| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g01047 | 1:129,725-132,219 | + | C1H1g20467 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C2H1g05282 | 1:133,261-138,341 | + | C1H1g21121 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C2H1g27348 | 1:143,367-143,995 | - | C1H1g31375 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C2H1g25360 | 1:144,852-146,855 | - | C1H1g31418 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| C2H1g02276 | 1:150,503-152,335 | + | C1H1g12761 | CX1g002384 | LOC_Os01g01360 | Os01g0103100 | - | Detail |
| C2H1g12532 | 1:154,571-158,924 | - | C1H1g07820 | CX1g006310 | LOC_Os01g01369 | Os01g0103600 | - | Detail |
| C2H1g08358 | 1:160,192-161,694 | + | C1H1g19064 | CX1g002675 | - | Os01g0103700 | - | Detail |
| C2H1g10565 | 1:166,796-169,980 | + | C1H1g29706 | CX1g002638 | LOC_Os01g01390 | Os01g0103800 | - | Detail |
| C2H1g05818 | 1:175,266-179,506 | + | C1H1g17103 | CX1g006100 | LOC_Os01g01400 | Os01g0103900 | - | Detail |
| C2H1g11815 | 1:179,675-182,701 | - | C1H1g12737 | CX1g004046 | LOC_Os01g01410 | Os01g0104000 | - | Detail |
| C2H1g12977 | 1:183,001-187,715 | + | C1H2g23071 | CX1g006059 | LOC_Os01g01420 | Os01g0104100 | - | Detail |
| C2H1g11787 | 1:189,519-190,616 | + | C1H1g14920 | CX1g004345 | LOC_Os01g01430 | Os01g0104200 | OsNAC016 | Detail |
| C2H1g15646 | 1:197,297-201,556 | + | C1H1g01211 | CX1g003727 | LOC_Os01g01450 | Os01g0104400 | - | Detail |
| C2H1g23998 | 1:203,465-203,821 | + | - | CX1g004899 | - | - | - | Detail |
| C2H1g14564 | 1:210,279-211,383 | + | C1H1g10326 | CX1g000326 | LOC_Os01g01470 | Os01g0104500 | OsNAC20 | Detail |
| C2H1g27177 | 1:224,515-228,798 | - | C1H1g16665 | CX1g006184 | LOC_Os01g01484 | Os01g0104600 | - | Detail |
| C2H1g26980 | 1:229,705-232,370 | - | C1H1g16665 | CX1g007181 | LOC_Os01g01484 | Os01g0104600 | - | Detail |
| C2H1g24661 | 1:234,452-241,485 | + | C1H1g14271 | CX1g006176 | LOC_Os01g01510 | Os01g0104800 | - | Detail |
| C2H1g28091 | 1:244,018-248,455 | - | C1H1g14561 | CX1g004009 | LOC_Os01g01520 | Os01g0104900 | - | Detail |
| C2H1g26009 | 1:251,125-255,148 | + | C1H1g25887 | CX1g002864 | LOC_Os01g33040 | Os01g0513900 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026682 | 3:3,588,933-3,598,699 | - | C1H3g16865 | C2H3g08383 | LOC_Os03g08100 | Os03g0178500 | - | Detail |
| CX3g027590 | 3:3,602,535-3,609,102 | + | C1H3g20528 | C2H3g04420 | LOC_Os03g08140 | Os03g0179000 | OsTTLL12 | Detail |
| CX3g028669 | 3:3,623,873-3,628,735 | + | C1H3g20366 | C2H3g08147 | LOC_Os03g08170 | Os03g0179400 | RLCK103, GUDK, OsRLCK103 | Detail |
| CX3g028526 | 3:3,632,052-3,632,877 | - | C1H3g12127 | C2H3g15441 | LOC_Os03g08200 | Os03g0179700 | - | Detail |
| CX3g028986 | 3:3,636,551-3,642,437 | + | C1H3g24405 | C2H3g12971 | LOC_Os03g08220 | Os03g0179900 | - | Detail |
| CX3g028266 | 3:3,644,480-3,646,399 | - | C1H3g02343 | C2H3g00189 | LOC_Os03g08230 | Os03g0180000 | - | Detail |
| CX3g030311 | 3:3,650,195-3,650,620 | - | C1H3g14063 | C2H3g00572 | LOC_Os03g08250 | Os03g0180100 | - | Detail |
| CX3g029641 | 3:3,655,501-3,660,006 | + | C1H3g29143 | C2H3g21163 | LOC_Os03g08270 | Os03g0180300 | - | Detail |
| CX3g028474 | 3:3,660,736-3,662,970 | - | C1H3g14724 | C2H3g26539 | LOC_Os03g08280 | Os03g0180400 | OsPAA1 | Detail |
| CX3g029186 | 3:3,668,491-3,668,664 | - | - | - | - | - | - | Detail |
| CX3g030332 | 3:3,670,864-3,671,821 | + | C1H3g22681 | C2H3g28919 | LOC_Os03g08290 | Os03g0180600 | - | Detail |
| CX3g025940 | 3:3,672,367-3,676,368 | - | C1H6g25657 | C2H6g19648 | LOC_Os03g08300 | Os03g0180700 | - | Detail |
| CX3g028990 | 3:3,682,059-3,682,595 | - | C1H3g29454 | C2H3g02101 | LOC_Os03g08310 | Os03g0180800 | TIFY11A, OsJAZ3, OsJAZ 9, OsJAZ9, OsTIFY11a, JAZ9 | Detail |
| CX3g028324 | 3:3,686,362-3,687,226 | + | C1H3g20655 | C2H3g09847 | LOC_Os03g08320 | Os03g0180900 | OsJAZ11 | Detail |
| CX3g026192 | 3:3,694,198-3,694,758 | + | C1H3g10433 | C2H3g19227 | LOC_Os03g08330 | Os03g0181100 | - | Detail |
| CX3g025929 | 3:3,704,999-3,706,264 | + | C1H3g18608 | C2H3g22563 | LOC_Os03g08350 | Os03g0181400 | - | Detail |
| CX3g029590 | 3:3,710,971-3,714,518 | + | C1H3g16121 | C2H3g27023 | LOC_Os03g08360 | Os03g0181500 | ONI1, OsCUT4 | Detail |
| CX3g030922 | 3:3,717,437-3,721,152 | + | C1H3g01704 | C2H3g06913 | LOC_Os03g08370 | Os03g0181600 | - | Detail |
| CX3g030111 | 3:3,723,371-3,728,985 | + | C1H3g27694 | C2H3g27575 | LOC_Os03g08380 | Os03g0181750 | - | Detail |
| CX3g028124 | 3:3,733,165-3,735,585 | + | C1H3g16917 | C2H3g19710 | LOC_Os03g08390 | Os03g0181800 | - | Detail |