| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g01547 | 5:106,399-109,185 | - | C2H5g11548 | CX5g038525 | LOC_Os05g01120 | Os05g0101600 | - | Detail |
| C1H5g21429 | 5:128,582-132,259 | + | C2H5g11343 | CX5g040553 | LOC_Os05g01190 | Os05g0102300 | - | Detail |
| C1H5g12210 | 5:133,279-134,049 | + | C2H5g29002 | CX5g038962 | LOC_Os05g01200 | Os05g0102400 | - | Detail |
| C1H5g24021 | 5:134,669-136,790 | - | C2H5g25831 | CX5g039033 | LOC_Os05g01210 | Os05g0102500 | - | Detail |
| C1H5g11428 | 5:140,057-144,954 | + | C2H5g09707 | CX5g037244 | LOC_Os05g01230 | Os05g0102600 | - | Detail |
| C1H5g05413 | 5:145,472-153,356 | - | C2H5g01721 | CX5g038484 | LOC_Os05g01240 | Os05g0102800 | - | Detail |
| C1H5g16359 | 5:163,068-165,978 | + | C2H5g05131 | CX5g040550 | LOC_Os05g01250 | Os05g0102900 | - | Detail |
| C1H5g27377 | 5:168,084-170,171 | - | C2H5g28008 | CX5g037761 | LOC_Os05g01256 | Os05g0103000 | - | Detail |
| C1H5g28308 | 5:171,065-173,451 | - | C2H5g14971 | CX5g038148 | LOC_Os05g01262 | Os05g0103100 | - | Detail |
| C1H5g30548 | 5:174,490-176,978 | + | C2H5g18349 | CX5g039900 | LOC_Os05g01270 | Os05g0103200 | - | Detail |
| C1H5g25959 | 5:192,316-196,149 | - | C2H5g25073 | CX5g040155 | LOC_Os05g01310 | Os05g0103600 | - | Detail |
| C1H5g00386 | 5:196,952-200,155 | - | C2H5g19367 | CX5g037279 | LOC_Os05g01320 | Os05g0103700 | - | Detail |
| C1H5g16700 | 5:202,479-203,950 | - | C2H5g05200 | CX5g037112 | LOC_Os05g01330 | Os05g0103800 | - | Detail |
| C1H5g29606 | 5:207,204-211,349 | + | C2H5g18611 | CX5g040057 | LOC_Os05g01350 | Os05g0104000 | - | Detail |
| C1H5g00400 | 5:212,621-220,033 | + | C2H5g24643 | CX5g040235 | LOC_Os05g01360 | Os05g0104100 | - | Detail |
| C1H5g15746 | 5:220,707-221,741 | + | C2H5g21529 | CX5g038227 | LOC_Os05g01370 | Os05g0104150 | PGIP2, Ospgip2, pgip2, OsPGIP2 | Detail |
| C1H5g23583 | 5:223,602-224,531 | + | C2H5g16478 | CX5g038227 | LOC_Os05g01380 | Os05g0104200 | PGIP1, Ospgip1, pgip1, OsPGIP1 | Detail |
| C1H5g17625 | 5:225,013-226,041 | + | C2H5g22812 | CX5g038227 | LOC_Os05g01430 | Os05g0104600 | PGIP3, Ospgip3, pgip3, OsPGIP3 | Detail |
| C1H5g17368 | 5:227,835-233,750 | + | C2H5g01578 | CX5g038022 | LOC_Os05g01440 | Os05g0104650 | - | Detail |
| C1H5g26046 | 5:236,309-238,447 | - | C2H5g13110 | CX5g039427 | LOC_Os05g01450 | Os05g0104800 | EIF3F, eIF-3f, OseIF3f | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g028169 | 3:3,886,117-3,888,240 | - | C1H3g06804 | C2H3g20986 | LOC_Os03g08640 | Os03g0184700 | OsORC2 | Detail |
| CX3g031060 | 3:3,889,411-3,889,600 | - | C1H3g20941 | C2H1g09490 | LOC_Os01g63150 | Os01g0850200 | - | Detail |
| CX3g028411 | 3:3,899,501-3,900,427 | + | C1H3g17927 | C2H3g00273 | LOC_Os03g08660 | Os03g0185000 | OsSAT2;1 | Detail |
| CX3g025419 | 3:3,906,652-3,910,168 | - | C1H3g12755 | C2H3g11839 | LOC_Os03g08680 | Os03g0185200 | - | Detail |
| CX3g025760 | 3:3,913,967-3,915,127 | - | C1H3g28231 | C2H3g29116 | LOC_Os03g08690 | Os03g0185400 | - | Detail |
| CX3g030578 | 3:3,917,170-3,923,385 | + | C1H3g23204 | C2H3g02824 | LOC_Os03g08700 | Os03g0185500 | - | Detail |
| CX3g029404 | 3:3,924,214-3,924,591 | + | C1H3g14315 | C2H3g03896 | LOC_Os03g08710 | Os03g0185600 | - | Detail |
| CX3g029210 | 3:3,927,010-3,928,368 | - | C1H3g08110 | C2H3g03932 | LOC_Os03g08720 | Os03g0185700 | - | Detail |
| CX3g028148 | 3:3,930,464-3,934,450 | + | C1H3g08230 | C2H3g26196 | LOC_Os03g08730 | Os03g0186100 | - | Detail |
| CX3g031324 | 3:3,947,697-3,952,677 | + | C1H3g25573 | C2H3g17224 | LOC_Os03g08740 | Os03g0186500 | - | Detail |
| CX3g029023 | 3:3,953,938-3,960,474 | - | C1H3g14880 | C2H3g18825 | LOC_Os03g08754 | Os03g0186600 | OsMDP1, OsMADS47 | Detail |
| CX3g029172 | 3:3,967,114-3,969,672 | + | C1H3g04910 | C2H3g28859 | LOC_Os03g08770 | Os03g0186800 | - | Detail |
| CX3g026841 | 3:3,974,560-3,975,882 | + | C1H3g01713 | C2H3g12420 | LOC_Os03g08790 | Os03g0186900 | OsAP25 | Detail |
| CX3g028992 | 3:3,976,665-3,978,447 | - | C1H3g01138 | C2H3g16083 | LOC_Os03g08800 | Os03g0186950 | - | Detail |
| CX3g028590 | 3:3,978,708-3,981,105 | + | C1H3g25676 | C2H3g01321 | LOC_Os03g08810 | Os03g0187000 | - | Detail |
| CX3g025108 | 3:3,983,000-3,983,200 | + | - | - | - | - | - | Detail |
| CX3g028907 | 3:3,985,383-3,993,859 | + | C1H3g24115 | C2H3g18803 | LOC_Os03g08820 | Os03g0187100 | - | Detail |
| CX3g027040 | 3:3,995,661-4,003,363 | + | C1H3g08043 | C2H3g23594 | LOC_Os03g08830 | Os03g0187300 | - | Detail |
| CX3g029815 | 3:4,004,551-4,004,790 | + | - | - | - | - | - | Detail |
| CX3g027060 | 3:4,008,198-4,010,078 | + | C1H3g31610 | C2H3g02517 | LOC_Os03g08840 | Os03g0187400 | - | Detail |