| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g01275 | 3:4,215,112-4,223,351 | + | C1H3g18179 | CX3g027446 | LOC_Os03g09260 | Os03g0192800 | - | Detail |
| C2H3g19711 | 3:4,226,664-4,232,837 | + | C1H3g11049 | CX3g025926 | LOC_Os03g09280 | Os03g0193000 | - | Detail |
| C2H3g11800 | 3:4,233,966-4,236,254 | + | C1H3g04153 | CX3g025810 | LOC_Os03g09290 | Os03g0193075 | - | Detail |
| C2H3g07804 | 3:4,237,041-4,239,262 | + | C1H3g25160 | CX3g028060 | LOC_Os03g09300 | Os03g0191700 | - | Detail |
| C2H3g11506 | 3:4,240,806-4,245,379 | - | C1H3g05489 | CX3g027000 | LOC_Os03g09310 | Os03g0193225 | - | Detail |
| C2H3g05261 | 3:4,252,292-4,253,230 | + | C1H3g15014 | CX3g026217 | LOC_Os03g09820 | Os03g0193600 | - | Detail |
| C2H3g20661 | 3:4,254,155-4,255,363 | - | C1H3g23845 | CX3g030575 | LOC_Os03g09840 | Os03g0194100 | - | Detail |
| C2H3g25674 | 3:4,261,901-4,263,148 | - | C1H3g08748 | CX3g026299 | LOC_Os03g09850 | Os03g0194300 | - | Detail |
| C2H3g25314 | 3:4,266,561-4,268,809 | + | C1H3g08609 | CX3g025342 | LOC_Os03g09860 | Os03g0194400 | - | Detail |
| C2H3g01850 | 3:4,269,487-4,271,847 | + | C1H3g26915 | CX3g029454 | LOC_Os03g09870 | Os03g0194500 | - | Detail |
| C2H3g10528 | 3:4,273,551-4,274,138 | + | C1H3g23931 | CX3g027093 | LOC_Os03g09880 | Os03g0194600 | - | Detail |
| C2H3g10333 | 3:4,275,054-4,275,834 | - | C1H3g18007 | - | - | - | - | Detail |
| C2H3g02717 | 3:4,282,663-4,284,765 | + | C1H3g25501 | CX3g027004 | LOC_Os03g09900 | Os03g0194900 | - | Detail |
| C2H3g11804 | 3:4,295,172-4,298,459 | + | C1H3g25063 | CX3g028012 | LOC_Os03g09910 | Os03g0195100 | OsALD1 | Detail |
| C2H3g05380 | 3:4,298,977-4,302,524 | - | C1H3g19160 | CX3g030407 | LOC_Os03g09920 | Os03g0195200 | - | Detail |
| C2H3g24496 | 3:4,304,453-4,308,533 | - | C1H3g06347 | CX3g025617 | LOC_Os03g09930 | Os03g0195300 | - | Detail |
| C2H3g09781 | 3:4,327,383-4,332,902 | - | C1H3g05383 | CX3g025665 | LOC_Os03g09940 | Os03g0195450 | - | Detail |
| C2H3g05423 | 3:4,367,096-4,370,811 | + | C1H3g21097 | CX3g030854 | LOC_Os03g09970 | Os03g0195800 | - | Detail |
| C2H3g02477 | 3:4,371,320-4,371,737 | - | C1H3g03766 | - | - | - | - | Detail |
| C2H3g12869 | 3:4,375,850-4,379,747 | + | C1H3g10488 | CX3g026812 | LOC_Os03g09980 | Os03g0196000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025008 | 3:4,740,003-4,742,719 | + | C1H3g08866 | C2H3g27684 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| CX3g027908 | 3:4,743,345-4,750,659 | - | C1H3g22443 | C2H3g07444 | LOC_Os03g10469 | Os03g0201901 | - | Detail |
| CX3g028036 | 3:4,756,361-4,759,942 | - | C1H3g14443 | C2H3g09161 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| CX3g026152 | 3:4,762,351-4,765,549 | - | C1H3g22113 | C2H3g24025 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| CX3g030169 | 3:4,766,686-4,770,652 | - | C1H3g27837 | C2H3g13194 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| CX3g025689 | 3:4,772,375-4,775,132 | - | C1H3g27666 | C2H3g17561 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| CX3g029844 | 3:4,775,363-4,784,510 | + | C1H3g27625 | C2H3g21513 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| CX3g027943 | 3:4,797,476-4,798,523 | + | C1H3g03653 | C2H3g08169 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| CX3g027605 | 3:4,809,027-4,815,254 | + | C1H3g22146 | C2H3g27974 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| CX3g028482 | 3:4,817,646-4,819,123 | - | C1H3g29891 | C2H3g08201 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| CX3g026677 | 3:4,838,478-4,842,417 | + | C1H3g06442 | C2H3g30001 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| CX3g029117 | 3:4,846,363-4,847,552 | + | C1H3g30369 | C2H3g23547 | LOC_Os03g10730 | - | - | Detail |
| CX3g030767 | 3:4,866,248-4,868,287 | + | C1H3g16112 | C2H3g07827 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| CX3g025287 | 3:4,872,132-4,872,544 | - | - | C2H3g08469 | - | - | - | Detail |
| CX3g028803 | 3:4,876,103-4,881,621 | - | C1H3g13244 | C2H3g17885 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| CX3g030429 | 3:4,888,732-4,890,152 | - | C1H3g10116 | C2H3g22270 | LOC_Os03g10770 | Os03g0205300 | - | Detail |
| CX3g028760 | 3:4,898,012-4,905,844 | + | C1H3g09266 | C2H3g01278 | LOC_Os03g10780 | Os03g0205400 | - | Detail |
| CX3g029451 | 3:4,906,864-4,911,525 | + | C1H3g14529 | C2H3g28949 | LOC_Os03g10790 | Os03g0205500 | - | Detail |
| CX3g026705 | 3:4,921,739-4,924,563 | + | C1H3g24511 | C2H3g29987 | LOC_Os03g10800 | Os03g0205700 | - | Detail |
| CX3g029670 | 3:4,929,923-4,931,389 | - | C1H3g03568 | C2H3g05398 | LOC_Os03g10810 | Os03g0205800 | HHC3 | Detail |