| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g05949 | 2:31,595,085-31,596,950 | + | C1H2g11260 | CX2g019099 | LOC_Os02g56420 | Os02g0807900 | - | Detail |
| C2H2g06516 | 2:31,597,036-31,597,712 | + | - | - | - | - | - | Detail |
| C2H2g04085 | 2:31,605,843-31,608,438 | + | C1H2g25312 | CX2g019099 | LOC_Os02g56630 | Os02g0811200 | - | Detail |
| C2H2g14829 | 2:31,626,572-31,627,990 | + | C1H2g01106 | CX2g024895 | LOC_Os02g56460 | Os02g0808800 | OsCCR1 | Detail |
| C2H2g21626 | 2:31,634,207-31,635,668 | + | C1H2g24089 | CX2g022856 | LOC_Os02g56690 | Os02g0811600 | - | Detail |
| C2H2g15313 | 2:31,638,690-31,640,894 | + | C1H2g12168 | CX2g019555 | LOC_Os02g56700 | Os02g0811800 | OsCCR10 | Detail |
| C2H2g23157 | 2:31,642,351-31,643,097 | - | C1H2g01325 | CX2g021951 | LOC_Os02g46300 | Os02g0811902 | - | Detail |
| C2H2g09312 | 2:31,644,299-31,645,701 | + | C1H2g10464 | CX2g024617 | LOC_Os02g56720 | Os02g0812000 | - | Detail |
| C2H2g19326 | 2:31,650,438-31,659,116 | + | C1H2g05404 | CX2g024879 | LOC_Os02g56740 | Os02g0812400 | - | Detail |
| C2H2g02254 | 2:31,660,232-31,662,778 | + | C1H2g10963 | CX2g023091 | LOC_Os02g56750 | Os02g0812500 | - | Detail |
| C2H2g09710 | 2:31,664,336-31,667,671 | + | C1H2g03230 | CX2g023091 | LOC_Os02g56760 | Os02g0812600 | - | Detail |
| C2H2g19171 | 2:31,668,467-31,670,426 | + | C1H2g07056 | CX2g023091 | LOC_Os02g56800 | Os02g0812700 | - | Detail |
| C2H2g28532 | 2:31,673,459-31,675,311 | + | C1H2g00231 | CX2g023091 | LOC_Os02g56810 | Os02g0813083 | - | Detail |
| C2H2g15955 | 2:31,676,911-31,680,051 | + | C1H2g30055 | CX2g023091 | LOC_Os02g56820 | Os02g0813083 | - | Detail |
| C2H2g28568 | 2:31,680,338-31,681,417 | + | C1H2g14316 | CX2g023249 | LOC_Os02g56820 | Os02g0813166 | - | Detail |
| C2H2g25608 | 2:31,683,649-31,685,821 | + | C1H2g01150 | CX2g023091 | LOC_Os02g56840 | Os02g0813350 | - | Detail |
| C2H2g15090 | 2:31,687,593-31,698,218 | + | C1H2g13338 | CX2g022536 | LOC_Os02g56850 | Os02g0813500 | - | Detail |
| C2H2g10206 | 2:31,709,532-31,710,929 | + | C1H2g08007 | CX2g020189 | LOC_Os02g56860 | Os02g0813600 | - | Detail |
| C2H2g05971 | 2:31,715,048-31,723,808 | - | C1H2g08319 | CX2g019469 | LOC_Os02g56880 | Os02g0813800 | - | Detail |
| C2H2g25448 | 2:31,729,243-31,730,124 | - | C1H2g07591 | CX2g020760 | LOC_Os02g56900 | Os02g0814000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025008 | 3:4,740,003-4,742,719 | + | C1H3g08866 | C2H3g27684 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| CX3g027908 | 3:4,743,345-4,750,659 | - | C1H3g22443 | C2H3g07444 | LOC_Os03g10469 | Os03g0201901 | - | Detail |
| CX3g028036 | 3:4,756,361-4,759,942 | - | C1H3g14443 | C2H3g09161 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| CX3g026152 | 3:4,762,351-4,765,549 | - | C1H3g22113 | C2H3g24025 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| CX3g030169 | 3:4,766,686-4,770,652 | - | C1H3g27837 | C2H3g13194 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| CX3g025689 | 3:4,772,375-4,775,132 | - | C1H3g27666 | C2H3g17561 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| CX3g029844 | 3:4,775,363-4,784,510 | + | C1H3g27625 | C2H3g21513 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| CX3g027943 | 3:4,797,476-4,798,523 | + | C1H3g03653 | C2H3g08169 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| CX3g027605 | 3:4,809,027-4,815,254 | + | C1H3g22146 | C2H3g27974 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| CX3g028482 | 3:4,817,646-4,819,123 | - | C1H3g29891 | C2H3g08201 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| CX3g026677 | 3:4,838,478-4,842,417 | + | C1H3g06442 | C2H3g30001 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| CX3g029117 | 3:4,846,363-4,847,552 | + | C1H3g30369 | C2H3g23547 | LOC_Os03g10730 | - | - | Detail |
| CX3g030767 | 3:4,866,248-4,868,287 | + | C1H3g16112 | C2H3g07827 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| CX3g025287 | 3:4,872,132-4,872,544 | - | - | C2H3g08469 | - | - | - | Detail |
| CX3g028803 | 3:4,876,103-4,881,621 | - | C1H3g13244 | C2H3g17885 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| CX3g030429 | 3:4,888,732-4,890,152 | - | C1H3g10116 | C2H3g22270 | LOC_Os03g10770 | Os03g0205300 | - | Detail |
| CX3g028760 | 3:4,898,012-4,905,844 | + | C1H3g09266 | C2H3g01278 | LOC_Os03g10780 | Os03g0205400 | - | Detail |
| CX3g029451 | 3:4,906,864-4,911,525 | + | C1H3g14529 | C2H3g28949 | LOC_Os03g10790 | Os03g0205500 | - | Detail |
| CX3g026705 | 3:4,921,739-4,924,563 | + | C1H3g24511 | C2H3g29987 | LOC_Os03g10800 | Os03g0205700 | - | Detail |
| CX3g029670 | 3:4,929,923-4,931,389 | - | C1H3g03568 | C2H3g05398 | LOC_Os03g10810 | Os03g0205800 | HHC3 | Detail |