| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H7g28957 | 7:2,647,987-2,652,222 | + | C2H7g18578 | CX7g049267 | LOC_Os07g06440 | Os07g0158200 | - | Detail |
| C1H7g02643 | 7:2,651,703-2,653,336 | - | C2H7g19887 | CX7g050246 | LOC_Os07g06450 | Os07g0158300 | - | Detail |
| C1H7g15593 | 7:2,656,690-2,659,367 | - | C2H7g15754 | CX7g049108 | LOC_Os07g06470 | Os07g0158500 | OsNF-YA5, HAP2J | Detail |
| C1H7g02820 | 7:2,677,083-2,679,280 | - | C2H7g01924 | CX7g046696 | LOC_Os07g06490 | Os07g0158800 | - | Detail |
| C1H7g07397 | 7:2,681,957-2,684,901 | - | C2H7g18089 | CX7g050343 | LOC_Os07g06500 | Os07g0158900 | - | Detail |
| C1H7g13625 | 7:2,691,817-2,695,579 | - | C2H7g14307 | CX7g048728 | LOC_Os07g06550 | Os07g0159500 | - | Detail |
| C1H7g22938 | 7:2,698,405-2,700,640 | - | C2H7g04198 | CX7g046097 | LOC_Os07g06570 | Os07g0159700 | - | Detail |
| C1H7g17805 | 7:2,707,744-2,711,018 | + | C2H7g29566 | CX7g049953 | LOC_Os07g06590 | Os07g0159800 | - | Detail |
| C1H7g06689 | 7:2,714,213-2,714,669 | - | - | - | - | - | - | Detail |
| C1H7g21339 | 7:2,716,199-2,723,218 | + | C2H7g00845 | CX7g050126 | LOC_Os07g06610 | Os07g0160000 | - | Detail |
| C1H7g04752 | 7:2,731,150-2,738,207 | + | C2H7g20693 | CX7g047043 | LOC_Os07g06620 | Os07g0160100 | - | Detail |
| C1H7g02883 | 7:2,751,346-2,753,973 | + | C2H7g17130 | CX7g048609 | - | - | - | Detail |
| C1H7g31839 | 7:2,754,484-2,756,689 | - | C2H7g15323 | CX7g050004 | LOC_Os07g06660 | Os07g0160400 | - | Detail |
| C1H7g10977 | 7:2,761,109-2,764,097 | + | C2H7g04792 | CX7g049818 | LOC_Os07g06670 | Os07g0158900 | - | Detail |
| C1H7g30967 | 7:2,767,302-2,770,708 | + | C2H7g20200 | CX7g046783 | LOC_Os07g06680 | Os07g0160600 | - | Detail |
| C1H7g30885 | 7:2,786,046-2,791,677 | - | C2H7g10241 | CX7g047372 | LOC_Os07g06710 | Os07g0161000 | - | Detail |
| C1H7g26727 | 7:2,793,829-2,795,835 | + | C2H7g20288 | CX7g046953 | LOC_Os07g06730 | Os07g0161500 | - | Detail |
| C1H7g06448 | 7:2,796,906-2,801,711 | - | C2H7g04340 | CX7g049860 | LOC_Os07g06740 | Os07g0161600 | CDPK17, OsCPK17 | Detail |
| C1H7g15459 | 7:2,819,892-2,821,644 | - | C2H7g11082 | CX7g048571 | LOC_Os07g06800 | Os07g0162100 | - | Detail |
| C1H7g24248 | 7:2,825,852-2,830,850 | + | C2H7g01313 | CX7g049055 | LOC_Os07g06820 | Os07g0162300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025008 | 3:4,740,003-4,742,719 | + | C1H3g08866 | C2H3g27684 | LOC_Os03g10460 | Os03g0201700 | - | Detail |
| CX3g027908 | 3:4,743,345-4,750,659 | - | C1H3g22443 | C2H3g07444 | LOC_Os03g10469 | Os03g0201901 | - | Detail |
| CX3g028036 | 3:4,756,361-4,759,942 | - | C1H3g14443 | C2H3g09161 | LOC_Os03g10500 | Os03g0202001 | - | Detail |
| CX3g026152 | 3:4,762,351-4,765,549 | - | C1H3g22113 | C2H3g24025 | LOC_Os03g10510 | Os03g0202200 | OsVDAC5 | Detail |
| CX3g030169 | 3:4,766,686-4,770,652 | - | C1H3g27837 | C2H3g13194 | LOC_Os03g10520 | Os03g0202300 | - | Detail |
| CX3g025689 | 3:4,772,375-4,775,132 | - | C1H3g27666 | C2H3g17561 | LOC_Os03g10590 | Os03g0203000 | - | Detail |
| CX3g029844 | 3:4,775,363-4,784,510 | + | C1H3g27625 | C2H3g21513 | LOC_Os03g10600 | Os03g0203100 | - | Detail |
| CX3g027943 | 3:4,797,476-4,798,523 | + | C1H3g03653 | C2H3g08169 | LOC_Os03g10620 | Os03g0203200 | D14, D88, D88/D14, qPPB3, HTD4 | Detail |
| CX3g027605 | 3:4,809,027-4,815,254 | + | C1H3g22146 | C2H3g27974 | LOC_Os03g10640 | Os03g0203700 | - | Detail |
| CX3g028482 | 3:4,817,646-4,819,123 | - | C1H3g29891 | C2H3g08201 | LOC_Os03g10650 | Os03g0203800 | - | Detail |
| CX3g026677 | 3:4,838,478-4,842,417 | + | C1H3g06442 | C2H3g30001 | LOC_Os03g10680 | Os03g0204100 | - | Detail |
| CX3g029117 | 3:4,846,363-4,847,552 | + | C1H3g30369 | C2H3g23547 | LOC_Os03g10730 | - | - | Detail |
| CX3g030767 | 3:4,866,248-4,868,287 | + | C1H3g16112 | C2H3g07827 | LOC_Os03g10730 | Os03g0157000 | - | Detail |
| CX3g025287 | 3:4,872,132-4,872,544 | - | - | C2H3g08469 | - | - | - | Detail |
| CX3g028803 | 3:4,876,103-4,881,621 | - | C1H3g13244 | C2H3g17885 | LOC_Os03g10750 | Os03g0205000 | SPL35 | Detail |
| CX3g030429 | 3:4,888,732-4,890,152 | - | C1H3g10116 | C2H3g22270 | LOC_Os03g10770 | Os03g0205300 | - | Detail |
| CX3g028760 | 3:4,898,012-4,905,844 | + | C1H3g09266 | C2H3g01278 | LOC_Os03g10780 | Os03g0205400 | - | Detail |
| CX3g029451 | 3:4,906,864-4,911,525 | + | C1H3g14529 | C2H3g28949 | LOC_Os03g10790 | Os03g0205500 | - | Detail |
| CX3g026705 | 3:4,921,739-4,924,563 | + | C1H3g24511 | C2H3g29987 | LOC_Os03g10800 | Os03g0205700 | - | Detail |
| CX3g029670 | 3:4,929,923-4,931,389 | - | C1H3g03568 | C2H3g05398 | LOC_Os03g10810 | Os03g0205800 | HHC3 | Detail |