1H2g27166 | 2:25,366,937-25,369,279 | - | C2H2g27637 | CX2g020832 | LOC_Os02g45160 | Os02g0673100 | - | Detail |
| C1H2g11887 | 2:25,393,683-25,398,977 | + | C2H2g10348 | CX2g024161 | LOC_Os02g45170 | Os02g0673500 | OsLHW | Detail |
| C1H2g28162 | 2:25,401,753-25,406,175 | + | C2H2g28406 | CX2g021906 | LOC_Os02g45180 | Os02g0673600 | - | Detail |
| C1H2g16674 | 2:25,415,052-25,417,241 | - | C2H2g24261 | CX2g022483 | LOC_Os02g45200 | Os02g0673700 | - | Detail |
| C1H2g05896 | 2:25,448,292-25,452,649 | - | C2H2g23214 | CX2g023908 | LOC_Os02g45240 | Os02g0674700 | - | Detail |
| C1H2g12604 | 2:25,456,007-25,463,000 | - | C2H2g16050 | CX2g020562 | LOC_Os02g45250 | Os02g0674800 | Roc5 | Detail |
| C1H2g01193 | 2:25,470,731-25,471,202 | - | C2H2g05987 | CX2g019919 | - | - | - | Detail |
| C1H2g22262 | 2:25,472,584-25,476,413 | - | C2H2g12523 | CX2g019242 | LOC_Os02g45280 | Os02g0675400 | - | Detail |
| C1H2g25338 | 2:25,493,668-25,497,504 | - | C2H2g11582 | CX2g019003 | LOC_Os02g45310 | Os02g0675700 | - | Detail |
| C1H2g01857 | 2:25,511,469-25,514,373 | + | C2H2g05906 | CX2g019886 | LOC_Os02g45320 | Os02g0675800 | - | Detail |
| C1H2g28776 | 2:25,525,571-25,533,418 | + | C2H2g02666 | CX2g020935 | LOC_Os02g45344 | Os02g0676000 | - | Detail |
| C1H2g12382 | 2:25,548,133-25,548,555 | + | C2H2g27821 | - | - | - | - | Detail |
| C1H2g30126 | 2:25,554,247-25,557,975 | + | C2H2g20409 | CX2g021678 | LOC_Os02g45390 | Os02g0676500 | - | Detail |
| C1H2g18536 | 2:25,568,799-25,569,584 | + | C2H2g15785 | CX2g019396 | LOC_Os02g45420 | Os02g0676800 | - | Detail |
| C1H2g13248 | 2:25,600,859-25,601,796 | - | C2H2g14222 | CX2g023525 | LOC_Os02g45460 | Os02g0677600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029010 | 3:4,938,374-4,942,486 | - | C1H3g13621 | C2H3g12127 | LOC_Os03g10820 | Os03g0762900 | - | Detail |
| CX3g029900 | 3:4,948,232-4,948,381 | - | - | - | - | - | - | Detail |
| CX3g031089 | 3:4,949,729-4,949,941 | - | - | - | - | - | - | Detail |
| CX3g025706 | 3:4,959,021-4,963,569 | - | C1H3g08320 | C2H3g24955 | LOC_Os03g10850 | Os03g0206201 | - | Detail |
| CX3g025216 | 3:4,977,018-4,979,489 | + | C1H3g23004 | C2H3g30671 | LOC_Os03g10870 | Os03g0206600 | - | Detail |
| CX3g028250 | 3:4,980,917-4,983,435 | - | C1H3g06410 | C2H3g08057 | LOC_Os03g10880 | Os03g0206700 | - | Detail |
| CX3g028910 | 3:4,985,001-4,986,853 | + | C1H3g27718 | C2H3g20915 | LOC_Os03g10890 | Os03g0206900 | - | Detail |
| CX3g026802 | 3:5,006,225-5,007,834 | - | C1H3g00893 | C2H3g10611 | LOC_Os03g10920 | Os03g0207200 | - | Detail |
| CX3g025332 | 3:5,008,783-5,010,441 | - | C1H3g01133 | C2H3g21091 | LOC_Os03g10930 | Os03g0207250 | - | Detail |
| CX3g026481 | 3:5,011,435-5,015,892 | - | C1H3g28849 | C2H3g16402 | LOC_Os03g10940 | Os03g0207300 | - | Detail |
| CX3g029049 | 3:5,017,606-5,019,882 | - | - | - | - | - | - | Detail |
| CX3g026300 | 3:5,024,249-5,025,598 | + | C1H3g06136 | C2H3g22551 | LOC_Os03g10950 | Os03g0207400 | - | Detail |
| CX3g028734 | 3:5,030,047-5,032,298 | + | C1H3g30385 | C2H3g27737 | LOC_Os03g10980 | Os03g0207800 | - | Detail |
| CX3g029045 | 3:5,035,132-5,038,486 | - | C1H3g09911 | C2H3g03380 | LOC_Os03g10990 | Os03g0207900 | - | Detail |
| CX3g026306 | 3:5,040,273-5,043,826 | - | C1H3g06609 | C2H3g00163 | LOC_Os03g11010 | Os03g0208500 | NRAMP2, OsNramp2, OsNRAMP2 | Detail |
| CX3g026296 | 3:5,058,724-5,060,316 | + | C1H3g30012 | C2H3g10069 | LOC_Os03g11020 | Os03g0208600 | - | Detail |
| CX3g026122 | 3:5,062,512-5,065,416 | + | C1H3g13525 | C2H3g05594 | LOC_Os03g11030 | Os03g0208700 | - | Detail |
| CX3g030551 | 3:5,067,323-5,070,165 | + | C1H3g23847 | C2H3g02775 | LOC_Os03g11040 | Os03g0208800 | - | Detail |
| CX3g025131 | 3:5,070,995-5,075,212 | - | C1H3g19795 | C2H3g21926 | LOC_Os03g11050 | Os03g0208900 | - | Detail |
| CX3g026202 | 3:5,076,834-5,077,307 | + | C1H3g29509 | C2H3g02600 | LOC_Os03g11060 | Os03g0209000 | - | Detail |