| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g08216 | 9:9,439,248-9,439,987 | - | C2H9g30412 | CX9g057843 | LOC_Os09g18360 | Os09g0353200 | - | Detail |
| C1H9g09295 | 9:9,440,836-9,441,919 | - | C2H9g30412 | CX9g057843 | LOC_Os09g18360 | Os09g0353200 | - | Detail |
| C1H9g04955 | 9:9,454,547-9,456,631 | + | C2H9g08214 | CX9g055425 | LOC_Os09g18390 | Os09g0353400 | - | Detail |
| C1H9g29305 | 9:9,467,542-9,467,763 | + | C2H9g27520 | CX9g055425 | LOC_Os09g18520 | Os09g0354300 | - | Detail |
| C1H9g07758 | 9:9,475,327-9,476,052 | + | C2H9g11760 | CX9g055968 | LOC_Os09g18450 | Os09g0353700 | - | Detail |
| C1H9g19178 | 9:9,479,448-9,481,196 | + | C2H9g08714 | CX9g055968 | LOC_Os09g18450 | Os09g0354100 | - | Detail |
| C1H9g30762 | 9:9,486,955-9,488,698 | - | C2H9g08214 | CX9g055425 | LOC_Os09g18520 | Os09g0354300 | - | Detail |
| C1H9g24256 | 9:9,498,867-9,501,779 | - | C2H9g09770 | CX9g056896 | LOC_Os09g18530 | Os09g0355400 | - | Detail |
| C1H9g24532 | 9:9,502,391-9,502,837 | - | C2H9g15417 | CX9g055165 | LOC_Os09g18540 | Os09g0349600 | - | Detail |
| C1H9g06855 | 9:9,508,255-9,509,735 | - | C2H9g16060 | CX9g055165 | LOC_Os09g18620 | Os09g0356200 | - | Detail |
| C1H9g22899 | 9:9,551,698-9,554,089 | + | C2H9g15103 | CX9g057944 | LOC_Os09g19400 | Os09g0358700 | OsCBM1, OsMRLP15 | Detail |
| C1H9g12366 | 9:9,556,269-9,558,506 | + | C2H9g27713 | CX9g057944 | LOC_Os09g19350 | Os09g0358000 | - | Detail |
| C1H9g27368 | 9:9,564,634-9,574,634 | + | C2H9g01105 | CX3g029985 | - | - | - | Detail |
| C1H9g19813 | 9:9,574,717-9,576,498 | + | C2H9g01105 | - | - | - | - | Detail |
| C1H9g15807 | 9:9,606,819-9,610,207 | + | C2H9g12232 | CX9g055760 | LOC_Os09g18594 | Os09g0356200 | - | Detail |
| C1H9g10170 | 9:9,636,050-9,644,685 | + | C2H9g04161 | CX9g057284 | LOC_Os09g18594 | Os09g0356200 | - | Detail |
| C1H9g09829 | 9:9,636,581-9,645,430 | - | - | - | - | - | - | Detail |
| C1H9g21628 | 9:9,654,581-9,660,202 | + | C2H9g24070 | CX9g057284 | LOC_Os09g18594 | Os09g0355400 | - | Detail |
| C1H9g09637 | 9:9,672,320-9,675,940 | - | C2H9g00341 | CX9g057245 | LOC_Os09g19280 | Os09g0357400 | - | Detail |
| C1H9g20757 | 9:9,694,729-9,696,882 | - | C2H9g00341 | CX9g057245 | LOC_Os09g19330 | Os09g0357400 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029010 | 3:4,938,374-4,942,486 | - | C1H3g13621 | C2H3g12127 | LOC_Os03g10820 | Os03g0762900 | - | Detail |
| CX3g029900 | 3:4,948,232-4,948,381 | - | - | - | - | - | - | Detail |
| CX3g031089 | 3:4,949,729-4,949,941 | - | - | - | - | - | - | Detail |
| CX3g025706 | 3:4,959,021-4,963,569 | - | C1H3g08320 | C2H3g24955 | LOC_Os03g10850 | Os03g0206201 | - | Detail |
| CX3g025216 | 3:4,977,018-4,979,489 | + | C1H3g23004 | C2H3g30671 | LOC_Os03g10870 | Os03g0206600 | - | Detail |
| CX3g028250 | 3:4,980,917-4,983,435 | - | C1H3g06410 | C2H3g08057 | LOC_Os03g10880 | Os03g0206700 | - | Detail |
| CX3g028910 | 3:4,985,001-4,986,853 | + | C1H3g27718 | C2H3g20915 | LOC_Os03g10890 | Os03g0206900 | - | Detail |
| CX3g026802 | 3:5,006,225-5,007,834 | - | C1H3g00893 | C2H3g10611 | LOC_Os03g10920 | Os03g0207200 | - | Detail |
| CX3g025332 | 3:5,008,783-5,010,441 | - | C1H3g01133 | C2H3g21091 | LOC_Os03g10930 | Os03g0207250 | - | Detail |
| CX3g026481 | 3:5,011,435-5,015,892 | - | C1H3g28849 | C2H3g16402 | LOC_Os03g10940 | Os03g0207300 | - | Detail |
| CX3g029049 | 3:5,017,606-5,019,882 | - | - | - | - | - | - | Detail |
| CX3g026300 | 3:5,024,249-5,025,598 | + | C1H3g06136 | C2H3g22551 | LOC_Os03g10950 | Os03g0207400 | - | Detail |
| CX3g028734 | 3:5,030,047-5,032,298 | + | C1H3g30385 | C2H3g27737 | LOC_Os03g10980 | Os03g0207800 | - | Detail |
| CX3g029045 | 3:5,035,132-5,038,486 | - | C1H3g09911 | C2H3g03380 | LOC_Os03g10990 | Os03g0207900 | - | Detail |
| CX3g026306 | 3:5,040,273-5,043,826 | - | C1H3g06609 | C2H3g00163 | LOC_Os03g11010 | Os03g0208500 | NRAMP2, OsNramp2, OsNRAMP2 | Detail |
| CX3g026296 | 3:5,058,724-5,060,316 | + | C1H3g30012 | C2H3g10069 | LOC_Os03g11020 | Os03g0208600 | - | Detail |
| CX3g026122 | 3:5,062,512-5,065,416 | + | C1H3g13525 | C2H3g05594 | LOC_Os03g11030 | Os03g0208700 | - | Detail |
| CX3g030551 | 3:5,067,323-5,070,165 | + | C1H3g23847 | C2H3g02775 | LOC_Os03g11040 | Os03g0208800 | - | Detail |
| CX3g025131 | 3:5,070,995-5,075,212 | - | C1H3g19795 | C2H3g21926 | LOC_Os03g11050 | Os03g0208900 | - | Detail |
| CX3g026202 | 3:5,076,834-5,077,307 | + | C1H3g29509 | C2H3g02600 | LOC_Os03g11060 | Os03g0209000 | - | Detail |