| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H3g07282 | 3:574,198-584,935 | + | C2H3g29148 | CX3g026996 | LOC_Os03g02150 | Os03g0112400 | - | Detail |
| C1H3g30522 | 3:587,557-596,061 | + | C2H3g00838 | CX3g029929 | - | Os03g0112600 | - | Detail |
| C1H3g07238 | 3:596,809-601,046 | - | C2H3g27881 | CX3g030050 | LOC_Os03g02170 | Os03g0112800 | STS1 | Detail |
| C1H3g09620 | 3:601,445-603,290 | - | C2H3g26177 | CX3g030634 | LOC_Os03g02180 | Os03g0112900 | OsF5HL2 | Detail |
| C1H3g14295 | 3:610,281-611,956 | - | C2H3g13014 | CX3g025559 | LOC_Os03g02190 | Os03g0113000 | - | Detail |
| C1H3g06676 | 3:614,429-617,303 | + | C2H3g22975 | CX3g028290 | LOC_Os03g02200 | Os03g0113100 | - | Detail |
| C1H3g29988 | 3:618,376-619,848 | + | C2H3g07317 | CX3g026697 | LOC_Os03g02210 | Os03g0113200 | - | Detail |
| C1H3g08654 | 3:629,791-634,090 | - | C2H3g26703 | CX3g028541 | LOC_Os03g02240 | - | - | Detail |
| C1H3g00977 | 3:645,006-649,443 | - | C2H3g21122 | CX3g027292 | LOC_Os03g02260 | Os03g0113700 | - | Detail |
| C1H3g24927 | 3:649,637-655,210 | + | C2H3g16661 | CX3g030810 | LOC_Os03g02270 | Os03g0113800 | - | Detail |
| C1H3g15339 | 3:660,395-660,991 | + | C2H3g07262 | CX3g028218 | LOC_Os03g02280 | Os03g0113900 | OsS40-4 | Detail |
| C1H3g18554 | 3:664,487-670,876 | + | C2H3g09613 | CX3g027517 | LOC_Os03g02290 | Os03g0114000 | - | Detail |
| C1H3g18461 | 3:671,956-672,681 | + | C2H3g23619 | CX3g025737 | LOC_Os03g02300 | Os03g0114100 | - | Detail |
| C1H3g30974 | 3:673,964-675,534 | - | C2H3g25616 | CX3g030259 | LOC_Os03g02310 | Os03g0114200 | - | Detail |
| C1H3g18565 | 3:677,609-689,264 | + | C2H3g01746 | CX3g028339 | LOC_Os03g02320 | Os03g0114300 | - | Detail |
| C1H3g10649 | 3:689,718-691,277 | - | C2H3g18646 | CX3g029614 | LOC_Os03g02330 | Os03g0114400 | - | Detail |
| C1H3g05637 | 3:698,359-700,398 | - | C2H3g22127 | CX3g028514 | LOC_Os03g08400 | Os03g0429900 | - | Detail |
| C1H3g22597 | 3:723,138-727,150 | + | C2H3g04046 | CX3g027583 | LOC_Os03g02380 | Os03g0114800 | - | Detail |
| C1H3g14435 | 3:729,182-729,766 | - | C2H3g22633 | CX3g025748 | LOC_Os03g02390 | Os03g0114900 | - | Detail |
| C1H3g27376 | 3:731,287-731,631 | + | C2H3g26464 | CX3g030673 | LOC_Os03g02400 | Os03g0115000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026682 | 3:3,588,933-3,598,699 | - | C1H3g16865 | C2H3g08383 | LOC_Os03g08100 | Os03g0178500 | - | Detail |
| CX3g027590 | 3:3,602,535-3,609,102 | + | C1H3g20528 | C2H3g04420 | LOC_Os03g08140 | Os03g0179000 | OsTTLL12 | Detail |
| CX3g028669 | 3:3,623,873-3,628,735 | + | C1H3g20366 | C2H3g08147 | LOC_Os03g08170 | Os03g0179400 | RLCK103, GUDK, OsRLCK103 | Detail |
| CX3g028526 | 3:3,632,052-3,632,877 | - | C1H3g12127 | C2H3g15441 | LOC_Os03g08200 | Os03g0179700 | - | Detail |
| CX3g028986 | 3:3,636,551-3,642,437 | + | C1H3g24405 | C2H3g12971 | LOC_Os03g08220 | Os03g0179900 | - | Detail |
| CX3g028266 | 3:3,644,480-3,646,399 | - | C1H3g02343 | C2H3g00189 | LOC_Os03g08230 | Os03g0180000 | - | Detail |
| CX3g030311 | 3:3,650,195-3,650,620 | - | C1H3g14063 | C2H3g00572 | LOC_Os03g08250 | Os03g0180100 | - | Detail |
| CX3g029641 | 3:3,655,501-3,660,006 | + | C1H3g29143 | C2H3g21163 | LOC_Os03g08270 | Os03g0180300 | - | Detail |
| CX3g028474 | 3:3,660,736-3,662,970 | - | C1H3g14724 | C2H3g26539 | LOC_Os03g08280 | Os03g0180400 | OsPAA1 | Detail |
| CX3g029186 | 3:3,668,491-3,668,664 | - | - | - | - | - | - | Detail |
| CX3g030332 | 3:3,670,864-3,671,821 | + | C1H3g22681 | C2H3g28919 | LOC_Os03g08290 | Os03g0180600 | - | Detail |
| CX3g025940 | 3:3,672,367-3,676,368 | - | C1H6g25657 | C2H6g19648 | LOC_Os03g08300 | Os03g0180700 | - | Detail |
| CX3g028990 | 3:3,682,059-3,682,595 | - | C1H3g29454 | C2H3g02101 | LOC_Os03g08310 | Os03g0180800 | TIFY11A, OsJAZ3, OsJAZ 9, OsJAZ9, OsTIFY11a, JAZ9 | Detail |
| CX3g028324 | 3:3,686,362-3,687,226 | + | C1H3g20655 | C2H3g09847 | LOC_Os03g08320 | Os03g0180900 | OsJAZ11 | Detail |
| CX3g026192 | 3:3,694,198-3,694,758 | + | C1H3g10433 | C2H3g19227 | LOC_Os03g08330 | Os03g0181100 | - | Detail |
| CX3g025929 | 3:3,704,999-3,706,264 | + | C1H3g18608 | C2H3g22563 | LOC_Os03g08350 | Os03g0181400 | - | Detail |
| CX3g029590 | 3:3,710,971-3,714,518 | + | C1H3g16121 | C2H3g27023 | LOC_Os03g08360 | Os03g0181500 | ONI1, OsCUT4 | Detail |
| CX3g030922 | 3:3,717,437-3,721,152 | + | C1H3g01704 | C2H3g06913 | LOC_Os03g08370 | Os03g0181600 | - | Detail |
| CX3g030111 | 3:3,723,371-3,728,985 | + | C1H3g27694 | C2H3g27575 | LOC_Os03g08380 | Os03g0181750 | - | Detail |
| CX3g028124 | 3:3,733,165-3,735,585 | + | C1H3g16917 | C2H3g19710 | LOC_Os03g08390 | Os03g0181800 | - | Detail |