| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g26745 | 9:17,426,590-17,428,151 | + | C1H9g13766 | CX9g055830 | LOC_Os09g35830 | Os09g0527100 | - | Detail |
| C2H9g10324 | 9:17,436,093-17,439,429 | + | C1H9g13766 | CX9g055265 | LOC_Os09g35850 | Os09g0527500 | - | Detail |
| C2H9g01691 | 9:17,443,794-17,445,384 | + | C1H9g07362 | CX9g055927 | LOC_Os09g35860 | Os09g0527600 | - | Detail |
| C2H9g08969 | 9:17,448,493-17,449,274 | - | C1H9g25049 | CX9g056672 | LOC_Os09g35870 | Os09g0527700 | - | Detail |
| C2H9g07509 | 9:17,453,053-17,456,008 | - | C1H9g07553 | CX9g055267 | LOC_Os09g35880 | Os09g0527900 | - | Detail |
| C2H9g28114 | 9:17,461,813-17,465,864 | + | C1H9g01949 | CX9g055134 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| C2H9g04300 | 9:17,477,350-17,478,193 | + | C1H9g05805 | CX9g055268 | LOC_Os09g35910 | Os09g0528200 | - | Detail |
| C2H9g16123 | 9:17,481,815-17,484,032 | - | C1H9g07637 | CX9g055503 | LOC_Os09g35920 | Os09g0528300 | - | Detail |
| C2H9g26896 | 9:17,495,146-17,497,057 | + | C1H9g29475 | CX9g055183 | LOC_Os09g35940 | Os09g0528700 | - | Detail |
| C2H9g28773 | 9:17,523,780-17,528,824 | - | C1H9g30526 | CX9g055032 | LOC_Os09g35960 | Os09g0528800 | - | Detail |
| C2H9g02120 | 9:17,532,544-17,535,528 | - | C1H9g28769 | CX9g056476 | LOC_Os09g35970 | Os09g0529100 | - | Detail |
| C2H9g25877 | 9:17,538,389-17,546,069 | - | C1H9g03629 | CX9g055769 | LOC_Os09g35980 | Os09g0529300 | SPK, Spk(t), Spk, OsTAC1, TAC1, qTAC9 | Detail |
| C2H9g23489 | 9:17,546,316-17,549,213 | - | C1H9g19525 | CX9g056579 | LOC_Os09g36000 | Os09g0529400 | - | Detail |
| C2H9g27445 | 9:17,549,627-17,553,215 | - | C1H9g27128 | CX9g056877 | LOC_Os09g36020 | Os09g0529700 | OsVPS22 | Detail |
| C2H9g23825 | 9:17,555,063-17,558,905 | + | C1H9g05809 | CX9g055906 | LOC_Os09g36040 | Os09g0530000 | - | Detail |
| C2H9g28583 | 9:17,566,927-17,570,294 | + | C1H9g07466 | CX9g056800 | LOC_Os09g36060 | Os09g0530200 | - | Detail |
| C2H9g03363 | 9:17,570,757-17,573,848 | + | C1H9g12433 | CX9g057922 | LOC_Os09g36070 | Os09g0530275 | - | Detail |
| C2H9g23341 | 9:17,581,105-17,582,729 | + | C1H9g17904 | CX9g056469 | LOC_Os09g36080 | Os09g0530300 | - | Detail |
| C2H9g22638 | 9:17,584,226-17,593,186 | + | C1H9g17327 | CX9g057701 | LOC_Os09g36090 | Os09g0530500 | - | Detail |
| C2H9g01014 | 9:17,593,927-17,596,071 | + | C1H9g09404 | CX9g055918 | LOC_Os09g36100 | Os09g0530700 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030931 | 3:3,470,322-3,473,263 | - | C1H3g05067 | C2H3g01619 | LOC_Os03g07880 | Os03g0174900 | OsNF-YA1, HAP2C | Detail |
| CX3g031308 | 3:3,482,034-3,483,026 | + | C1H3g04156 | C2H3g14257 | LOC_Os03g07890 | Os03g0175200 | - | Detail |
| CX3g030291 | 3:3,488,780-3,489,103 | + | C1H3g18648 | C2H3g21508 | - | - | - | Detail |
| CX3g025046 | 3:3,489,997-3,494,015 | + | C1H3g26233 | C2H3g07896 | LOC_Os03g07910 | Os03g0175600 | - | Detail |
| CX3g027383 | 3:3,503,101-3,504,039 | - | C1H3g08447 | C2H3g28877 | LOC_Os03g07920 | Os03g0175800 | BG1 | Detail |
| CX3g031114 | 3:3,513,357-3,514,815 | + | C1H3g27866 | C2H3g25222 | LOC_Os03g07930 | Os03g0176100 | - | Detail |
| CX3g025943 | 3:3,516,733-3,520,526 | - | C1H3g31714 | C2H3g07082 | LOC_Os03g07940 | Os03g0176300 | - | Detail |
| CX3g029598 | 3:3,524,664-3,525,152 | + | C1H3g29070 | C2H3g25173 | LOC_Os03g07950 | Os03g0176500 | - | Detail |
| CX3g030266 | 3:3,528,832-3,531,298 | - | C1H3g15283 | C2H3g21895 | LOC_Os03g07960 | Os03g0176700 | - | Detail |
| CX3g029368 | 3:3,532,794-3,536,588 | - | C1H3g23456 | C2H3g00013 | LOC_Os03g07970 | Os03g0176800 | - | Detail |
| CX3g028066 | 3:3,538,243-3,538,563 | - | C1H3g29339 | C2H3g04928 | LOC_Os03g07980 | Os03g0176900 | - | Detail |
| CX3g029737 | 3:3,540,593-3,543,674 | + | C1H3g11831 | C2H3g13522 | LOC_Os03g07990 | Os03g0177000 | - | Detail |
| CX3g030435 | 3:3,544,980-3,548,014 | + | C1H3g26527 | C2H3g03958 | LOC_Os03g08000 | Os03g0177300 | - | Detail |
| CX3g028878 | 3:3,550,061-3,552,111 | + | C1H3g02996 | C2H3g10879 | LOC_Os03g08010 | Os03g0178000 | - | Detail |
| CX3g026443 | 3:3,555,593-3,557,641 | + | C1H3g16670 | C2H3g01446 | LOC_Os03g08020 | Os03g0177500 | OsEF1A | Detail |
| CX3g028070 | 3:3,566,146-3,568,101 | + | C1H3g02996 | C2H3g29734 | LOC_Os03g08020 | Os03g0178000 | - | Detail |
| CX3g025284 | 3:3,572,273-3,574,208 | + | C1H3g16670 | C2H3g10879 | LOC_Os03g08050 | Os03g0177400 | - | Detail |
| CX3g028367 | 3:3,575,019-3,581,584 | - | C1H3g20350 | C2H3g00449 | LOC_Os03g08070 | Os03g0178100 | - | Detail |
| CX3g027428 | 3:3,584,764-3,586,143 | + | C1H3g15649 | C2H3g25180 | LOC_Os03g08080 | Os03g0178200 | - | Detail |
| CX3g029291 | 3:3,586,662-3,587,877 | - | C1H3g27650 | C2H3g26133 | LOC_Os03g08090 | Os03g0178300 | - | Detail |