| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g22314 | 2:10,262,566-10,265,109 | + | C2H2g04043 | CX2g020939 | LOC_Os02g19170 | Os02g0293800 | - | Detail |
| C1H2g19051 | 2:10,266,002-10,266,799 | - | C2H2g22356 | CX2g023300 | LOC_Os02g19180 | Os02g0293900 | - | Detail |
| C1H2g14610 | 2:10,269,471-10,272,958 | - | C2H2g04664 | - | - | - | - | Detail |
| C1H2g30462 | 2:10,276,381-10,277,427 | + | C2H2g10793 | CX2g021743 | LOC_Os02g19380 | Os02g0294000 | - | Detail |
| C1H2g16318 | 2:10,282,119-10,283,387 | - | - | CX2g022754 | LOC_Os02g19200 | Os02g0294100 | - | Detail |
| C1H2g06538 | 2:10,288,484-10,294,765 | + | C2H2g23302 | CX2g024663 | LOC_Os02g19210 | Os02g0294600 | - | Detail |
| C1H2g04325 | 2:10,298,052-10,306,915 | - | C2H2g17946 | CX2g023610 | LOC_Os02g19220 | Os02g0294700 | - | Detail |
| C1H2g17594 | 2:10,308,996-10,309,388 | + | C2H2g13897 | - | - | Os02g0467300 | - | Detail |
| C1H2g23146 | 2:10,328,871-10,330,708 | - | - | CX2g020895 | - | Os06g0470500 | - | Detail |
| C1H2g29349 | 2:10,366,557-10,367,012 | + | C2H2g13295 | CX2g023642 | - | - | - | Detail |
| C1H2g13551 | 2:10,370,502-10,371,908 | + | C2H2g13295 | - | LOC_Os02g19280 | - | - | Detail |
| C1H2g09019 | 2:10,392,004-10,399,572 | - | C2H2g10272 | CX2g019687 | LOC_Os02g19330 | Os02g0295700 | - | Detail |
| C1H2g04273 | 2:10,403,215-10,407,546 | - | C2H2g22150 | CX2g024362 | LOC_Os02g19420 | Os02g0296400 | - | Detail |
| C1H2g09759 | 2:10,423,341-10,426,010 | + | C2H2g07281 | CX2g021654 | - | Os02g0594166 | - | Detail |
| C1H2g18879 | 2:10,428,202-10,433,465 | - | C2H2g17676 | - | LOC_Os02g19440 | Os02g0296800 | - | Detail |
| C1H2g08473 | 2:10,436,631-10,439,155 | + | C2H2g09661 | CX2g020745 | LOC_Os02g19450 | Os02g0297132 | - | Detail |
| C1H2g29514 | 2:10,450,301-10,450,660 | + | C2H2g12511 | CX2g019332 | - | Os02g0808300 | - | Detail |
| C1H2g12440 | 2:10,453,572-10,453,787 | - | C2H2g00010 | CX2g020667 | LOC_Os02g19470 | Os02g0297200 | - | Detail |
| C1H2g25591 | 2:10,454,266-10,456,305 | - | C2H2g00010 | CX2g020667 | LOC_Os02g19470 | Os02g0297200 | - | Detail |
| C1H2g23708 | 2:10,484,058-10,488,327 | + | C2H2g09993 | CX2g021008 | LOC_Os02g19510 | Os02g0297600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030929 | 3:4,605,437-4,606,410 | - | C1H3g04729 | C2H3g24222 | LOC_Os03g10210 | Os03g0198600 | HOX12, Oshox12, OsHox12, GT1 | Detail |
| CX3g028200 | 3:4,609,071-4,609,220 | + | - | - | - | - | - | Detail |
| CX3g026871 | 3:4,613,994-4,614,455 | + | - | - | LOC_Os09g39130 | Os09g0564800 | - | Detail |
| CX3g026889 | 3:4,627,875-4,629,870 | - | C1H3g23090 | C2H3g16295 | LOC_Os03g10220 | - | - | Detail |
| CX3g026154 | 3:4,630,812-4,633,715 | - | C1H3g13438 | C2H3g19804 | LOC_Os03g10224 | Os03g0198900 | - | Detail |
| CX3g028745 | 3:4,633,901-4,638,275 | + | C1H3g16749 | C2H3g09522 | LOC_Os03g10230 | Os03g0199000 | - | Detail |
| CX3g029096 | 3:4,643,197-4,644,372 | + | C1H3g12272 | C2H3g01585 | LOC_Os03g10240 | Os03g0199100 | - | Detail |
| CX3g031305 | 3:4,654,085-4,655,018 | - | C1H3g00274 | C2H3g23420 | LOC_Os03g10260 | Os03g0199500 | - | Detail |
| CX3g025392 | 3:4,671,843-4,673,085 | + | C1H3g07008 | C2H3g26891 | LOC_Os03g10300 | Os03g0200000 | - | Detail |
| CX3g029912 | 3:4,680,964-4,682,725 | + | C1H3g12286 | C2H3g01636 | LOC_Os03g10320 | Os03g0200200 | - | Detail |
| CX3g028962 | 3:4,688,899-4,689,504 | + | C1H3g29696 | C2H3g23926 | - | - | - | Detail |
| CX3g025427 | 3:4,690,738-4,692,702 | + | C1H3g13020 | C2H3g07176 | LOC_Os03g10340 | Os03g0200500 | - | Detail |
| CX3g027963 | 3:4,693,450-4,696,543 | - | C1H3g29298 | C2H3g17766 | LOC_Os03g10350 | Os03g0200600 | OsTPR075 | Detail |
| CX3g025362 | 3:4,701,236-4,703,268 | - | C1H3g01933 | C2H3g08890 | LOC_Os03g10360 | Os03g0200700 | - | Detail |
| CX3g031231 | 3:4,704,440-4,706,740 | - | C1H3g30301 | C2H3g09465 | LOC_Os03g10370 | Os03g0200800 | - | Detail |
| CX3g028366 | 3:4,710,479-4,712,645 | + | C1H3g28372 | C2H3g19650 | LOC_Os03g10390 | Os03g0201000 | - | Detail |
| CX3g026809 | 3:4,713,968-4,717,290 | - | C1H3g07769 | C2H3g21201 | LOC_Os03g10400 | Os03g0201100 | - | Detail |
| CX3g027641 | 3:4,720,018-4,722,399 | + | C1H3g26783 | C2H3g27980 | LOC_Os03g10420 | Os03g0201400 | - | Detail |
| CX3g026129 | 3:4,734,155-4,735,969 | + | C1H3g14289 | C2H3g05108 | LOC_Os03g10440 | Os03g0201500 | OsMORE1a | Detail |
| CX3g029780 | 3:4,736,952-4,739,174 | - | C1H3g07517 | C2H3g04674 | LOC_Os03g10450 | Os03g0201600 | - | Detail |