| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g22886 | 3:31,434,143-31,437,194 | + | C2H3g27858 | CX3g027239 | LOC_Os03g59170 | Os03g0806500 | - | Detail |
| C1H3g27480 | 3:31,438,246-31,439,316 | + | C2H3g13367 | CX3g026016 | LOC_Os03g59180 | Os03g0806600 | - | Detail |
| C1H3g02437 | 3:31,448,668-31,454,555 | + | - | CX3g028300 | LOC_Os03g59200 | Os03g0806700 | - | Detail |
| C1H3g13375 | 3:31,454,835-31,456,599 | + | C2H3g21807 | CX3g026400 | LOC_Os03g59220 | Os03g0806900 | - | Detail |
| C1H3g26885 | 3:31,466,748-31,470,616 | + | C2H3g14008 | CX3g026921 | LOC_Os03g59240 | Os03g0807100 | - | Detail |
| C1H3g11037 | 3:31,471,922-31,473,936 | - | C2H3g07423 | CX3g028660 | LOC_Os03g59250 | Os03g0807200 | OsDUF1639.1 | Detail |
| C1H3g25570 | 3:31,477,433-31,480,659 | - | C2H3g00577 | CX3g025343 | LOC_Os03g59264 | Os03g0832200 | - | Detail |
| C1H3g16706 | 3:31,480,663-31,483,242 | - | C2H3g14894 | CX3g025343 | LOC_Os03g59264 | Os03g0807400 | - | Detail |
| C1H3g08998 | 3:31,485,698-31,485,895 | + | C2H3g04449 | CX3g027491 | LOC_Os03g59280 | Os03g0807500 | - | Detail |
| C1H3g24691 | 3:31,486,281-31,488,433 | + | - | - | - | - | - | Detail |
| C1H3g08149 | 3:31,489,020-31,492,436 | - | C2H3g23454 | CX3g030187 | LOC_Os03g59290 | Os03g0807600 | - | Detail |
| C1H3g21319 | 3:31,499,552-31,501,687 | + | C2H3g28073 | CX3g028893 | LOC_Os03g59300 | Os03g0807700 | - | Detail |
| C1H3g20626 | 3:31,503,129-31,504,746 | + | C2H3g16190 | CX3g030569 | LOC_Os03g59310 | Os03g0807800 | - | Detail |
| C1H3g05345 | 3:31,506,035-31,507,229 | + | C2H3g13799 | CX3g030704 | LOC_Os03g59320 | Os03g0807900 | - | Detail |
| C1H3g05454 | 3:31,511,254-31,513,879 | + | C2H3g07099 | CX3g029953 | LOC_Os03g59330 | Os03g0808000 | - | Detail |
| C1H3g31749 | 3:31,514,042-31,519,934 | - | C2H3g27778 | CX3g029274 | LOC_Os03g59340 | Os03g0808100 | - | Detail |
| C1H3g13091 | 3:31,526,547-31,528,421 | - | C2H3g01836 | CX3g028432 | LOC_Os03g59360 | Os03g0808300 | - | Detail |
| C1H3g25091 | 3:31,532,185-31,532,907 | - | C2H3g03811 | CX3g025805 | LOC_Os03g59370 | Os03g0808400 | - | Detail |
| C1H3g20305 | 3:31,552,820-31,557,016 | + | C2H3g04526 | CX3g024996 | LOC_Os03g59390 | Os03g0808600 | OsCPK8 | Detail |
| C1H3g10123 | 3:31,565,313-31,570,030 | + | C2H3g07709 | CX3g029969 | LOC_Os03g59430 | Os03g0808900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026682 | 3:3,588,933-3,598,699 | - | C1H3g16865 | C2H3g08383 | LOC_Os03g08100 | Os03g0178500 | - | Detail |
| CX3g027590 | 3:3,602,535-3,609,102 | + | C1H3g20528 | C2H3g04420 | LOC_Os03g08140 | Os03g0179000 | OsTTLL12 | Detail |
| CX3g028669 | 3:3,623,873-3,628,735 | + | C1H3g20366 | C2H3g08147 | LOC_Os03g08170 | Os03g0179400 | RLCK103, GUDK, OsRLCK103 | Detail |
| CX3g028526 | 3:3,632,052-3,632,877 | - | C1H3g12127 | C2H3g15441 | LOC_Os03g08200 | Os03g0179700 | - | Detail |
| CX3g028986 | 3:3,636,551-3,642,437 | + | C1H3g24405 | C2H3g12971 | LOC_Os03g08220 | Os03g0179900 | - | Detail |
| CX3g028266 | 3:3,644,480-3,646,399 | - | C1H3g02343 | C2H3g00189 | LOC_Os03g08230 | Os03g0180000 | - | Detail |
| CX3g030311 | 3:3,650,195-3,650,620 | - | C1H3g14063 | C2H3g00572 | LOC_Os03g08250 | Os03g0180100 | - | Detail |
| CX3g029641 | 3:3,655,501-3,660,006 | + | C1H3g29143 | C2H3g21163 | LOC_Os03g08270 | Os03g0180300 | - | Detail |
| CX3g028474 | 3:3,660,736-3,662,970 | - | C1H3g14724 | C2H3g26539 | LOC_Os03g08280 | Os03g0180400 | OsPAA1 | Detail |
| CX3g029186 | 3:3,668,491-3,668,664 | - | - | - | - | - | - | Detail |
| CX3g030332 | 3:3,670,864-3,671,821 | + | C1H3g22681 | C2H3g28919 | LOC_Os03g08290 | Os03g0180600 | - | Detail |
| CX3g025940 | 3:3,672,367-3,676,368 | - | C1H6g25657 | C2H6g19648 | LOC_Os03g08300 | Os03g0180700 | - | Detail |
| CX3g028990 | 3:3,682,059-3,682,595 | - | C1H3g29454 | C2H3g02101 | LOC_Os03g08310 | Os03g0180800 | TIFY11A, OsJAZ3, OsJAZ 9, OsJAZ9, OsTIFY11a, JAZ9 | Detail |
| CX3g028324 | 3:3,686,362-3,687,226 | + | C1H3g20655 | C2H3g09847 | LOC_Os03g08320 | Os03g0180900 | OsJAZ11 | Detail |
| CX3g026192 | 3:3,694,198-3,694,758 | + | C1H3g10433 | C2H3g19227 | LOC_Os03g08330 | Os03g0181100 | - | Detail |
| CX3g025929 | 3:3,704,999-3,706,264 | + | C1H3g18608 | C2H3g22563 | LOC_Os03g08350 | Os03g0181400 | - | Detail |
| CX3g029590 | 3:3,710,971-3,714,518 | + | C1H3g16121 | C2H3g27023 | LOC_Os03g08360 | Os03g0181500 | ONI1, OsCUT4 | Detail |
| CX3g030922 | 3:3,717,437-3,721,152 | + | C1H3g01704 | C2H3g06913 | LOC_Os03g08370 | Os03g0181600 | - | Detail |
| CX3g030111 | 3:3,723,371-3,728,985 | + | C1H3g27694 | C2H3g27575 | LOC_Os03g08380 | Os03g0181750 | - | Detail |
| CX3g028124 | 3:3,733,165-3,735,585 | + | C1H3g16917 | C2H3g19710 | LOC_Os03g08390 | Os03g0181800 | - | Detail |