| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g05102 | 5:23,899,181-23,901,054 | + | C2H5g08711 | CX5g039086 | LOC_Os05g50770 | Os05g0584900 | - | Detail |
| C1H5g03901 | 5:23,907,339-23,909,665 | + | C2H5g19125 | CX5g036814 | LOC_Os05g50800 | Os05g0585400 | - | Detail |
| C1H5g16468 | 5:23,910,275-23,914,399 | - | C2H5g30392 | CX5g039624 | LOC_Os05g50810 | Os05g0585500 | OsCPK15 | Detail |
| C1H5g19912 | 5:23,916,451-23,917,138 | + | C2H5g27655 | - | LOC_Os05g50815 | Os05g0580900 | - | Detail |
| C1H5g12424 | 5:23,919,755-23,922,342 | - | C2H5g10246 | CX5g039076 | LOC_Os05g50820 | Os05g0585700 | - | Detail |
| C1H5g08867 | 5:23,925,086-23,927,161 | + | C2H5g21671 | CX5g037322 | LOC_Os05g50830 | Os05g0585800 | - | Detail |
| C1H5g02224 | 5:23,927,320-23,932,019 | - | C2H5g07511 | CX5g039391 | LOC_Os05g50840 | Os05g0585900 | - | Detail |
| C1H5g05725 | 5:23,955,193-23,960,476 | + | C2H5g12537 | CX5g037391 | LOC_Os05g50890 | Os05g0586200 | OsGH3-5, OsGH3.5, OsJAR1, JAR1 | Detail |
| C1H5g23433 | 5:23,963,202-23,965,330 | - | C2H5g22033 | CX5g040329 | LOC_Os05g50900 | Os05g0586300 | OsFAMA | Detail |
| C1H5g03676 | 5:23,967,831-23,973,608 | + | C2H5g28495 | CX5g037684 | LOC_Os05g50910 | Os05g0586400 | - | Detail |
| C1H5g31726 | 5:23,975,293-23,977,983 | + | C2H5g17335 | CX5g037746 | LOC_Os05g50920 | Os05g0586500 | - | Detail |
| C1H5g23972 | 5:23,978,930-23,983,305 | + | C2H5g13829 | CX5g037636 | LOC_Os05g50930 | Os05g0586700 | - | Detail |
| C1H5g28475 | 5:23,985,140-23,987,650 | + | C2H5g11484 | CX5g039824 | LOC_Os05g50950 | Os05g0586900 | - | Detail |
| C1H5g12900 | 5:23,988,579-23,990,873 | - | C2H5g29430 | CX5g038144 | LOC_Os05g50960 | Os05g0587000 | - | Detail |
| C1H5g28542 | 5:23,992,790-23,997,284 | - | C2H5g22520 | CX5g038565 | LOC_Os05g50970 | Os05g0587100 | - | Detail |
| C1H5g23902 | 5:24,000,126-24,004,336 | + | C2H5g13453 | CX5g038972 | LOC_Os05g50980 | Os05g0587200 | - | Detail |
| C1H5g05422 | 5:24,006,127-24,010,276 | - | C2H5g04498 | CX5g038828 | LOC_Os05g50990 | Os05g0587300 | - | Detail |
| C1H5g00207 | 5:24,019,486-24,021,971 | - | C2H5g26610 | CX5g039424 | LOC_Os05g51000 | Os05g0587400 | - | Detail |
| C1H5g22939 | 5:24,026,266-24,028,441 | - | C2H5g23551 | CX5g038264 | LOC_Os05g51020 | Os05g0587700 | - | Detail |
| C1H5g10111 | 5:24,036,513-24,039,279 | - | C2H5g16401 | CX5g040862 | LOC_Os05g51050 | Os05g0588100 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029849 | 3:4,472,362-4,475,626 | - | C1H3g06895 | C2H3g16863 | LOC_Os03g10060 | Os03g0196800 | - | Detail |
| CX3g025984 | 3:4,476,529-4,478,917 | - | C1H3g04009 | C2H3g14483 | LOC_Os03g10070 | Os03g0196900 | - | Detail |
| CX3g026285 | 3:4,480,324-4,483,656 | - | C1H3g04009 | C2H3g14483 | LOC_Os03g10080 | Os03g0197000 | - | Detail |
| CX3g027889 | 3:4,492,589-4,492,924 | + | - | - | - | - | - | Detail |
| CX3g028614 | 3:4,497,148-4,498,800 | + | C1H3g21235 | C2H3g28460 | LOC_Os03g10090 | Os03g0197100 | OsPLT1 | Detail |
| CX3g026156 | 3:4,514,291-4,515,952 | + | C1H3g09951 | C2H3g26739 | LOC_Os03g10100 | Os03g0197200 | OsPLT7 | Detail |
| CX3g027610 | 3:4,517,847-4,520,121 | + | C1H3g27125 | C2H3g12097 | LOC_Os03g10110 | Os03g0197300 | FLOC2 | Detail |
| CX3g029675 | 3:4,521,180-4,525,793 | - | C1H3g04901 | C2H3g26065 | LOC_Os03g10120 | Os03g0197400 | - | Detail |
| CX3g025798 | 3:4,526,846-4,527,235 | + | - | - | - | - | - | Detail |
| CX3g026551 | 3:4,537,800-4,540,270 | + | C1H3g09335 | C2H3g03055 | LOC_Os03g10140 | Os03g0197800 | - | Detail |
| CX3g027502 | 3:4,540,976-4,541,146 | + | - | - | - | - | - | Detail |
| CX3g029127 | 3:4,544,275-4,548,140 | + | C1H3g02056 | C2H3g07572 | - | Os03g0103000 | - | Detail |
| CX3g025524 | 3:4,553,570-4,553,761 | - | - | - | - | Os12g0542601 | - | Detail |
| CX3g028648 | 3:4,557,557-4,558,387 | - | C1H3g04546 | C2H3g06372 | LOC_Os03g10150 | Os03g0197900 | - | Detail |
| CX3g029881 | 3:4,564,260-4,564,709 | - | - | - | - | Os03g0198200 | - | Detail |
| CX3g028444 | 3:4,565,194-4,569,813 | + | C1H3g20431 | C2H3g11749 | LOC_Os03g10180 | Os03g0198300 | - | Detail |
| CX3g026265 | 3:4,572,167-4,577,091 | - | C1H3g23421 | C2H3g04323 | LOC_Os03g08400 | - | - | Detail |
| CX3g025719 | 3:4,581,297-4,590,881 | - | C1H3g03137 | C2H3g13794 | LOC_Os03g08400 | Os03g0344300 | OsFUG1, OsFUG1.3 | Detail |
| CX3g030601 | 3:4,591,713-4,594,682 | + | C1H3g27623 | C2H3g19159 | LOC_Os03g10190 | Os03g0198400 | - | Detail |
| CX3g031306 | 3:4,601,053-4,603,398 | + | C1H3g02850 | C2H3g09921 | LOC_Os03g10200 | Os03g0198500 | - | Detail |