| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g30841 | 2:25,332,907-25,337,732 | - | C2H2g29807 | CX2g020078 | LOC_Os02g45090 | Os02g0672400 | - | Detail |
| C1H2g09721 | 2:25,341,076-25,344,998 | + | C2H2g23823 | CX2g022558 | LOC_Os02g45110 | Os02g0672600 | OsMTA2 | Detail |
| C1H2g17265 | 2:25,347,647-25,347,853 | + | C2H2g27864 | CX2g020462 | - | Os02g0672700 | - | Detail |
| C1H2g06794 | 2:25,349,614-25,354,227 | - | C2H2g19722 | CX2g020387 | LOC_Os02g45130 | Os02g0672800 | - | Detail |
| C1H2g28086 | 2:25,362,832-25,363,543 | + | C2H2g29141 | CX2g019881 | LOC_Os02g45160 | Os02g0673100 | - | Detail |
| C1H2g27166 | 2:25,366,937-25,369,279 | - | C2H2g27637 | CX2g020832 | LOC_Os02g45160 | Os02g0673100 | - | Detail |
| C1H2g11887 | 2:25,393,683-25,398,977 | + | C2H2g10348 | CX2g024161 | LOC_Os02g45170 | Os02g0673500 | OsLHW | Detail |
| C1H2g28162 | 2:25,401,753-25,406,175 | + | C2H2g28406 | CX2g021906 | LOC_Os02g45180 | Os02g0673600 | - | Detail |
| C1H2g16674 | 2:25,415,052-25,417,241 | - | C2H2g24261 | CX2g022483 | LOC_Os02g45200 | Os02g0673700 | - | Detail |
| C1H2g05896 | 2:25,448,292-25,452,649 | - | C2H2g23214 | CX2g023908 | LOC_Os02g45240 | Os02g0674700 | - | Detail |
| C1H2g12604 | 2:25,456,007-25,463,000 | - | C2H2g16050 | CX2g020562 | LOC_Os02g45250 | Os02g0674800 | Roc5 | Detail |
| C1H2g01193 | 2:25,470,731-25,471,202 | - | C2H2g05987 | CX2g019919 | - | - | - | Detail |
| C1H2g22262 | 2:25,472,584-25,476,413 | - | C2H2g12523 | CX2g019242 | LOC_Os02g45280 | Os02g0675400 | - | Detail |
| C1H2g25338 | 2:25,493,668-25,497,504 | - | C2H2g11582 | CX2g019003 | LOC_Os02g45310 | Os02g0675700 | - | Detail |
| C1H2g01857 | 2:25,511,469-25,514,373 | + | C2H2g05906 | CX2g019886 | LOC_Os02g45320 | Os02g0675800 | - | Detail |
| C1H2g28776 | 2:25,525,571-25,533,418 | + | C2H2g02666 | CX2g020935 | LOC_Os02g45344 | Os02g0676000 | - | Detail |
| C1H2g12382 | 2:25,548,133-25,548,555 | + | C2H2g27821 | - | - | - | - | Detail |
| C1H2g30126 | 2:25,554,247-25,557,975 | + | C2H2g20409 | CX2g021678 | LOC_Os02g45390 | Os02g0676500 | - | Detail |
| C1H2g18536 | 2:25,568,799-25,569,584 | + | C2H2g15785 | CX2g019396 | LOC_Os02g45420 | Os02g0676800 | - | Detail |
| C1H2g13248 | 2:25,600,859-25,601,796 | - | C2H2g14222 | CX2g023525 | LOC_Os02g45460 | Os02g0677600 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g026682 | 3:3,588,933-3,598,699 | - | C1H3g16865 | C2H3g08383 | LOC_Os03g08100 | Os03g0178500 | - | Detail |
| CX3g027590 | 3:3,602,535-3,609,102 | + | C1H3g20528 | C2H3g04420 | LOC_Os03g08140 | Os03g0179000 | OsTTLL12 | Detail |
| CX3g028669 | 3:3,623,873-3,628,735 | + | C1H3g20366 | C2H3g08147 | LOC_Os03g08170 | Os03g0179400 | RLCK103, GUDK, OsRLCK103 | Detail |
| CX3g028526 | 3:3,632,052-3,632,877 | - | C1H3g12127 | C2H3g15441 | LOC_Os03g08200 | Os03g0179700 | - | Detail |
| CX3g028986 | 3:3,636,551-3,642,437 | + | C1H3g24405 | C2H3g12971 | LOC_Os03g08220 | Os03g0179900 | - | Detail |
| CX3g028266 | 3:3,644,480-3,646,399 | - | C1H3g02343 | C2H3g00189 | LOC_Os03g08230 | Os03g0180000 | - | Detail |
| CX3g030311 | 3:3,650,195-3,650,620 | - | C1H3g14063 | C2H3g00572 | LOC_Os03g08250 | Os03g0180100 | - | Detail |
| CX3g029641 | 3:3,655,501-3,660,006 | + | C1H3g29143 | C2H3g21163 | LOC_Os03g08270 | Os03g0180300 | - | Detail |
| CX3g028474 | 3:3,660,736-3,662,970 | - | C1H3g14724 | C2H3g26539 | LOC_Os03g08280 | Os03g0180400 | OsPAA1 | Detail |
| CX3g029186 | 3:3,668,491-3,668,664 | - | - | - | - | - | - | Detail |
| CX3g030332 | 3:3,670,864-3,671,821 | + | C1H3g22681 | C2H3g28919 | LOC_Os03g08290 | Os03g0180600 | - | Detail |
| CX3g025940 | 3:3,672,367-3,676,368 | - | C1H6g25657 | C2H6g19648 | LOC_Os03g08300 | Os03g0180700 | - | Detail |
| CX3g028990 | 3:3,682,059-3,682,595 | - | C1H3g29454 | C2H3g02101 | LOC_Os03g08310 | Os03g0180800 | TIFY11A, OsJAZ3, OsJAZ 9, OsJAZ9, OsTIFY11a, JAZ9 | Detail |
| CX3g028324 | 3:3,686,362-3,687,226 | + | C1H3g20655 | C2H3g09847 | LOC_Os03g08320 | Os03g0180900 | OsJAZ11 | Detail |
| CX3g026192 | 3:3,694,198-3,694,758 | + | C1H3g10433 | C2H3g19227 | LOC_Os03g08330 | Os03g0181100 | - | Detail |
| CX3g025929 | 3:3,704,999-3,706,264 | + | C1H3g18608 | C2H3g22563 | LOC_Os03g08350 | Os03g0181400 | - | Detail |
| CX3g029590 | 3:3,710,971-3,714,518 | + | C1H3g16121 | C2H3g27023 | LOC_Os03g08360 | Os03g0181500 | ONI1, OsCUT4 | Detail |
| CX3g030922 | 3:3,717,437-3,721,152 | + | C1H3g01704 | C2H3g06913 | LOC_Os03g08370 | Os03g0181600 | - | Detail |
| CX3g030111 | 3:3,723,371-3,728,985 | + | C1H3g27694 | C2H3g27575 | LOC_Os03g08380 | Os03g0181750 | - | Detail |
| CX3g028124 | 3:3,733,165-3,735,585 | + | C1H3g16917 | C2H3g19710 | LOC_Os03g08390 | Os03g0181800 | - | Detail |