| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g05628 | 2:17,775,974-17,780,212 | + | C1H2g06236 | CX2g018935 | LOC_Os02g31070 | Os02g0515000 | - | Detail |
| C2H2g00412 | 2:17,786,987-17,792,901 | - | C1H2g28827 | CX2g023990 | LOC_Os02g31080 | Os02g0515200 | - | Detail |
| C2H2g20276 | 2:17,822,927-17,824,362 | - | C1H2g18050 | CX2g023720 | LOC_Os02g31100 | Os02g0515600 | - | Detail |
| C2H2g22827 | 2:17,826,171-17,826,428 | - | C1H2g17841 | CX2g023720 | LOC_Os02g31100 | Os02g0515600 | - | Detail |
| C2H2g22713 | 2:17,869,651-17,872,331 | - | C1H2g14621 | CX2g018953 | LOC_Os02g31140 | Os02g0516400 | CFL1 | Detail |
| C2H2g27355 | 2:17,879,442-17,885,428 | - | C1H2g25008 | CX2g022223 | LOC_Os02g31150 | Os02g0516600 | - | Detail |
| C2H2g15619 | 2:17,891,293-17,895,134 | - | C1H2g07996 | CX2g021699 | LOC_Os02g31160 | Os02g0516800 | - | Detail |
| C2H2g23348 | 2:17,907,907-17,908,188 | - | C1H2g06091 | CX2g023379 | - | - | - | Detail |
| C2H2g28412 | 2:17,908,716-17,909,305 | - | C1H2g31667 | - | - | - | - | Detail |
| C2H2g07464 | 2:17,923,776-17,930,527 | + | C1H2g24792 | CX2g019490 | LOC_Os02g31220 | Os02g0517300 | - | Detail |
| C2H2g15001 | 2:17,972,943-17,981,236 | + | C1H2g15770 | CX2g023271 | LOC_Os02g31290 | Os02g0517531 | - | Detail |
| C2H2g13964 | 2:17,989,724-17,994,038 | - | C1H2g21755 | CX2g023733 | LOC_Os02g32280 | Os02g0522700 | - | Detail |
| C2H2g30310 | 2:18,003,752-18,004,506 | - | C1H2g11106 | CX2g024433 | LOC_Os02g32200 | Os02g0521700 | - | Detail |
| C2H2g10717 | 2:18,005,797-18,009,367 | - | C1H2g08992 | CX2g023733 | LOC_Os02g32190 | Os02g0521600 | - | Detail |
| C2H2g04683 | 2:18,013,962-18,018,146 | - | C1H2g18001 | CX2g022455 | LOC_Os02g32180 | Os02g0521500 | - | Detail |
| C2H2g12935 | 2:18,020,343-18,027,132 | + | C1H2g31338 | CX2g023072 | LOC_Os02g32160 | Os02g0521300 | OsBON1 | Detail |
| C2H2g24508 | 2:18,035,329-18,036,705 | + | C1H2g24096 | CX2g018917 | LOC_Os02g32140 | Os02g0521100 | - | Detail |
| C2H2g06534 | 2:18,039,593-18,043,788 | + | C1H2g18885 | CX2g024178 | LOC_Os02g32120 | Os02g0520800 | - | Detail |
| C2H2g08579 | 2:18,048,656-18,051,931 | + | C1H2g21080 | CX2g024646 | LOC_Os02g32110 | Os02g0520750 | - | Detail |
| C2H2g05235 | 2:18,071,580-18,073,862 | + | C1H2g10881 | CX2g023239 | LOC_Os02g32060 | Os02g0520100 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025008 | 3:4,740,003-4,742,719 | + | C1H3g08866 | C2H3g27684 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| CX3g027908 | 3:4,743,345-4,750,659 | - | C1H3g22443 | C2H3g07444 | LOC_Os03g10469 | Os03g0201901 | - | Detail |
| CX3g028036 | 3:4,756,361-4,759,942 | - | C1H3g14443 | C2H3g09161 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| CX3g026152 | 3:4,762,351-4,765,549 | - | C1H3g22113 | C2H3g24025 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| CX3g030169 | 3:4,766,686-4,770,652 | - | C1H3g27837 | C2H3g13194 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| CX3g025689 | 3:4,772,375-4,775,132 | - | C1H3g27666 | C2H3g17561 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| CX3g029844 | 3:4,775,363-4,784,510 | + | C1H3g27625 | C2H3g21513 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| CX3g027943 | 3:4,797,476-4,798,523 | + | C1H3g03653 | C2H3g08169 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| CX3g027605 | 3:4,809,027-4,815,254 | + | C1H3g22146 | C2H3g27974 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| CX3g028482 | 3:4,817,646-4,819,123 | - | C1H3g29891 | C2H3g08201 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| CX3g026677 | 3:4,838,478-4,842,417 | + | C1H3g06442 | C2H3g30001 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| CX3g029117 | 3:4,846,363-4,847,552 | + | C1H3g30369 | C2H3g23547 | LOC_Os03g10730 | - | - | Detail |
| CX3g030767 | 3:4,866,248-4,868,287 | + | C1H3g16112 | C2H3g07827 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| CX3g025287 | 3:4,872,132-4,872,544 | - | - | C2H3g08469 | - | - | - | Detail |
| CX3g028803 | 3:4,876,103-4,881,621 | - | C1H3g13244 | C2H3g17885 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| CX3g030429 | 3:4,888,732-4,890,152 | - | C1H3g10116 | C2H3g22270 | LOC_Os03g10770 | Os03g0205300 | - | Detail |
| CX3g028760 | 3:4,898,012-4,905,844 | + | C1H3g09266 | C2H3g01278 | LOC_Os03g10780 | Os03g0205400 | - | Detail |
| CX3g029451 | 3:4,906,864-4,911,525 | + | C1H3g14529 | C2H3g28949 | LOC_Os03g10790 | Os03g0205500 | - | Detail |
| CX3g026705 | 3:4,921,739-4,924,563 | + | C1H3g24511 | C2H3g29987 | LOC_Os03g10800 | Os03g0205700 | - | Detail |
| CX3g029670 | 3:4,929,923-4,931,389 | - | C1H3g03568 | C2H3g05398 | LOC_Os03g10810 | Os03g0205800 | HHC3 | Detail |