| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g03710 | 1:16,361,175-16,372,341 | - | C1H1g30538 | CX1g001585 | LOC_Os01g31870 | Os01g0503400 | - | Detail |
| C2H1g08008 | 1:16,382,271-16,382,919 | + | C1H1g06595 | CX1g001150 | LOC_Os01g31920 | - | - | Detail |
| C2H1g11121 | 1:16,406,072-16,413,072 | - | C1H1g01852 | CX1g003197 | LOC_Os01g31980 | Os01g0684900 | - | Detail |
| C2H1g17778 | 1:16,441,177-16,445,278 | + | C1H1g02771 | CX1g001358 | LOC_Os01g32080 | Os01g0505400 | - | Detail |
| C2H1g04751 | 1:16,453,604-16,455,893 | + | C1H1g20702 | CX1g000996 | LOC_Os01g32130 | Os01g0505700 | - | Detail |
| C2H1g26570 | 1:16,476,670-16,479,033 | + | C1H1g23126 | CX1g005476 | LOC_Os01g32170 | Os01g0506100 | OsSOAR1 | Detail |
| C2H1g29800 | 1:16,483,790-16,498,491 | - | C1H1g02660 | CX1g005140 | LOC_Os01g32184 | Os01g0506200 | - | Detail |
| C2H1g17425 | 1:16,521,821-16,525,026 | + | C1H1g06160 | CX1g003158 | LOC_Os01g32259 | - | - | Detail |
| C2H1g20888 | 1:16,550,811-16,554,225 | + | C1H1g14708 | CX1g001329 | LOC_Os01g32280 | Os01g0507300 | - | Detail |
| C2H1g26772 | 1:16,557,286-16,563,152 | + | C1H1g29043 | CX1g002600 | LOC_Os01g32300 | Os01g0507500 | - | Detail |
| C2H1g00298 | 1:16,568,750-16,569,268 | + | C1H1g19788 | CX1g002379 | LOC_Os10g33130 | Os01g0515300 | - | Detail |
| C2H1g17560 | 1:16,582,918-16,583,550 | + | C1H1g19941 | CX1g003291 | LOC_Os01g32330 | Os01g0507700 | - | Detail |
| C2H1g02648 | 1:16,588,134-16,593,835 | + | C1H1g02444 | CX1g000173 | LOC_Os01g32350 | Os01g0507900 | - | Detail |
| C2H1g18654 | 1:16,597,259-16,606,046 | + | C1H1g29270 | CX1g003736 | LOC_Os01g32364 | Os01g0508000 | - | Detail |
| C2H1g13741 | 1:16,655,931-16,657,847 | + | C1H1g14681 | CX1g003494 | - | - | - | Detail |
| C2H1g19341 | 1:16,721,440-16,724,637 | + | C1H1g15462 | CX1g001437 | LOC_Os01g32640 | Os01g0509900 | - | Detail |
| C2H1g03532 | 1:16,737,676-16,742,714 | + | C1H1g09530 | CX1g000669 | LOC_Os01g32660 | Os01g0510100 | OsMKK6, OsMEK1 | Detail |
| C2H1g05772 | 1:16,753,661-16,768,129 | + | C1H1g03786 | CX1g001061 | LOC_Os01g32710 | Os01g0510500 | - | Detail |
| C2H1g08671 | 1:16,769,024-16,772,790 | - | C1H1g15241 | CX1g004721 | LOC_Os01g32730 | Os01g0510600 | OsFLU1, OXP | Detail |
| C2H1g26446 | 1:16,781,312-16,789,002 | - | C1H1g26631 | CX1g000908 | LOC_Os01g32750 | Os01g0510800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025008 | 3:4,740,003-4,742,719 | + | C1H3g08866 | C2H3g27684 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| CX3g027908 | 3:4,743,345-4,750,659 | - | C1H3g22443 | C2H3g07444 | LOC_Os03g10469 | Os03g0201901 | - | Detail |
| CX3g028036 | 3:4,756,361-4,759,942 | - | C1H3g14443 | C2H3g09161 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| CX3g026152 | 3:4,762,351-4,765,549 | - | C1H3g22113 | C2H3g24025 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| CX3g030169 | 3:4,766,686-4,770,652 | - | C1H3g27837 | C2H3g13194 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| CX3g025689 | 3:4,772,375-4,775,132 | - | C1H3g27666 | C2H3g17561 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| CX3g029844 | 3:4,775,363-4,784,510 | + | C1H3g27625 | C2H3g21513 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| CX3g027943 | 3:4,797,476-4,798,523 | + | C1H3g03653 | C2H3g08169 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| CX3g027605 | 3:4,809,027-4,815,254 | + | C1H3g22146 | C2H3g27974 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| CX3g028482 | 3:4,817,646-4,819,123 | - | C1H3g29891 | C2H3g08201 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| CX3g026677 | 3:4,838,478-4,842,417 | + | C1H3g06442 | C2H3g30001 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| CX3g029117 | 3:4,846,363-4,847,552 | + | C1H3g30369 | C2H3g23547 | LOC_Os03g10730 | - | - | Detail |
| CX3g030767 | 3:4,866,248-4,868,287 | + | C1H3g16112 | C2H3g07827 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| CX3g025287 | 3:4,872,132-4,872,544 | - | - | C2H3g08469 | - | - | - | Detail |
| CX3g028803 | 3:4,876,103-4,881,621 | - | C1H3g13244 | C2H3g17885 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| CX3g030429 | 3:4,888,732-4,890,152 | - | C1H3g10116 | C2H3g22270 | LOC_Os03g10770 | Os03g0205300 | - | Detail |
| CX3g028760 | 3:4,898,012-4,905,844 | + | C1H3g09266 | C2H3g01278 | LOC_Os03g10780 | Os03g0205400 | - | Detail |
| CX3g029451 | 3:4,906,864-4,911,525 | + | C1H3g14529 | C2H3g28949 | LOC_Os03g10790 | Os03g0205500 | - | Detail |
| CX3g026705 | 3:4,921,739-4,924,563 | + | C1H3g24511 | C2H3g29987 | LOC_Os03g10800 | Os03g0205700 | - | Detail |
| CX3g029670 | 3:4,929,923-4,931,389 | - | C1H3g03568 | C2H3g05398 | LOC_Os03g10810 | Os03g0205800 | HHC3 | Detail |