| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g06608 | 2:3,309,815-3,313,499 | + | C1H2g13885 | CX6g043108 | LOC_Os02g07330 | Os02g0169700 | - | Detail |
| C2H2g01264 | 2:3,315,872-3,329,329 | + | C1H2g04805 | CX2g022837 | LOC_Os02g07340 | Os02g0169800 | - | Detail |
| C2H2g22477 | 2:3,330,287-3,334,151 | - | C1H2g14236 | CX2g022025 | LOC_Os02g07350 | Os02g0169900 | - | Detail |
| C2H2g09938 | 2:3,335,142-3,340,838 | + | C1H2g12408 | CX2g019659 | LOC_Os02g07360 | Os02g0170000 | - | Detail |
| C2H2g21866 | 2:3,341,018-3,342,802 | + | C1H2g30375 | CX6g043108 | LOC_Os02g07410 | Os02g0170100 | - | Detail |
| C2H2g02927 | 2:3,343,921-3,345,465 | - | C1H2g28383 | - | LOC_Os02g07420 | Os02g0170200 | - | Detail |
| C2H2g25691 | 2:3,347,747-3,350,614 | - | C1H2g03281 | CX2g020746 | LOC_Os02g07430 | Os02g0170300 | MADS29, OsMADS29 | Detail |
| C2H2g02842 | 2:3,361,212-3,362,192 | - | C1H2g26637 | CX2g023087 | LOC_Os02g07450 | Os02g0170500 | OsNF-YC1, HAP5A | Detail |
| C2H2g11142 | 2:3,364,179-3,364,945 | - | - | - | - | - | - | Detail |
| C2H2g15301 | 2:3,371,304-3,371,918 | - | C1H2g15503 | CX2g024402 | LOC_Os02g07480 | - | - | Detail |
| C2H2g20496 | 2:3,372,059-3,375,763 | - | C1H2g15503 | CX2g024402 | LOC_Os02g07480 | - | - | Detail |
| C2H2g09698 | 2:3,381,040-3,385,823 | + | C1H2g28251 | CX2g020723 | LOC_Os02g07490 | Os02g0171100 | - | Detail |
| C2H2g27151 | 2:3,390,208-3,390,851 | + | C1H2g07223 | CX2g022156 | - | - | - | Detail |
| C2H2g21009 | 2:3,393,972-3,394,372 | + | C1H2g30886 | CX2g022835 | LOC_Os02g07575 | Os02g0171700 | - | Detail |
| C2H2g00088 | 2:3,396,292-3,396,955 | + | C1H2g23570 | - | LOC_Os02g07624 | Os02g0172000 | - | Detail |
| C2H2g22052 | 2:3,398,641-3,399,256 | + | C1H2g13880 | - | LOC_Os02g07600 | Os02g0172000 | - | Detail |
| C2H2g01379 | 2:3,401,692-3,402,192 | + | C1H2g07401 | CX2g018955 | LOC_Os02g07624 | Os02g0172300 | - | Detail |
| C2H2g02678 | 2:3,404,211-3,411,577 | - | C1H2g19030 | CX2g023844 | LOC_Os02g07630 | Os02g0172600 | OsHMA6 | Detail |
| C2H2g18811 | 2:3,415,215-3,416,545 | + | C1H2g14064 | CX2g020417 | - | Os02g0646200 | - | Detail |
| C2H2g24641 | 2:3,422,700-3,425,660 | + | C1H2g07152 | CX2g022301 | LOC_Os02g07650 | Os02g0172800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030929 | 3:4,605,437-4,606,410 | - | C1H3g04729 | C2H3g24222 | LOC_Os03g10210 | Os03g0198600 | HOX12, Oshox12, OsHox12, GT1 | Detail |
| CX3g028200 | 3:4,609,071-4,609,220 | + | - | - | - | - | - | Detail |
| CX3g026871 | 3:4,613,994-4,614,455 | + | - | - | LOC_Os09g39130 | Os09g0564800 | - | Detail |
| CX3g026889 | 3:4,627,875-4,629,870 | - | C1H3g23090 | C2H3g16295 | LOC_Os03g10220 | - | - | Detail |
| CX3g026154 | 3:4,630,812-4,633,715 | - | C1H3g13438 | C2H3g19804 | LOC_Os03g10224 | Os03g0198900 | - | Detail |
| CX3g028745 | 3:4,633,901-4,638,275 | + | C1H3g16749 | C2H3g09522 | LOC_Os03g10230 | Os03g0199000 | - | Detail |
| CX3g029096 | 3:4,643,197-4,644,372 | + | C1H3g12272 | C2H3g01585 | LOC_Os03g10240 | Os03g0199100 | - | Detail |
| CX3g031305 | 3:4,654,085-4,655,018 | - | C1H3g00274 | C2H3g23420 | LOC_Os03g10260 | Os03g0199500 | - | Detail |
| CX3g025392 | 3:4,671,843-4,673,085 | + | C1H3g07008 | C2H3g26891 | LOC_Os03g10300 | Os03g0200000 | - | Detail |
| CX3g029912 | 3:4,680,964-4,682,725 | + | C1H3g12286 | C2H3g01636 | LOC_Os03g10320 | Os03g0200200 | - | Detail |
| CX3g028962 | 3:4,688,899-4,689,504 | + | C1H3g29696 | C2H3g23926 | - | - | - | Detail |
| CX3g025427 | 3:4,690,738-4,692,702 | + | C1H3g13020 | C2H3g07176 | LOC_Os03g10340 | Os03g0200500 | - | Detail |
| CX3g027963 | 3:4,693,450-4,696,543 | - | C1H3g29298 | C2H3g17766 | LOC_Os03g10350 | Os03g0200600 | OsTPR075 | Detail |
| CX3g025362 | 3:4,701,236-4,703,268 | - | C1H3g01933 | C2H3g08890 | LOC_Os03g10360 | Os03g0200700 | - | Detail |
| CX3g031231 | 3:4,704,440-4,706,740 | - | C1H3g30301 | C2H3g09465 | LOC_Os03g10370 | Os03g0200800 | - | Detail |
| CX3g028366 | 3:4,710,479-4,712,645 | + | C1H3g28372 | C2H3g19650 | LOC_Os03g10390 | Os03g0201000 | - | Detail |
| CX3g026809 | 3:4,713,968-4,717,290 | - | C1H3g07769 | C2H3g21201 | LOC_Os03g10400 | Os03g0201100 | - | Detail |
| CX3g027641 | 3:4,720,018-4,722,399 | + | C1H3g26783 | C2H3g27980 | LOC_Os03g10420 | Os03g0201400 | - | Detail |
| CX3g026129 | 3:4,734,155-4,735,969 | + | C1H3g14289 | C2H3g05108 | LOC_Os03g10440 | Os03g0201500 | OsMORE1a | Detail |
| CX3g029780 | 3:4,736,952-4,739,174 | - | C1H3g07517 | C2H3g04674 | LOC_Os03g10450 | Os03g0201600 | - | Detail |