| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g11863 | 11:19,117,603-19,121,425 | + | C1H11g01914 | CX11g011357 | LOC_Os11g36440 | Os11g0572700 | OsCRTISO, MHZ5, MHZ5/CRTISO, CRTISO | Detail |
| C2H11g13422 | 11:19,125,558-19,127,963 | - | C1H11g18936 | CX11g011222 | LOC_Os11g36450 | Os11g0572800 | JMJ710 | Detail |
| C2H11g26770 | 11:19,130,769-19,137,484 | - | C1H11g19358 | CX11g010869 | LOC_Os11g36880 | - | - | Detail |
| C2H11g29389 | 11:19,138,250-19,142,658 | - | C1H11g13497 | CX11g010869 | LOC_Os11g36890 | Os11g0577350 | - | Detail |
| C2H11g06789 | 11:19,147,613-19,163,472 | - | C1H11g26977 | CX11g013093 | LOC_Os11g36470 | Os11g0573000 | - | Detail |
| C2H11g21322 | 11:19,169,026-19,172,428 | + | C1H11g26926 | CX11g011761 | LOC_Os11g36480 | Os11g0573200 | - | Detail |
| C2H11g10839 | 11:19,197,783-19,200,808 | + | C1H11g24728 | CX11g011586 | LOC_Os11g36740 | Os11g0575900 | - | Detail |
| C2H11g22993 | 11:19,213,454-19,215,976 | + | - | CX11g013980 | LOC_Os11g36760 | Os11g0576100 | - | Detail |
| C2H11g27642 | 11:19,236,348-19,238,024 | + | C1H11g28846 | CX11g010880 | LOC_Os11g36790 | Os11g0576400 | - | Detail |
| C2H11g01112 | 11:19,245,667-19,251,021 | + | C1H11g25490 | CX11g011986 | LOC_Os11g36930 | Os11g0577700 | - | Detail |
| C2H11g02749 | 11:19,252,164-19,253,651 | + | C1H11g20417 | CX11g012965 | LOC_Os11g36940 | Os11g0577800 | - | Detail |
| C2H11g17082 | 11:19,254,574-19,258,082 | + | C1H11g23616 | CX11g014373 | LOC_Os11g36950 | - | - | Detail |
| C2H11g11502 | 11:19,259,245-19,259,987 | + | - | - | - | - | - | Detail |
| C2H11g22955 | 11:19,266,832-19,269,990 | + | C1H11g07221 | CX11g012558 | LOC_Os11g36960 | Os11g0578100 | - | Detail |
| C2H11g13105 | 11:19,281,747-19,284,724 | + | C1H11g04768 | CX11g012558 | LOC_Os11g36960 | Os11g0578225 | - | Detail |
| C2H11g08275 | 11:19,292,554-19,297,955 | + | C1H11g25485 | CX11g012558 | LOC_Os11g36560 | Os11g0578225 | - | Detail |
| C2H11g04234 | 11:19,303,003-19,303,613 | + | C1H11g25485 | CX11g012558 | LOC_Os11g36960 | Os11g0578250 | - | Detail |
| C2H11g04331 | 11:19,318,934-19,323,956 | + | C1H11g28830 | CX11g012546 | LOC_Os11g36520 | Os11g0578500 | - | Detail |
| C2H11g16636 | 11:19,328,125-19,329,357 | + | C1H11g25206 | CX11g012020 | LOC_Os11g37010 | Os11g0578700 | - | Detail |
| C2H11g25259 | 11:19,345,087-19,349,361 | + | C1H11g10451 | CX11g012003 | LOC_Os11g37050 | Os11g0579200 | ctp-1 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030931 | 3:3,470,322-3,473,263 | - | C1H3g05067 | C2H3g01619 | LOC_Os03g07880 | Os03g0174900 | OsNF-YA1, HAP2C | Detail |
| CX3g031308 | 3:3,482,034-3,483,026 | + | C1H3g04156 | C2H3g14257 | LOC_Os03g07890 | Os03g0175200 | - | Detail |
| CX3g030291 | 3:3,488,780-3,489,103 | + | C1H3g18648 | C2H3g21508 | - | - | - | Detail |
| CX3g025046 | 3:3,489,997-3,494,015 | + | C1H3g26233 | C2H3g07896 | LOC_Os03g07910 | Os03g0175600 | - | Detail |
| CX3g027383 | 3:3,503,101-3,504,039 | - | C1H3g08447 | C2H3g28877 | LOC_Os03g07920 | Os03g0175800 | BG1 | Detail |
| CX3g031114 | 3:3,513,357-3,514,815 | + | C1H3g27866 | C2H3g25222 | LOC_Os03g07930 | Os03g0176100 | - | Detail |
| CX3g025943 | 3:3,516,733-3,520,526 | - | C1H3g31714 | C2H3g07082 | LOC_Os03g07940 | Os03g0176300 | - | Detail |
| CX3g029598 | 3:3,524,664-3,525,152 | + | C1H3g29070 | C2H3g25173 | LOC_Os03g07950 | Os03g0176500 | - | Detail |
| CX3g030266 | 3:3,528,832-3,531,298 | - | C1H3g15283 | C2H3g21895 | LOC_Os03g07960 | Os03g0176700 | - | Detail |
| CX3g029368 | 3:3,532,794-3,536,588 | - | C1H3g23456 | C2H3g00013 | LOC_Os03g07970 | Os03g0176800 | - | Detail |
| CX3g028066 | 3:3,538,243-3,538,563 | - | C1H3g29339 | C2H3g04928 | LOC_Os03g07980 | Os03g0176900 | - | Detail |
| CX3g029737 | 3:3,540,593-3,543,674 | + | C1H3g11831 | C2H3g13522 | LOC_Os03g07990 | Os03g0177000 | - | Detail |
| CX3g030435 | 3:3,544,980-3,548,014 | + | C1H3g26527 | C2H3g03958 | LOC_Os03g08000 | Os03g0177300 | - | Detail |
| CX3g028878 | 3:3,550,061-3,552,111 | + | C1H3g02996 | C2H3g10879 | LOC_Os03g08010 | Os03g0178000 | - | Detail |
| CX3g026443 | 3:3,555,593-3,557,641 | + | C1H3g16670 | C2H3g01446 | LOC_Os03g08020 | Os03g0177500 | OsEF1A | Detail |
| CX3g028070 | 3:3,566,146-3,568,101 | + | C1H3g02996 | C2H3g29734 | LOC_Os03g08020 | Os03g0178000 | - | Detail |
| CX3g025284 | 3:3,572,273-3,574,208 | + | C1H3g16670 | C2H3g10879 | LOC_Os03g08050 | Os03g0177400 | - | Detail |
| CX3g028367 | 3:3,575,019-3,581,584 | - | C1H3g20350 | C2H3g00449 | LOC_Os03g08070 | Os03g0178100 | - | Detail |
| CX3g027428 | 3:3,584,764-3,586,143 | + | C1H3g15649 | C2H3g25180 | LOC_Os03g08080 | Os03g0178200 | - | Detail |
| CX3g029291 | 3:3,586,662-3,587,877 | - | C1H3g27650 | C2H3g26133 | LOC_Os03g08090 | Os03g0178300 | - | Detail |