| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H5g18074 | 5:340,023-348,456 | + | C1H5g07348 | CX5g037999 | LOC_Os05g01690 | Os05g0107300 | - | Detail |
| C2H5g27472 | 5:350,876-362,780 | - | C1H5g18030 | CX5g038302 | LOC_Os05g01700 | Os05g0107600 | - | Detail |
| C2H5g16843 | 5:366,997-372,681 | + | C1H5g19380 | CX5g040021 | LOC_Os05g01710 | Os05g0107700 | - | Detail |
| C2H5g11892 | 5:376,755-378,797 | + | C1H5g20325 | CX5g040582 | LOC_Os05g01730 | Os05g0107900 | - | Detail |
| C2H5g21168 | 5:379,070-383,458 | - | C1H5g28813 | CX5g040580 | LOC_Os05g01750 | Os05g0108000 | - | Detail |
| C2H5g06480 | 5:383,937-388,179 | - | C1H5g21368 | CX5g039887 | LOC_Os05g01760 | Os05g0108100 | - | Detail |
| C2H5g09053 | 5:394,222-399,108 | + | C1H5g15185 | CX5g039387 | LOC_Os05g01780 | Os05g0108300 | - | Detail |
| C2H5g05095 | 5:400,945-401,862 | + | - | CX5g038082 | LOC_Os05g01790 | Os05g0108400 | - | Detail |
| C2H5g04330 | 5:406,462-406,758 | + | C1H5g01513 | CX5g040070 | LOC_Os05g10980 | Os05g0198700 | - | Detail |
| C2H5g29127 | 5:408,860-411,112 | + | C1H5g26822 | CX5g038883 | LOC_Os05g01810 | Os05g0108600 | - | Detail |
| C2H5g11304 | 5:413,016-414,935 | + | C1H5g12608 | CX5g039990 | LOC_Os05g01820 | Os05g0108800 | - | Detail |
| C2H5g10600 | 5:415,753-416,730 | - | C1H5g12767 | CX5g040088 | LOC_Os05g01900 | Os05g0109100 | - | Detail |
| C2H5g20027 | 5:417,454-419,793 | - | C1H5g28978 | CX5g040088 | LOC_Os05g01830 | Os05g0109100 | - | Detail |
| C2H5g07079 | 5:422,931-428,388 | + | C1H5g28978 | CX5g040088 | LOC_Os05g01900 | Os05g0109400 | - | Detail |
| C2H5g16158 | 5:428,846-434,892 | - | C1H5g13270 | CX5g040571 | LOC_Os05g01910 | Os05g0109600 | - | Detail |
| C2H5g30479 | 5:459,982-460,377 | + | C1H5g31686 | - | LOC_Os05g01950 | Os05g0110100 | - | Detail |
| C2H5g05509 | 5:468,500-477,924 | + | C1H5g07744 | CX5g039239 | LOC_Os05g01970 | Os05g0110300 | - | Detail |
| C2H5g14884 | 5:471,191-473,005 | - | C1H5g08931 | CX5g037835 | - | Os05g0574900 | OsSLRL2 | Detail |
| C2H5g28803 | 5:479,326-485,117 | + | C1H5g02397 | CX5g040128 | LOC_Os05g01990 | Os05g0110500 | OsRH17 | Detail |
| C2H5g24617 | 5:485,453-486,877 | - | C1H5g00170 | CX5g039122 | LOC_Os05g01994 | Os05g0110600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026682 | 3:3,588,933-3,598,699 | - | C1H3g16865 | C2H3g08383 | LOC_Os03g08100 | Os03g0178500 | - | Detail |
| CX3g027590 | 3:3,602,535-3,609,102 | + | C1H3g20528 | C2H3g04420 | LOC_Os03g08140 | Os03g0179000 | OsTTLL12 | Detail |
| CX3g028669 | 3:3,623,873-3,628,735 | + | C1H3g20366 | C2H3g08147 | LOC_Os03g08170 | Os03g0179400 | RLCK103, GUDK, OsRLCK103 | Detail |
| CX3g028526 | 3:3,632,052-3,632,877 | - | C1H3g12127 | C2H3g15441 | LOC_Os03g08200 | Os03g0179700 | - | Detail |
| CX3g028986 | 3:3,636,551-3,642,437 | + | C1H3g24405 | C2H3g12971 | LOC_Os03g08220 | Os03g0179900 | - | Detail |
| CX3g028266 | 3:3,644,480-3,646,399 | - | C1H3g02343 | C2H3g00189 | LOC_Os03g08230 | Os03g0180000 | - | Detail |
| CX3g030311 | 3:3,650,195-3,650,620 | - | C1H3g14063 | C2H3g00572 | LOC_Os03g08250 | Os03g0180100 | - | Detail |
| CX3g029641 | 3:3,655,501-3,660,006 | + | C1H3g29143 | C2H3g21163 | LOC_Os03g08270 | Os03g0180300 | - | Detail |
| CX3g028474 | 3:3,660,736-3,662,970 | - | C1H3g14724 | C2H3g26539 | LOC_Os03g08280 | Os03g0180400 | OsPAA1 | Detail |
| CX3g029186 | 3:3,668,491-3,668,664 | - | - | - | - | - | - | Detail |
| CX3g030332 | 3:3,670,864-3,671,821 | + | C1H3g22681 | C2H3g28919 | LOC_Os03g08290 | Os03g0180600 | - | Detail |
| CX3g025940 | 3:3,672,367-3,676,368 | - | C1H6g25657 | C2H6g19648 | LOC_Os03g08300 | Os03g0180700 | - | Detail |
| CX3g028990 | 3:3,682,059-3,682,595 | - | C1H3g29454 | C2H3g02101 | LOC_Os03g08310 | Os03g0180800 | TIFY11A, OsJAZ3, OsJAZ 9, OsJAZ9, OsTIFY11a, JAZ9 | Detail |
| CX3g028324 | 3:3,686,362-3,687,226 | + | C1H3g20655 | C2H3g09847 | LOC_Os03g08320 | Os03g0180900 | OsJAZ11 | Detail |
| CX3g026192 | 3:3,694,198-3,694,758 | + | C1H3g10433 | C2H3g19227 | LOC_Os03g08330 | Os03g0181100 | - | Detail |
| CX3g025929 | 3:3,704,999-3,706,264 | + | C1H3g18608 | C2H3g22563 | LOC_Os03g08350 | Os03g0181400 | - | Detail |
| CX3g029590 | 3:3,710,971-3,714,518 | + | C1H3g16121 | C2H3g27023 | LOC_Os03g08360 | Os03g0181500 | ONI1, OsCUT4 | Detail |
| CX3g030922 | 3:3,717,437-3,721,152 | + | C1H3g01704 | C2H3g06913 | LOC_Os03g08370 | Os03g0181600 | - | Detail |
| CX3g030111 | 3:3,723,371-3,728,985 | + | C1H3g27694 | C2H3g27575 | LOC_Os03g08380 | Os03g0181750 | - | Detail |
| CX3g028124 | 3:3,733,165-3,735,585 | + | C1H3g16917 | C2H3g19710 | LOC_Os03g08390 | Os03g0181800 | - | Detail |