| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g02353 | 1:11,674,300-11,679,910 | + | C1H1g28713 | CX1g000663 | LOC_Os01g24060 | Os01g0343200 | - | Detail |
| C2H1g26949 | 1:11,685,554-11,687,349 | + | C1H1g18384 | CX1g001080 | LOC_Os01g24070 | Os01g0343300 | OsGATA8 | Detail |
| C2H1g05738 | 1:11,696,982-11,699,421 | - | C1H1g01015 | CX1g003896 | LOC_Os01g24090 | Os01g0343500 | - | Detail |
| C2H1g07085 | 1:11,827,376-11,830,076 | + | - | - | LOC_Os01g27449 | Os01g0372100 | - | Detail |
| C2H1g16748 | 1:11,899,919-11,901,719 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g05112 | 1:11,937,505-11,943,811 | + | C1H1g27449 | CX1g005895 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g30571 | 1:11,948,445-11,952,134 | - | C1H1g01597 | CX1g001516 | LOC_Os06g08450 | Os06g0183200 | HK2, OHK1, HK, OsHK2, Ohk1 | Detail |
| C2H1g15253 | 1:11,954,093-11,955,767 | - | - | - | - | - | - | Detail |
| C2H1g16729 | 1:11,956,738-11,959,165 | - | - | - | - | - | - | Detail |
| C2H1g03429 | 1:12,036,103-12,038,238 | + | C1H1g12059 | CX1g004622 | LOC_Os01g26980 | Os01g0738500 | - | Detail |
| C2H1g13415 | 1:12,067,581-12,069,632 | + | C1H1g13768 | CX1g001811 | - | Os01g0527900 | - | Detail |
| C2H1g07465 | 1:12,086,685-12,087,860 | + | C1H1g21970 | CX1g002117 | LOC_Os01g24420 | Os01g0346250 | - | Detail |
| C2H1g25406 | 1:12,110,695-12,115,118 | + | C1H1g27382 | CX1g002994 | LOC_Os01g24470 | Os01g0347000 | - | Detail |
| C2H1g02246 | 1:12,115,613-12,120,143 | - | C1H1g08071 | CX1g000129 | LOC_Os01g24480 | Os01g0347100 | - | Detail |
| C2H1g19331 | 1:12,125,101-12,126,796 | - | C1H1g27053 | CX1g002181 | LOC_Os01g24490 | Os01g0347200 | - | Detail |
| C2H1g13817 | 1:12,132,010-12,134,037 | + | C1H1g27449 | CX1g006871 | LOC_Os01g24500 | Os01g0347300 | - | Detail |
| C2H1g12753 | 1:12,181,907-12,186,318 | - | C1H1g04145 | CX1g004547 | - | Os01g0852650 | - | Detail |
| C2H1g06141 | 1:12,187,581-12,188,746 | - | C1H1g09482 | CX1g001042 | LOC_Os01g24600 | Os01g0347500 | - | Detail |
| C2H1g29017 | 1:12,191,860-12,192,978 | + | C1H1g19481 | CX1g002830 | LOC_Os01g24560 | Os01g0347600 | - | Detail |
| C2H1g00502 | 1:12,208,552-12,209,729 | + | C1H1g19455 | CX1g004946 | LOC_Os01g24550 | Os01g0348000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028169 | 3:3,886,117-3,888,240 | - | C1H3g06804 | C2H3g20986 | LOC_Os03g08640 | Os03g0184700 | OsORC2 | Detail |
| CX3g031060 | 3:3,889,411-3,889,600 | - | C1H3g20941 | C2H1g09490 | LOC_Os01g63150 | Os01g0850200 | - | Detail |
| CX3g028411 | 3:3,899,501-3,900,427 | + | C1H3g17927 | C2H3g00273 | LOC_Os03g08660 | Os03g0185000 | OsSAT2;1 | Detail |
| CX3g025419 | 3:3,906,652-3,910,168 | - | C1H3g12755 | C2H3g11839 | LOC_Os03g08680 | Os03g0185200 | - | Detail |
| CX3g025760 | 3:3,913,967-3,915,127 | - | C1H3g28231 | C2H3g29116 | LOC_Os03g08690 | Os03g0185400 | - | Detail |
| CX3g030578 | 3:3,917,170-3,923,385 | + | C1H3g23204 | C2H3g02824 | LOC_Os03g08700 | Os03g0185500 | - | Detail |
| CX3g029404 | 3:3,924,214-3,924,591 | + | C1H3g14315 | C2H3g03896 | LOC_Os03g08710 | Os03g0185600 | - | Detail |
| CX3g029210 | 3:3,927,010-3,928,368 | - | C1H3g08110 | C2H3g03932 | LOC_Os03g08720 | Os03g0185700 | - | Detail |
| CX3g028148 | 3:3,930,464-3,934,450 | + | C1H3g08230 | C2H3g26196 | LOC_Os03g08730 | Os03g0186100 | - | Detail |
| CX3g031324 | 3:3,947,697-3,952,677 | + | C1H3g25573 | C2H3g17224 | LOC_Os03g08740 | Os03g0186500 | - | Detail |
| CX3g029023 | 3:3,953,938-3,960,474 | - | C1H3g14880 | C2H3g18825 | LOC_Os03g08754 | Os03g0186600 | OsMDP1, OsMADS47 | Detail |
| CX3g029172 | 3:3,967,114-3,969,672 | + | C1H3g04910 | C2H3g28859 | LOC_Os03g08770 | Os03g0186800 | - | Detail |
| CX3g026841 | 3:3,974,560-3,975,882 | + | C1H3g01713 | C2H3g12420 | LOC_Os03g08790 | Os03g0186900 | OsAP25 | Detail |
| CX3g028992 | 3:3,976,665-3,978,447 | - | C1H3g01138 | C2H3g16083 | LOC_Os03g08800 | Os03g0186950 | - | Detail |
| CX3g028590 | 3:3,978,708-3,981,105 | + | C1H3g25676 | C2H3g01321 | LOC_Os03g08810 | Os03g0187000 | - | Detail |
| CX3g025108 | 3:3,983,000-3,983,200 | + | - | - | - | - | - | Detail |
| CX3g028907 | 3:3,985,383-3,993,859 | + | C1H3g24115 | C2H3g18803 | LOC_Os03g08820 | Os03g0187100 | - | Detail |
| CX3g027040 | 3:3,995,661-4,003,363 | + | C1H3g08043 | C2H3g23594 | LOC_Os03g08830 | Os03g0187300 | - | Detail |
| CX3g029815 | 3:4,004,551-4,004,790 | + | - | - | - | - | - | Detail |
| CX3g027060 | 3:4,008,198-4,010,078 | + | C1H3g31610 | C2H3g02517 | LOC_Os03g08840 | Os03g0187400 | - | Detail |