| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g04438 | 3:28,180,645-28,199,692 | + | C1H3g24639 | CX3g030953 | LOC_Os03g53650 | Os03g0747900 | OsMyoXIE-1, OsMyoXIE | Detail |
| C2H3g18336 | 3:28,203,426-28,207,552 | + | C1H3g16019 | CX3g027311 | LOC_Os03g53670 | Os03g0748000 | - | Detail |
| C2H3g11510 | 3:28,216,516-28,220,107 | + | C1H3g23351 | CX3g030125 | LOC_Os03g53700 | Os03g0748200 | - | Detail |
| C2H3g13290 | 3:28,221,230-28,224,833 | - | C1H3g03701 | CX3g025504 | LOC_Os03g53710 | Os03g0748300 | - | Detail |
| C2H3g11594 | 3:28,228,448-28,232,063 | + | C1H3g01499 | CX3g028761 | LOC_Os03g53720 | Os03g0748400 | - | Detail |
| C2H3g19078 | 3:28,232,881-28,233,737 | - | C1H3g16971 | CX3g026934 | LOC_Os03g53730 | Os03g0748500 | - | Detail |
| C2H3g00251 | 3:28,234,108-28,234,826 | + | C1H3g08884 | CX3g025608 | LOC_Os03g53740 | Os03g0748600 | - | Detail |
| C2H3g14266 | 3:28,235,350-28,239,915 | - | C1H3g17123 | CX3g030809 | LOC_Os03g53750 | Os03g0748700 | - | Detail |
| C2H3g05037 | 3:28,240,664-28,247,782 | - | C1H3g07089 | CX3g025195 | LOC_Os03g53760 | Os03g0748800 | - | Detail |
| C2H3g13679 | 3:28,251,164-28,255,231 | + | C1H3g00309 | CX3g031121 | LOC_Os03g53770 | Os03g0748900 | - | Detail |
| C2H3g30032 | 3:28,259,712-28,262,204 | + | C1H3g20459 | CX3g029322 | LOC_Os03g53790 | Os03g0749100 | - | Detail |
| C2H3g10265 | 3:28,274,604-28,278,824 | + | C1H3g09581 | CX3g029115 | LOC_Os03g53800 | Os03g0749300 | - | Detail |
| C2H3g17987 | 3:28,288,970-28,292,865 | + | C1H3g06500 | CX3g027044 | LOC_Os03g53860 | Os03g0749500 | - | Detail |
| C2H3g22149 | 3:28,293,183-28,303,088 | - | C1H3g11162 | CX3g031238 | LOC_Os03g53880 | Os03g0749800 | - | Detail |
| C2H3g15338 | 3:28,303,318-28,304,701 | + | C1H3g23610 | CX3g030383 | LOC_Os03g53890 | Os03g0749900 | - | Detail |
| C2H3g01456 | 3:28,305,411-28,306,170 | - | C1H3g03771 | CX3g029891 | LOC_Os03g53900 | Os03g0750000 | - | Detail |
| C2H3g29736 | 3:28,306,947-28,310,221 | - | C1H3g05432 | - | LOC_Os03g53910 | Os03g0750100 | - | Detail |
| C2H3g18037 | 3:28,317,426-28,325,745 | + | C1H3g04679 | CX3g029217 | LOC_Os03g53920 | Os03g0750300 | - | Detail |
| C2H3g28860 | 3:28,332,020-28,334,497 | - | C1H3g27629 | CX3g026013 | LOC_Os03g53950 | Os03g0750700 | - | Detail |
| C2H3g13208 | 3:28,339,588-28,345,371 | - | C1H3g16169 | CX3g028825 | LOC_Os03g53960 | Os03g0750800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026682 | 3:3,588,933-3,598,699 | - | C1H3g16865 | C2H3g08383 | LOC_Os03g08100 | Os03g0178500 | - | Detail |
| CX3g027590 | 3:3,602,535-3,609,102 | + | C1H3g20528 | C2H3g04420 | LOC_Os03g08140 | Os03g0179000 | OsTTLL12 | Detail |
| CX3g028669 | 3:3,623,873-3,628,735 | + | C1H3g20366 | C2H3g08147 | LOC_Os03g08170 | Os03g0179400 | RLCK103, GUDK, OsRLCK103 | Detail |
| CX3g028526 | 3:3,632,052-3,632,877 | - | C1H3g12127 | C2H3g15441 | LOC_Os03g08200 | Os03g0179700 | - | Detail |
| CX3g028986 | 3:3,636,551-3,642,437 | + | C1H3g24405 | C2H3g12971 | LOC_Os03g08220 | Os03g0179900 | - | Detail |
| CX3g028266 | 3:3,644,480-3,646,399 | - | C1H3g02343 | C2H3g00189 | LOC_Os03g08230 | Os03g0180000 | - | Detail |
| CX3g030311 | 3:3,650,195-3,650,620 | - | C1H3g14063 | C2H3g00572 | LOC_Os03g08250 | Os03g0180100 | - | Detail |
| CX3g029641 | 3:3,655,501-3,660,006 | + | C1H3g29143 | C2H3g21163 | LOC_Os03g08270 | Os03g0180300 | - | Detail |
| CX3g028474 | 3:3,660,736-3,662,970 | - | C1H3g14724 | C2H3g26539 | LOC_Os03g08280 | Os03g0180400 | OsPAA1 | Detail |
| CX3g029186 | 3:3,668,491-3,668,664 | - | - | - | - | - | - | Detail |
| CX3g030332 | 3:3,670,864-3,671,821 | + | C1H3g22681 | C2H3g28919 | LOC_Os03g08290 | Os03g0180600 | - | Detail |
| CX3g025940 | 3:3,672,367-3,676,368 | - | C1H6g25657 | C2H6g19648 | LOC_Os03g08300 | Os03g0180700 | - | Detail |
| CX3g028990 | 3:3,682,059-3,682,595 | - | C1H3g29454 | C2H3g02101 | LOC_Os03g08310 | Os03g0180800 | TIFY11A, OsJAZ3, OsJAZ 9, OsJAZ9, OsTIFY11a, JAZ9 | Detail |
| CX3g028324 | 3:3,686,362-3,687,226 | + | C1H3g20655 | C2H3g09847 | LOC_Os03g08320 | Os03g0180900 | OsJAZ11 | Detail |
| CX3g026192 | 3:3,694,198-3,694,758 | + | C1H3g10433 | C2H3g19227 | LOC_Os03g08330 | Os03g0181100 | - | Detail |
| CX3g025929 | 3:3,704,999-3,706,264 | + | C1H3g18608 | C2H3g22563 | LOC_Os03g08350 | Os03g0181400 | - | Detail |
| CX3g029590 | 3:3,710,971-3,714,518 | + | C1H3g16121 | C2H3g27023 | LOC_Os03g08360 | Os03g0181500 | ONI1, OsCUT4 | Detail |
| CX3g030922 | 3:3,717,437-3,721,152 | + | C1H3g01704 | C2H3g06913 | LOC_Os03g08370 | Os03g0181600 | - | Detail |
| CX3g030111 | 3:3,723,371-3,728,985 | + | C1H3g27694 | C2H3g27575 | LOC_Os03g08380 | Os03g0181750 | - | Detail |
| CX3g028124 | 3:3,733,165-3,735,585 | + | C1H3g16917 | C2H3g19710 | LOC_Os03g08390 | Os03g0181800 | - | Detail |