| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H2g22765 | 2:28,236,918-28,237,175 | - | C1H2g07594 | CX2g023200 | - | Os02g0736700 | - | Detail |
| C2H2g11611 | 2:28,240,281-28,240,817 | - | - | CX2g022254 | - | Os02g0736900 | - | Detail |
| C2H2g25731 | 2:28,245,225-28,245,455 | + | - | - | LOC_Os02g50400 | Os02g0737300 | - | Detail |
| C2H2g21919 | 2:28,251,181-28,251,420 | + | C1H2g14249 | - | LOC_Os02g50450 | Os02g0738100 | - | Detail |
| C2H2g10969 | 2:28,257,712-28,259,079 | - | C1H2g14103 | CX2g023707 | LOC_Os02g50460 | Os02g0738200 | - | Detail |
| C2H2g16308 | 2:28,277,648-28,283,562 | + | C1H2g00500 | CX2g021204 | LOC_Os02g50480 | Os02g0738400 | OHK5, OHK5, Ohk5, OsHK1, OsHK6, HK, Crl1a | Detail |
| C2H2g12754 | 2:28,294,300-28,298,676 | + | C1H2g09387 | CX2g020936 | LOC_Os02g50490 | Os02g0738600 | - | Detail |
| C2H2g25440 | 2:28,300,139-28,310,024 | - | C1H2g28406 | CX2g022539 | LOC_Os02g50550 | Os02g0738900 | BC3, bc3, bc-3, OsDRP2B, DRP2B | Detail |
| C2H2g10338 | 2:28,311,660-28,320,928 | + | C1H2g06055 | CX2g024755 | LOC_Os02g50560 | Os02g0739000 | - | Detail |
| C2H2g19070 | 2:28,320,855-28,325,288 | - | C1H2g22155 | CX2g024527 | LOC_Os02g50570 | Os02g0739100 | - | Detail |
| C2H2g12798 | 2:28,334,593-28,335,726 | - | C1H2g26267 | CX2g023617 | LOC_Os02g50600 | Os02g0739400 | - | Detail |
| C2H2g13279 | 2:28,345,355-28,349,094 | - | C1H2g19740 | CX2g023255 | LOC_Os02g50620 | Os02g0739600 | - | Detail |
| C2H2g20599 | 2:28,350,795-28,353,624 | - | C1H2g02446 | CX2g021394 | LOC_Os02g50630 | Os02g0739700 | OsE2Fe-1 | Detail |
| C2H2g22496 | 2:28,356,473-28,360,636 | - | C1H2g01602 | CX2g023514 | LOC_Os02g50640 | Os02g0739900 | - | Detail |
| C2H2g07910 | 2:28,375,801-28,381,895 | - | C1H2g14498 | CX2g021304 | LOC_Os02g50680 | Os02g0740300 | - | Detail |
| C2H2g25866 | 2:28,382,669-28,384,104 | - | C1H2g26149 | CX2g024066 | LOC_Os02g50690 | Os02g0740400 | - | Detail |
| C2H2g26692 | 2:28,387,924-28,388,874 | + | C1H2g27425 | CX2g023069 | LOC_Os02g50700 | Os02g0740500 | - | Detail |
| C2H2g23006 | 2:28,390,599-28,390,880 | - | C1H2g04140 | CX2g024544 | LOC_Os02g50710 | Os02g0740600 | - | Detail |
| C2H2g13251 | 2:28,392,972-28,393,480 | + | - | - | - | - | - | Detail |
| C2H2g10045 | 2:28,393,015-28,394,133 | - | - | CX2g019920 | LOC_Os02g50730 | Os02g0740700 | OsMMP1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030287 | 3:4,019,413-4,021,432 | - | C1H3g08919 | C2H3g15703 | LOC_Os03g08850 | Os03g0187500 | - | Detail |
| CX3g026706 | 3:4,027,035-4,028,995 | + | C1H3g13450 | C2H3g10684 | LOC_Os03g08860 | Os03g0187600 | OsGRAM | Detail |
| CX3g030725 | 3:4,031,175-4,032,955 | + | C1H3g23881 | C2H3g13978 | LOC_Os03g08870 | Os03g0187700 | - | Detail |
| CX3g025062 | 3:4,034,129-4,035,328 | - | C1H3g03880 | C2H3g19491 | LOC_Os03g08880 | Os03g0187800 | OsPUP1 | Detail |
| CX3g031032 | 3:4,047,375-4,052,991 | + | C1H3g16094 | C2H3g07130 | LOC_Os03g08900 | Os03g0188100 | OsMATE1 | Detail |
| CX3g024958 | 3:4,053,976-4,055,037 | - | C1H3g05331 | C2H3g06873 | LOC_Os03g08920 | Os03g0188200 | - | Detail |
| CX3g029018 | 3:4,066,691-4,068,068 | + | C1H3g20727 | C2H3g17114 | LOC_Os03g08930 | Os03g0188400 | OsbHLH96 | Detail |
| CX3g028320 | 3:4,082,687-4,082,848 | - | - | - | - | - | - | Detail |
| CX3g028802 | 3:4,090,768-4,091,676 | + | C1H3g17061 | C2H3g19207 | LOC_Os03g08960 | Os03g0188900 | - | Detail |
| CX3g026805 | 3:4,098,514-4,099,044 | + | C1H3g18298 | C2H3g07421 | LOC_Os03g08970 | Os03g0189100 | - | Detail |
| CX3g027676 | 3:4,102,866-4,104,191 | - | C1H3g19818 | C2H3g08533 | LOC_Os03g08980 | Os03g0189300 | - | Detail |
| CX3g030934 | 3:4,112,546-4,115,296 | - | C1H3g25212 | C2H3g07018 | LOC_Os03g09020 | Os03g0189600 | - | Detail |
| CX3g029170 | 3:4,120,698-4,120,961 | - | - | - | - | - | - | Detail |
| CX3g030414 | 3:4,123,932-4,124,813 | + | C1H3g17759 | C2H3g15705 | LOC_Os03g09045 | Os03g0190000 | - | Detail |
| CX3g029542 | 3:4,127,063-4,129,318 | - | C1H3g10345 | C2H3g04200 | LOC_Os03g09060 | Os03g0190100 | - | Detail |
| CX3g031332 | 3:4,132,189-4,135,124 | - | C1H3g09287 | C2H3g20959 | LOC_Os03g09070 | Os03g0190300 | - | Detail |
| CX3g029204 | 3:4,136,802-4,137,041 | - | C1H3g02100 | - | - | Os03g0190500 | - | Detail |
| CX3g029629 | 3:4,140,366-4,142,146 | - | - | - | - | - | - | Detail |
| CX3g031087 | 3:4,142,966-4,146,509 | - | C1H3g05709 | C2H3g15387 | LOC_Os03g09080 | Os03g0190800 | - | Detail |
| CX3g028138 | 3:4,148,404-4,151,479 | - | C1H3g10832 | C2H3g01761 | LOC_Os03g09090 | Os03g0190900 | - | Detail |