| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H6g14276 | 6:2,409,330-2,409,740 | - | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160100 | - | Detail |
| C2H6g13336 | 6:2,410,289-2,410,699 | + | C1H6g00179 | CX6g042400 | LOC_Os06g06510 | Os06g0160100 | - | Detail |
| C2H6g17841 | 6:2,411,428-2,412,749 | - | C1H6g10484 | CX6g042432 | LOC_Os06g06520 | Os06g0160200 | - | Detail |
| C2H6g26766 | 6:2,412,783-2,413,085 | - | C1H6g06000 | CX6g042432 | LOC_Os06g06520 | Os06g0160200 | - | Detail |
| C2H6g20170 | 6:2,415,673-2,419,060 | - | C1H6g16222 | CX6g044314 | LOC_Os06g06530 | Os06g0160400 | HGW | Detail |
| C2H6g19792 | 6:2,425,862-2,428,256 | - | C1H6g16022 | CX6g045401 | LOC_Os06g06550 | Os06g0160600 | - | Detail |
| C2H6g23161 | 6:2,429,699-2,437,037 | - | C1H6g13902 | CX6g043739 | LOC_Os06g06560 | Os06g0160700 | SSI, OsSSI, SSS 1, SSS1, SS1 | Detail |
| C2H6g04920 | 6:2,440,742-2,441,143 | - | - | CX6g042247 | LOC_Os06g06570 | Os06g0160800 | - | Detail |
| C2H6g21185 | 6:2,447,612-2,448,320 | + | C1H6g16824 | CX6g043772 | LOC_Os06g06610 | Os06g0161400 | - | Detail |
| C2H6g23055 | 6:2,459,795-2,461,268 | + | C1H6g25939 | CX6g045596 | LOC_Os06g06660 | Os06g0161800 | - | Detail |
| C2H6g19839 | 6:2,463,500-2,464,735 | + | C1H6g28340 | CX6g045596 | LOC_Os06g06670 | Os06g0161900 | - | Detail |
| C2H6g03972 | 6:2,466,564-2,467,051 | + | C1H6g28340 | - | - | - | - | Detail |
| C2H6g09639 | 6:2,467,292-2,468,545 | + | C1H6g29965 | CX6g045596 | LOC_Os06g06680 | Os06g0162100 | - | Detail |
| C2H6g11445 | 6:2,472,834-2,473,430 | + | C1H6g29965 | - | LOC_Os06g06580 | Os06g0161100 | - | Detail |
| C2H6g23738 | 6:2,491,525-2,493,444 | + | C1H6g05484 | CX6g045922 | LOC_Os06g06720 | Os06g0162500 | - | Detail |
| C2H6g27712 | 6:2,494,006-2,505,037 | - | C1H6g16792 | CX6g045009 | LOC_Os06g06730 | Os06g0162550 | OsZAS2 | Detail |
| C2H6g18003 | 6:2,506,220-2,508,521 | + | C1H6g20899 | CX6g044673 | LOC_Os06g06740 | Os06g0162700 | - | Detail |
| C2H6g28937 | 6:2,509,188-2,515,333 | - | C1H6g08500 | CX6g042913 | LOC_Os06g06750 | Os06g0162800 | OsMADS5 | Detail |
| C2H6g12221 | 6:2,520,562-2,521,083 | - | - | CX6g042202 | - | - | - | Detail |
| C2H6g12042 | 6:2,521,710-2,526,662 | - | C1H6g00041 | CX6g044205 | LOC_Os06g06760 | Os06g0163000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029059 | 3:4,154,154-4,161,517 | - | C1H3g14873 | C2H3g07809 | LOC_Os03g09100 | Os03g0191000 | SCT1 | Detail |
| CX3g025401 | 3:4,165,455-4,168,252 | - | C1H3g14873 | C2H3g15678 | LOC_Os03g09110 | Os03g0191100 | - | Detail |
| CX3g026471 | 3:4,174,305-4,175,286 | - | C1H3g14671 | C2H3g21550 | LOC_Os03g09120 | Os03g0191200 | - | Detail |
| CX3g028388 | 3:4,186,815-4,189,163 | + | C1H3g14495 | C2H3g28466 | LOC_Os03g09140 | Os03g0191400 | OsRab6B2, OsRab6a | Detail |
| CX3g027338 | 3:4,191,877-4,195,751 | - | C1H3g25069 | C2H3g00905 | LOC_Os03g09150 | Os03g0191700 | - | Detail |
| CX3g029377 | 3:4,198,065-4,198,883 | + | C1H3g30469 | C2H3g19135 | LOC_Os03g09160 | Os03g0191800 | - | Detail |
| CX3g028606 | 3:4,204,913-4,205,803 | - | C1H3g18769 | C2H3g16037 | LOC_Os03g09170 | Os03g0191900 | - | Detail |
| CX3g025223 | 3:4,210,539-4,213,745 | - | C1H3g13867 | C2H3g14345 | LOC_Os03g09180 | Os03g0192000 | - | Detail |
| CX3g026535 | 3:4,214,259-4,216,382 | + | C1H3g13109 | C2H3g00220 | LOC_Os03g09190 | Os03g0192100 | - | Detail |
| CX3g029681 | 3:4,217,108-4,220,022 | - | C1H3g24183 | C2H3g04064 | LOC_Os03g09200 | Os03g0192300 | - | Detail |
| CX3g026243 | 3:4,232,013-4,234,275 | - | C1H3g22125 | C2H3g23777 | LOC_Os03g09210 | Os03g0192400 | - | Detail |
| CX3g025389 | 3:4,239,360-4,244,356 | + | C1H3g21423 | C2H3g14962 | LOC_Os03g09220 | Os03g0192500 | PP45, OsPP45, BIPP2C1 | Detail |
| CX3g029005 | 3:4,245,050-4,246,335 | - | C1H3g29007 | C2H3g01547 | LOC_Os03g09230 | Os03g0192600 | - | Detail |
| CX3g028884 | 3:4,249,607-4,253,382 | - | C1H3g26414 | C2H3g00630 | LOC_Os03g09250 | Os03g0192700 | INO1, RINO1 | Detail |
| CX3g027446 | 3:4,263,865-4,270,941 | + | C1H3g18179 | C2H3g01275 | LOC_Os03g09260 | Os03g0192900 | - | Detail |
| CX3g025926 | 3:4,278,228-4,279,760 | + | C1H3g11049 | C2H3g19711 | LOC_Os03g09280 | Os03g0193000 | - | Detail |
| CX3g025810 | 3:4,282,308-4,284,485 | + | C1H3g04153 | C2H3g11800 | LOC_Os03g09290 | Os03g0193075 | - | Detail |
| CX3g028060 | 3:4,285,272-4,287,484 | + | C1H3g25160 | C2H3g07804 | LOC_Os03g09300 | Os03g0191700 | - | Detail |
| CX3g027000 | 3:4,289,233-4,293,559 | - | C1H3g05489 | C2H3g11506 | LOC_Os03g09310 | Os03g0193225 | - | Detail |
| CX3g026217 | 3:4,300,810-4,301,751 | + | C1H3g15014 | C2H3g05261 | LOC_Os03g09820 | Os03g0193600 | - | Detail |