| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g00682 | 4:22,107,214-22,120,572 | - | C2H4g08751 | CX4g032669 | LOC_Os04g42784 | Os04g0507000 | - | Detail |
| C1H4g13723 | 4:22,121,600-22,123,030 | - | C2H4g06679 | CX4g035355 | LOC_Os04g42800 | - | - | Detail |
| C1H4g11839 | 4:22,125,091-22,126,532 | - | C2H4g07568 | CX4g032324 | LOC_Os04g42830 | Os04g0507400 | - | Detail |
| C1H4g04437 | 4:22,128,588-22,130,363 | - | C2H4g22062 | CX4g036634 | LOC_Os04g42830 | Os04g0507400 | - | Detail |
| C1H4g00145 | 4:22,131,655-22,143,064 | - | C2H4g14077 | CX4g034196 | LOC_Os04g42840 | Os04g0507500 | - | Detail |
| C1H4g01460 | 4:22,147,105-22,147,449 | - | C2H4g29137 | - | - | - | - | Detail |
| C1H4g16892 | 4:22,148,297-22,148,728 | - | C2H4g00465 | - | LOC_Os04g42850 | - | - | Detail |
| C1H4g02011 | 4:22,154,340-22,157,959 | + | C2H4g23428 | CX4g033250 | LOC_Os04g42860 | Os04g0507700 | - | Detail |
| C1H4g25437 | 4:22,158,560-22,160,458 | - | C2H4g12434 | CX4g036242 | LOC_Os04g42870 | Os04g0507800 | - | Detail |
| C1H4g05518 | 4:22,160,633-22,166,609 | + | C2H4g04255 | CX4g032853 | LOC_Os04g42880 | Os04g0507900 | - | Detail |
| C1H4g12307 | 4:22,167,762-22,170,801 | - | C2H4g02916 | CX4g033139 | LOC_Os04g42900 | Os04g0508000 | - | Detail |
| C1H4g06876 | 4:22,171,372-22,174,491 | + | C2H4g04232 | CX4g032690 | LOC_Os04g42910 | Os04g0508100 | - | Detail |
| C1H4g08533 | 4:22,175,197-22,180,991 | + | C2H4g05860 | CX4g033875 | LOC_Os04g42920 | Os04g0508200 | - | Detail |
| C1H4g17316 | 4:22,182,309-22,184,898 | + | C2H4g05577 | CX4g035105 | LOC_Os04g42930 | Os04g0508300 | OsGrxC2.2 | Detail |
| C1H4g28976 | 4:22,189,985-22,192,008 | - | C2H4g24307 | CX4g036081 | LOC_Os04g42950 | Os04g0508500 | Os2R_MYB45 | Detail |
| C1H4g09744 | 4:22,205,334-22,209,302 | - | C2H4g15606 | CX4g031554 | LOC_Os04g42980 | Os04g0508800 | - | Detail |
| C1H4g09860 | 4:22,214,007-22,219,452 | - | C2H4g18756 | CX4g035042 | LOC_Os04g42990 | Os04g0508900 | - | Detail |
| C1H4g03726 | 4:22,227,610-22,233,055 | + | C2H4g21092 | CX4g031481 | LOC_Os04g43020 | Os04g0509000 | - | Detail |
| C1H4g25656 | 4:22,233,880-22,241,374 | + | C2H4g17989 | CX4g035238 | LOC_Os04g43030 | Os04g0509100 | - | Detail |
| C1H4g05629 | 4:22,242,708-22,244,741 | - | C2H4g25209 | CX4g036052 | LOC_Os04g43040 | Os04g0509200 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026682 | 3:3,588,933-3,598,699 | - | C1H3g16865 | C2H3g08383 | LOC_Os03g08100 | Os03g0178500 | - | Detail |
| CX3g027590 | 3:3,602,535-3,609,102 | + | C1H3g20528 | C2H3g04420 | LOC_Os03g08140 | Os03g0179000 | OsTTLL12 | Detail |
| CX3g028669 | 3:3,623,873-3,628,735 | + | C1H3g20366 | C2H3g08147 | LOC_Os03g08170 | Os03g0179400 | RLCK103, GUDK, OsRLCK103 | Detail |
| CX3g028526 | 3:3,632,052-3,632,877 | - | C1H3g12127 | C2H3g15441 | LOC_Os03g08200 | Os03g0179700 | - | Detail |
| CX3g028986 | 3:3,636,551-3,642,437 | + | C1H3g24405 | C2H3g12971 | LOC_Os03g08220 | Os03g0179900 | - | Detail |
| CX3g028266 | 3:3,644,480-3,646,399 | - | C1H3g02343 | C2H3g00189 | LOC_Os03g08230 | Os03g0180000 | - | Detail |
| CX3g030311 | 3:3,650,195-3,650,620 | - | C1H3g14063 | C2H3g00572 | LOC_Os03g08250 | Os03g0180100 | - | Detail |
| CX3g029641 | 3:3,655,501-3,660,006 | + | C1H3g29143 | C2H3g21163 | LOC_Os03g08270 | Os03g0180300 | - | Detail |
| CX3g028474 | 3:3,660,736-3,662,970 | - | C1H3g14724 | C2H3g26539 | LOC_Os03g08280 | Os03g0180400 | OsPAA1 | Detail |
| CX3g029186 | 3:3,668,491-3,668,664 | - | - | - | - | - | - | Detail |
| CX3g030332 | 3:3,670,864-3,671,821 | + | C1H3g22681 | C2H3g28919 | LOC_Os03g08290 | Os03g0180600 | - | Detail |
| CX3g025940 | 3:3,672,367-3,676,368 | - | C1H6g25657 | C2H6g19648 | LOC_Os03g08300 | Os03g0180700 | - | Detail |
| CX3g028990 | 3:3,682,059-3,682,595 | - | C1H3g29454 | C2H3g02101 | LOC_Os03g08310 | Os03g0180800 | TIFY11A, OsJAZ3, OsJAZ 9, OsJAZ9, OsTIFY11a, JAZ9 | Detail |
| CX3g028324 | 3:3,686,362-3,687,226 | + | C1H3g20655 | C2H3g09847 | LOC_Os03g08320 | Os03g0180900 | OsJAZ11 | Detail |
| CX3g026192 | 3:3,694,198-3,694,758 | + | C1H3g10433 | C2H3g19227 | LOC_Os03g08330 | Os03g0181100 | - | Detail |
| CX3g025929 | 3:3,704,999-3,706,264 | + | C1H3g18608 | C2H3g22563 | LOC_Os03g08350 | Os03g0181400 | - | Detail |
| CX3g029590 | 3:3,710,971-3,714,518 | + | C1H3g16121 | C2H3g27023 | LOC_Os03g08360 | Os03g0181500 | ONI1, OsCUT4 | Detail |
| CX3g030922 | 3:3,717,437-3,721,152 | + | C1H3g01704 | C2H3g06913 | LOC_Os03g08370 | Os03g0181600 | - | Detail |
| CX3g030111 | 3:3,723,371-3,728,985 | + | C1H3g27694 | C2H3g27575 | LOC_Os03g08380 | Os03g0181750 | - | Detail |
| CX3g028124 | 3:3,733,165-3,735,585 | + | C1H3g16917 | C2H3g19710 | LOC_Os03g08390 | Os03g0181800 | - | Detail |