| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H4g19571 | 4:27,753,541-27,758,724 | - | C1H4g15851 | CX4g031785 | LOC_Os04g53760 | Os04g0629700 | - | Detail |
| C2H4g13776 | 4:27,763,481-27,768,492 | + | C1H4g29594 | CX4g033909 | LOC_Os04g53770 | Os04g0630000 | - | Detail |
| C2H4g14842 | 4:27,769,089-27,770,276 | + | C1H4g26963 | - | LOC_Os04g53780 | Os04g0630100 | - | Detail |
| C2H4g05771 | 4:27,770,282-27,770,546 | + | C1H4g05143 | - | LOC_Os04g53780 | Os04g0630100 | - | Detail |
| C2H4g01017 | 4:27,770,719-27,771,243 | + | C1H4g17189 | - | LOC_Os04g53800 | Os04g0630300 | - | Detail |
| C2H4g09464 | 4:27,771,277-27,771,480 | + | C1H4g12453 | - | LOC_Os04g53800 | Os04g0630300 | - | Detail |
| C2H4g11838 | 4:27,773,127-27,779,615 | + | C1H4g10023 | - | LOC_Os04g53800 | Os04g0630300 | - | Detail |
| C2H4g17007 | 4:27,781,986-27,783,574 | + | C1H4g09076 | - | LOC_Os04g53810 | Os04g0630400 | - | Detail |
| C2H4g28555 | 4:27,786,632-27,786,831 | + | C1H4g26963 | - | LOC_Os04g53850 | Os04g0630800 | - | Detail |
| C2H4g05751 | 4:27,789,840-27,791,830 | + | C1H4g26963 | - | LOC_Os04g53850 | Os04g0630800 | - | Detail |
| C2H4g23977 | 4:27,794,987-27,797,288 | + | C1H4g07842 | - | LOC_Os04g53920 | Os04g0631000 | - | Detail |
| C2H4g15838 | 4:27,804,049-27,804,836 | + | C1H4g25664 | - | LOC_Os04g53920 | Os04g0631000 | - | Detail |
| C2H4g15888 | 4:27,807,222-27,810,287 | + | C1H4g30584 | CX4g036083 | LOC_Os04g53930 | Os04g0631100 | - | Detail |
| C2H4g16028 | 4:27,814,833-27,816,587 | + | C1H4g13315 | CX4g032189 | LOC_Os04g53950 | Os04g0604300 | - | Detail |
| C2H4g23895 | 4:27,832,161-27,834,714 | + | C1H4g05962 | CX4g032512 | LOC_Os04g53990 | Os04g0631600 | OsbHLH068 | Detail |
| C2H4g25252 | 4:27,838,694-27,843,209 | - | C1H4g04717 | CX9g057667 | LOC_Os04g53994 | Os04g0631800 | SDK6 | Detail |
| C2H4g17958 | 4:27,845,705-27,847,858 | - | C1H4g22937 | - | LOC_Os04g53998 | Os04g0632100 | SDK7 | Detail |
| C2H4g00002 | 4:27,847,932-27,848,513 | - | C1H4g03233 | CX9g057667 | LOC_Os04g53998 | Os04g0632100 | SDK7 | Detail |
| C2H4g00097 | 4:27,850,251-27,850,781 | + | C1H4g18088 | - | - | - | - | Detail |
| C2H4g05602 | 4:27,851,007-27,851,551 | - | C1H4g19935 | - | LOC_Os04g53996 | Os04g0633800 | SDK9 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025008 | 3:4,740,003-4,742,719 | + | C1H3g08866 | C2H3g27684 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| CX3g027908 | 3:4,743,345-4,750,659 | - | C1H3g22443 | C2H3g07444 | LOC_Os03g10469 | Os03g0201901 | - | Detail |
| CX3g028036 | 3:4,756,361-4,759,942 | - | C1H3g14443 | C2H3g09161 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| CX3g026152 | 3:4,762,351-4,765,549 | - | C1H3g22113 | C2H3g24025 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| CX3g030169 | 3:4,766,686-4,770,652 | - | C1H3g27837 | C2H3g13194 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| CX3g025689 | 3:4,772,375-4,775,132 | - | C1H3g27666 | C2H3g17561 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| CX3g029844 | 3:4,775,363-4,784,510 | + | C1H3g27625 | C2H3g21513 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| CX3g027943 | 3:4,797,476-4,798,523 | + | C1H3g03653 | C2H3g08169 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| CX3g027605 | 3:4,809,027-4,815,254 | + | C1H3g22146 | C2H3g27974 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| CX3g028482 | 3:4,817,646-4,819,123 | - | C1H3g29891 | C2H3g08201 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| CX3g026677 | 3:4,838,478-4,842,417 | + | C1H3g06442 | C2H3g30001 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| CX3g029117 | 3:4,846,363-4,847,552 | + | C1H3g30369 | C2H3g23547 | LOC_Os03g10730 | - | - | Detail |
| CX3g030767 | 3:4,866,248-4,868,287 | + | C1H3g16112 | C2H3g07827 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| CX3g025287 | 3:4,872,132-4,872,544 | - | - | C2H3g08469 | - | - | - | Detail |
| CX3g028803 | 3:4,876,103-4,881,621 | - | C1H3g13244 | C2H3g17885 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| CX3g030429 | 3:4,888,732-4,890,152 | - | C1H3g10116 | C2H3g22270 | LOC_Os03g10770 | Os03g0205300 | - | Detail |
| CX3g028760 | 3:4,898,012-4,905,844 | + | C1H3g09266 | C2H3g01278 | LOC_Os03g10780 | Os03g0205400 | - | Detail |
| CX3g029451 | 3:4,906,864-4,911,525 | + | C1H3g14529 | C2H3g28949 | LOC_Os03g10790 | Os03g0205500 | - | Detail |
| CX3g026705 | 3:4,921,739-4,924,563 | + | C1H3g24511 | C2H3g29987 | LOC_Os03g10800 | Os03g0205700 | - | Detail |
| CX3g029670 | 3:4,929,923-4,931,389 | - | C1H3g03568 | C2H3g05398 | LOC_Os03g10810 | Os03g0205800 | HHC3 | Detail |