| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g05526 | 5:23,736,338-23,739,465 | + | C1H5g00985 | CX5g038165 | LOC_Os05g49300 | Os05g0568100 | - | Detail |
| C2H5g04009 | 5:23,742,336-23,743,886 | + | C1H5g09631 | CX5g036842 | LOC_Os05g49310 | Os05g0568200 | Os2R_MYB61 | Detail |
| C2H5g09227 | 5:23,745,288-23,745,821 | - | C1H5g25001 | CX5g039631 | LOC_Os05g49320 | Os05g0568300 | - | Detail |
| C2H5g10434 | 5:23,752,496-23,753,203 | + | C1H5g09281 | CX5g038436 | LOC_Os05g49350 | Os05g0568600 | - | Detail |
| C2H5g00779 | 5:23,755,879-23,756,652 | + | C1H5g06213 | CX5g038804 | LOC_Os05g49370 | Os05g0568800 | - | Detail |
| C2H5g19384 | 5:23,760,248-23,763,791 | - | C1H5g26494 | CX5g039987 | LOC_Os05g49380 | Os05g0568900 | - | Detail |
| C2H5g03690 | 5:23,765,575-23,766,966 | + | C1H5g12766 | CX5g039827 | LOC_Os05g49400 | Os05g0569100 | - | Detail |
| C2H5g19196 | 5:23,771,324-23,772,274 | + | C1H5g17667 | CX5g037902 | LOC_Os05g49410 | Os05g0569200 | - | Detail |
| C2H5g28987 | 5:23,775,543-23,780,979 | + | C1H5g15556 | CX5g036828 | LOC_Os05g49420 | Os05g0569300 | - | Detail |
| C2H5g03335 | 5:23,784,420-23,786,547 | + | C1H5g04196 | CX5g040312 | LOC_Os05g49430 | Os05g0569400 | - | Detail |
| C2H5g15224 | 5:23,787,138-23,787,946 | + | C1H5g30048 | CX5g037007 | LOC_Os05g49440 | Os05g0569500 | - | Detail |
| C2H5g09955 | 5:23,793,412-23,794,379 | + | C1H11g02939 | CX5g037778 | LOC_Os12g36430 | - | - | Detail |
| C2H5g07371 | 5:23,802,332-23,807,245 | - | C1H5g08515 | CX5g040294 | LOC_Os05g49460 | Os05g0569700 | - | Detail |
| C2H5g10887 | 5:23,807,760-23,808,824 | - | C1H8g13722 | CX5g037998 | LOC_Os05g49470 | Os05g0569800 | - | Detail |
| C2H5g01826 | 5:23,810,640-23,821,049 | + | C1H5g11632 | CX5g037511 | LOC_Os05g49480 | Os05g0569900 | - | Detail |
| C2H5g21108 | 5:23,828,210-23,829,475 | + | C1H5g05131 | CX5g039576 | LOC_Os05g49490 | Os05g0570200 | - | Detail |
| C2H5g18929 | 5:23,843,647-23,844,858 | - | C1H5g05622 | CX5g039268 | LOC_Os05g49510 | Os05g0570350 | - | Detail |
| C2H5g20762 | 5:23,846,561-23,852,313 | + | C1H5g08515 | CX5g038483 | LOC_Os05g49520 | Os05g0570400 | - | Detail |
| C2H5g25686 | 5:23,854,333-23,855,520 | + | C1H5g12265 | CX5g039566 | LOC_Os05g49530 | Os05g0320100 | - | Detail |
| C2H5g07154 | 5:23,867,356-23,867,984 | - | C1H5g24631 | CX5g038604 | LOC_Os05g49580 | Os05g0570900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025008 | 3:4,740,003-4,742,719 | + | C1H3g08866 | C2H3g27684 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| CX3g027908 | 3:4,743,345-4,750,659 | - | C1H3g22443 | C2H3g07444 | LOC_Os03g10469 | Os03g0201901 | - | Detail |
| CX3g028036 | 3:4,756,361-4,759,942 | - | C1H3g14443 | C2H3g09161 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| CX3g026152 | 3:4,762,351-4,765,549 | - | C1H3g22113 | C2H3g24025 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| CX3g030169 | 3:4,766,686-4,770,652 | - | C1H3g27837 | C2H3g13194 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| CX3g025689 | 3:4,772,375-4,775,132 | - | C1H3g27666 | C2H3g17561 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| CX3g029844 | 3:4,775,363-4,784,510 | + | C1H3g27625 | C2H3g21513 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| CX3g027943 | 3:4,797,476-4,798,523 | + | C1H3g03653 | C2H3g08169 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| CX3g027605 | 3:4,809,027-4,815,254 | + | C1H3g22146 | C2H3g27974 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| CX3g028482 | 3:4,817,646-4,819,123 | - | C1H3g29891 | C2H3g08201 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| CX3g026677 | 3:4,838,478-4,842,417 | + | C1H3g06442 | C2H3g30001 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| CX3g029117 | 3:4,846,363-4,847,552 | + | C1H3g30369 | C2H3g23547 | LOC_Os03g10730 | - | - | Detail |
| CX3g030767 | 3:4,866,248-4,868,287 | + | C1H3g16112 | C2H3g07827 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| CX3g025287 | 3:4,872,132-4,872,544 | - | - | C2H3g08469 | - | - | - | Detail |
| CX3g028803 | 3:4,876,103-4,881,621 | - | C1H3g13244 | C2H3g17885 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| CX3g030429 | 3:4,888,732-4,890,152 | - | C1H3g10116 | C2H3g22270 | LOC_Os03g10770 | Os03g0205300 | - | Detail |
| CX3g028760 | 3:4,898,012-4,905,844 | + | C1H3g09266 | C2H3g01278 | LOC_Os03g10780 | Os03g0205400 | - | Detail |
| CX3g029451 | 3:4,906,864-4,911,525 | + | C1H3g14529 | C2H3g28949 | LOC_Os03g10790 | Os03g0205500 | - | Detail |
| CX3g026705 | 3:4,921,739-4,924,563 | + | C1H3g24511 | C2H3g29987 | LOC_Os03g10800 | Os03g0205700 | - | Detail |
| CX3g029670 | 3:4,929,923-4,931,389 | - | C1H3g03568 | C2H3g05398 | LOC_Os03g10810 | Os03g0205800 | HHC3 | Detail |