| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02353 | 1:11,674,300-11,679,910 | + | C1H1g28713 | CX1g000663 | LOC_Os01g24060 | Os01g0343200 | - | Detail |
| C2H1g26949 | 1:11,685,554-11,687,349 | + | C1H1g18384 | CX1g001080 | LOC_Os01g24070 | Os01g0343300 | OsGATA8 | Detail |
| C2H1g05738 | 1:11,696,982-11,699,421 | - | C1H1g01015 | CX1g003896 | LOC_Os01g24090 | Os01g0343500 | - | Detail |
| C2H1g07085 | 1:11,827,376-11,830,076 | + | - | - | LOC_Os01g27449 | Os01g0372100 | - | Detail |
| C2H1g16748 | 1:11,899,919-11,901,719 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g05112 | 1:11,937,505-11,943,811 | + | C1H1g27449 | CX1g005895 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g30571 | 1:11,948,445-11,952,134 | - | C1H1g01597 | CX1g001516 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C2H1g15253 | 1:11,954,093-11,955,767 | - | - | - | - | - | - | Detail |
| C2H1g16729 | 1:11,956,738-11,959,165 | - | - | - | - | - | - | Detail |
| C2H1g03429 | 1:12,036,103-12,038,238 | + | C1H1g12059 | CX1g004622 | LOC_Os01g26980 | Os01g0738500 | - | Detail |
| C2H1g13415 | 1:12,067,581-12,069,632 | + | C1H1g13768 | CX1g001811 | - | Os01g0527900 | - | Detail |
| C2H1g07465 | 1:12,086,685-12,087,860 | + | C1H1g21970 | CX1g002117 | LOC_Os01g24420 | Os01g0346250 | - | Detail |
| C2H1g25406 | 1:12,110,695-12,115,118 | + | C1H1g27382 | CX1g002994 | LOC_Os01g24470 | Os01g0347000 | - | Detail |
| C2H1g02246 | 1:12,115,613-12,120,143 | - | C1H1g08071 | CX1g000129 | LOC_Os01g24480 | Os01g0347100 | - | Detail |
| C2H1g19331 | 1:12,125,101-12,126,796 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g13817 | 1:12,132,010-12,134,037 | + | C1H1g27449 | CX1g006871 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g12753 | 1:12,181,907-12,186,318 | - | C1H1g04145 | CX1g004547 | - | Os01g0852650 | - | Detail |
| C2H1g06141 | 1:12,187,581-12,188,746 | - | C1H1g09482 | CX1g001042 | LOC_Os01g24600 | Os01g0347500 | - | Detail |
| C2H1g29017 | 1:12,191,860-12,192,978 | + | C1H1g19481 | CX1g002830 | LOC_Os01g24560 | Os01g0347600 | - | Detail |
| C2H1g00502 | 1:12,208,552-12,209,729 | + | C1H1g19455 | CX1g004946 | LOC_Os01g24550 | Os01g0348000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025008 | 3:4,740,003-4,742,719 | + | C1H3g08866 | C2H3g27684 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| CX3g027908 | 3:4,743,345-4,750,659 | - | C1H3g22443 | C2H3g07444 | LOC_Os03g10469 | Os03g0201901 | - | Detail |
| CX3g028036 | 3:4,756,361-4,759,942 | - | C1H3g14443 | C2H3g09161 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| CX3g026152 | 3:4,762,351-4,765,549 | - | C1H3g22113 | C2H3g24025 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| CX3g030169 | 3:4,766,686-4,770,652 | - | C1H3g27837 | C2H3g13194 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| CX3g025689 | 3:4,772,375-4,775,132 | - | C1H3g27666 | C2H3g17561 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| CX3g029844 | 3:4,775,363-4,784,510 | + | C1H3g27625 | C2H3g21513 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| CX3g027943 | 3:4,797,476-4,798,523 | + | C1H3g03653 | C2H3g08169 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| CX3g027605 | 3:4,809,027-4,815,254 | + | C1H3g22146 | C2H3g27974 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| CX3g028482 | 3:4,817,646-4,819,123 | - | C1H3g29891 | C2H3g08201 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| CX3g026677 | 3:4,838,478-4,842,417 | + | C1H3g06442 | C2H3g30001 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| CX3g029117 | 3:4,846,363-4,847,552 | + | C1H3g30369 | C2H3g23547 | LOC_Os03g10730 | - | - | Detail |
| CX3g030767 | 3:4,866,248-4,868,287 | + | C1H3g16112 | C2H3g07827 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| CX3g025287 | 3:4,872,132-4,872,544 | - | - | C2H3g08469 | - | - | - | Detail |
| CX3g028803 | 3:4,876,103-4,881,621 | - | C1H3g13244 | C2H3g17885 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| CX3g030429 | 3:4,888,732-4,890,152 | - | C1H3g10116 | C2H3g22270 | LOC_Os03g10770 | Os03g0205300 | - | Detail |
| CX3g028760 | 3:4,898,012-4,905,844 | + | C1H3g09266 | C2H3g01278 | LOC_Os03g10780 | Os03g0205400 | - | Detail |
| CX3g029451 | 3:4,906,864-4,911,525 | + | C1H3g14529 | C2H3g28949 | LOC_Os03g10790 | Os03g0205500 | - | Detail |
| CX3g026705 | 3:4,921,739-4,924,563 | + | C1H3g24511 | C2H3g29987 | LOC_Os03g10800 | Os03g0205700 | - | Detail |
| CX3g029670 | 3:4,929,923-4,931,389 | - | C1H3g03568 | C2H3g05398 | LOC_Os03g10810 | Os03g0205800 | HHC3 | Detail |