| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g02735 | 9:17,855,719-17,857,236 | + | C2H9g20569 | CX9g058033 | LOC_Os09g36990 | Os09g0541700 | - | Detail |
| C1H9g18787 | 9:17,857,700-17,861,142 | - | C2H9g19893 | CX9g055298 | LOC_Os09g37000 | Os09g0541900 | - | Detail |
| C1H9g03436 | 9:17,863,151-17,866,167 | - | C2H9g10407 | CX9g056735 | LOC_Os09g37006 | Os09g0542000 | - | Detail |
| C1H9g18054 | 9:17,867,010-17,870,638 | - | C2H9g23287 | CX9g058088 | LOC_Os09g37012 | Os09g0542100 | - | Detail |
| C1H9g17541 | 9:17,874,953-17,877,285 | - | C2H9g00368 | CX9g055142 | LOC_Os09g37020 | Os09g0542200 | - | Detail |
| C1H9g09227 | 9:17,885,869-17,889,526 | + | C2H9g15798 | CX9g057132 | LOC_Os09g37040 | Os09g0542500 | - | Detail |
| C1H9g10374 | 9:17,890,331-17,891,790 | - | C2H9g05399 | CX9g057153 | LOC_Os09g37050 | Os09g0542600 | - | Detail |
| C1H9g10542 | 9:17,895,467-17,897,995 | - | C2H9g07462 | CX9g057571 | LOC_Os09g37060 | Os09g0542700 | - | Detail |
| C1H9g20729 | 9:17,899,088-17,902,834 | - | C2H9g24102 | CX9g054989 | LOC_Os09g37070 | Os09g0542800 | - | Detail |
| C1H9g19954 | 9:17,905,839-17,906,609 | + | - | CX9g055138 | LOC_Os09g37080 | Os09g0542900 | - | Detail |
| C1H9g02114 | 9:17,911,688-17,917,748 | + | C2H9g30539 | CX9g055681 | LOC_Os09g37100 | Os09g0543100 | - | Detail |
| C1H9g01301 | 9:17,929,348-17,930,598 | - | - | CX9g058027 | LOC_Os09g37120 | Os09g0543400 | ODC1 | Detail |
| C1H9g14882 | 9:17,951,080-17,952,387 | + | C2H9g20419 | CX9g056310 | LOC_Os09g37180 | Os09g0543900 | - | Detail |
| C1H9g22634 | 9:17,960,521-17,961,882 | + | C2H9g04352 | CX9g056534 | LOC_Os09g37200 | Os09g0544000 | OsPHT4 | Detail |
| C1H9g07690 | 9:17,972,757-17,979,912 | + | C2H9g00928 | CX9g057415 | LOC_Os09g37230 | Os09g0544300 | - | Detail |
| C1H9g17505 | 9:17,981,171-18,003,962 | + | C2H9g30661 | CX9g057924 | LOC_Os09g37240 | Os09g0544400 | - | Detail |
| C1H9g29018 | 9:18,004,681-18,006,475 | - | C2H9g00491 | CX9g057891 | LOC_Os09g37250 | - | - | Detail |
| C1H9g19143 | 9:18,009,426-18,010,320 | - | C2H9g14558 | CX9g057635 | LOC_Os09g37260 | Os09g0544700 | - | Detail |
| C1H9g28030 | 9:18,010,756-18,014,546 | - | C2H9g28839 | CX9g057831 | LOC_Os09g37270 | Os09g0544800 | Os RopGEF7, OsRopGEF7, OsRacGEF2 | Detail |
| C1H9g26500 | 9:18,023,011-18,027,622 | - | C2H9g10418 | CX9g056668 | LOC_Os09g37280 | Os09g0544900 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g030931 | 3:3,470,322-3,473,263 | - | C1H3g05067 | C2H3g01619 | LOC_Os03g07880 | Os03g0174900 | OsNF-YA1, HAP2C | Detail |
| CX3g031308 | 3:3,482,034-3,483,026 | + | C1H3g04156 | C2H3g14257 | LOC_Os03g07890 | Os03g0175200 | - | Detail |
| CX3g030291 | 3:3,488,780-3,489,103 | + | C1H3g18648 | C2H3g21508 | - | - | - | Detail |
| CX3g025046 | 3:3,489,997-3,494,015 | + | C1H3g26233 | C2H3g07896 | LOC_Os03g07910 | Os03g0175600 | - | Detail |
| CX3g027383 | 3:3,503,101-3,504,039 | - | C1H3g08447 | C2H3g28877 | LOC_Os03g07920 | Os03g0175800 | BG1 | Detail |
| CX3g031114 | 3:3,513,357-3,514,815 | + | C1H3g27866 | C2H3g25222 | LOC_Os03g07930 | Os03g0176100 | - | Detail |
| CX3g025943 | 3:3,516,733-3,520,526 | - | C1H3g31714 | C2H3g07082 | LOC_Os03g07940 | Os03g0176300 | - | Detail |
| CX3g029598 | 3:3,524,664-3,525,152 | + | C1H3g29070 | C2H3g25173 | LOC_Os03g07950 | Os03g0176500 | - | Detail |
| CX3g030266 | 3:3,528,832-3,531,298 | - | C1H3g15283 | C2H3g21895 | LOC_Os03g07960 | Os03g0176700 | - | Detail |
| CX3g029368 | 3:3,532,794-3,536,588 | - | C1H3g23456 | C2H3g00013 | LOC_Os03g07970 | Os03g0176800 | - | Detail |
| CX3g028066 | 3:3,538,243-3,538,563 | - | C1H3g29339 | C2H3g04928 | LOC_Os03g07980 | Os03g0176900 | - | Detail |
| CX3g029737 | 3:3,540,593-3,543,674 | + | C1H3g11831 | C2H3g13522 | LOC_Os03g07990 | Os03g0177000 | - | Detail |
| CX3g030435 | 3:3,544,980-3,548,014 | + | C1H3g26527 | C2H3g03958 | LOC_Os03g08000 | Os03g0177300 | - | Detail |
| CX3g028878 | 3:3,550,061-3,552,111 | + | C1H3g02996 | C2H3g10879 | LOC_Os03g08010 | Os03g0178000 | - | Detail |
| CX3g026443 | 3:3,555,593-3,557,641 | + | C1H3g16670 | C2H3g01446 | LOC_Os03g08020 | Os03g0177500 | OsEF1A | Detail |
| CX3g028070 | 3:3,566,146-3,568,101 | + | C1H3g02996 | C2H3g29734 | LOC_Os03g08020 | Os03g0178000 | - | Detail |
| CX3g025284 | 3:3,572,273-3,574,208 | + | C1H3g16670 | C2H3g10879 | LOC_Os03g08050 | Os03g0177400 | - | Detail |
| CX3g028367 | 3:3,575,019-3,581,584 | - | C1H3g20350 | C2H3g00449 | LOC_Os03g08070 | Os03g0178100 | - | Detail |
| CX3g027428 | 3:3,584,764-3,586,143 | + | C1H3g15649 | C2H3g25180 | LOC_Os03g08080 | Os03g0178200 | - | Detail |
| CX3g029291 | 3:3,586,662-3,587,877 | - | C1H3g27650 | C2H3g26133 | LOC_Os03g08090 | Os03g0178300 | - | Detail |