| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H10g25921 | 10:13,731,223-13,732,406 | + | C1H10g23915 | - | LOC_Os10g29050 | Os10g0425900 | - | Detail |
| C2H10g00091 | 10:13,735,299-13,736,589 | - | - | - | - | - | - | Detail |
| C2H10g19607 | 10:13,757,700-13,758,812 | - | C1H10g03835 | - | LOC_Os10g29100 | Os10g0427300 | - | Detail |
| C2H10g19948 | 10:13,759,848-13,761,017 | - | C1H10g25013 | CX10g009188 | LOC_Os10g29110 | Os10g0427300 | - | Detail |
| C2H10g05132 | 10:13,787,730-13,788,839 | + | C1H10g04198 | CX10g009188 | LOC_Os10g29180 | Os10g0427300 | - | Detail |
| C2H10g29852 | 10:13,794,151-13,795,218 | + | C1H10g18266 | CX10g009188 | LOC_Os10g29220 | Os10g0427300 | - | Detail |
| C2H10g25082 | 10:13,799,047-13,799,855 | + | C1H10g22437 | CX10g010073 | LOC_Os10g29230 | Os10g0427300 | - | Detail |
| C2H10g09699 | 10:13,804,934-13,806,022 | + | C1H10g08936 | CX10g009188 | LOC_Os10g29260 | Os10g0427300 | - | Detail |
| C2H10g01354 | 10:13,821,975-13,823,063 | + | C1H10g03835 | CX10g009188 | LOC_Os10g29310 | Os10g0427300 | - | Detail |
| C2H10g22710 | 10:13,826,036-13,826,320 | - | - | - | - | - | - | Detail |
| C2H10g05321 | 10:13,826,423-13,826,776 | + | C1H10g08339 | - | - | - | - | Detail |
| C2H10g27715 | 10:13,833,116-13,835,842 | - | C1H10g01264 | - | - | - | - | Detail |
| C2H10g00269 | 10:13,845,858-13,847,364 | + | C1H10g25018 | CX10g009188 | LOC_Os10g29330 | Os10g0428900 | - | Detail |
| C2H10g27963 | 10:13,855,883-13,856,498 | + | - | - | - | Os10g0428900 | - | Detail |
| C2H10g18031 | 10:13,866,800-13,868,008 | - | C1H10g22437 | CX10g009188 | LOC_Os10g29370 | Os10g0429200 | - | Detail |
| C2H10g09654 | 10:13,868,768-13,869,883 | + | C1H10g11944 | CX10g009188 | LOC_Os10g29380 | Os10g0429300 | - | Detail |
| C2H10g27138 | 10:13,871,955-13,873,043 | + | C1H10g03443 | CX10g009188 | LOC_Os10g29360 | Os10g0427300 | - | Detail |
| C2H10g30588 | 10:13,876,684-13,877,775 | + | C1H10g25013 | CX10g009188 | LOC_Os10g29360 | Os10g0427300 | - | Detail |
| C2H10g15753 | 10:13,884,877-13,887,962 | + | C1H10g22437 | CX10g010155 | LOC_Os10g29410 | Os10g0429651 | - | Detail |
| C2H10g03111 | 10:13,890,078-13,890,287 | + | C1H10g18696 | CX10g010224 | LOC_Os10g29410 | Os10g0429600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030929 | 3:4,605,437-4,606,410 | - | C1H3g04729 | C2H3g24222 | LOC_Os03g10210 | Os03g0198600 | HOX12, Oshox12, OsHox12, GT1 | Detail |
| CX3g028200 | 3:4,609,071-4,609,220 | + | - | - | - | - | - | Detail |
| CX3g026871 | 3:4,613,994-4,614,455 | + | - | - | LOC_Os09g39130 | Os09g0564800 | - | Detail |
| CX3g026889 | 3:4,627,875-4,629,870 | - | C1H3g23090 | C2H3g16295 | LOC_Os03g10220 | - | - | Detail |
| CX3g026154 | 3:4,630,812-4,633,715 | - | C1H3g13438 | C2H3g19804 | LOC_Os03g10224 | Os03g0198900 | - | Detail |
| CX3g028745 | 3:4,633,901-4,638,275 | + | C1H3g16749 | C2H3g09522 | LOC_Os03g10230 | Os03g0199000 | - | Detail |
| CX3g029096 | 3:4,643,197-4,644,372 | + | C1H3g12272 | C2H3g01585 | LOC_Os03g10240 | Os03g0199100 | - | Detail |
| CX3g031305 | 3:4,654,085-4,655,018 | - | C1H3g00274 | C2H3g23420 | LOC_Os03g10260 | Os03g0199500 | - | Detail |
| CX3g025392 | 3:4,671,843-4,673,085 | + | C1H3g07008 | C2H3g26891 | LOC_Os03g10300 | Os03g0200000 | - | Detail |
| CX3g029912 | 3:4,680,964-4,682,725 | + | C1H3g12286 | C2H3g01636 | LOC_Os03g10320 | Os03g0200200 | - | Detail |
| CX3g028962 | 3:4,688,899-4,689,504 | + | C1H3g29696 | C2H3g23926 | - | - | - | Detail |
| CX3g025427 | 3:4,690,738-4,692,702 | + | C1H3g13020 | C2H3g07176 | LOC_Os03g10340 | Os03g0200500 | - | Detail |
| CX3g027963 | 3:4,693,450-4,696,543 | - | C1H3g29298 | C2H3g17766 | LOC_Os03g10350 | Os03g0200600 | OsTPR075 | Detail |
| CX3g025362 | 3:4,701,236-4,703,268 | - | C1H3g01933 | C2H3g08890 | LOC_Os03g10360 | Os03g0200700 | - | Detail |
| CX3g031231 | 3:4,704,440-4,706,740 | - | C1H3g30301 | C2H3g09465 | LOC_Os03g10370 | Os03g0200800 | - | Detail |
| CX3g028366 | 3:4,710,479-4,712,645 | + | C1H3g28372 | C2H3g19650 | LOC_Os03g10390 | Os03g0201000 | - | Detail |
| CX3g026809 | 3:4,713,968-4,717,290 | - | C1H3g07769 | C2H3g21201 | LOC_Os03g10400 | Os03g0201100 | - | Detail |
| CX3g027641 | 3:4,720,018-4,722,399 | + | C1H3g26783 | C2H3g27980 | LOC_Os03g10420 | Os03g0201400 | - | Detail |
| CX3g026129 | 3:4,734,155-4,735,969 | + | C1H3g14289 | C2H3g05108 | LOC_Os03g10440 | Os03g0201500 | OsMORE1a | Detail |
| CX3g029780 | 3:4,736,952-4,739,174 | - | C1H3g07517 | C2H3g04674 | LOC_Os03g10450 | Os03g0201600 | - | Detail |