| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H3g23607 | 3:16,137,145-16,137,691 | + | C1H3g03549 | CX3g026843 | LOC_Os03g31150 | Os03g0425000 | - | Detail |
| C2H3g24777 | 3:16,139,530-16,139,857 | - | C1H3g06307 | CX3g028435 | LOC_Os02g58170 | Os03g0563400 | - | Detail |
| C2H3g29625 | 3:16,142,020-16,143,062 | + | C1H3g03536 | - | - | - | - | Detail |
| C2H3g29941 | 3:16,143,940-16,145,359 | + | C1H3g15507 | CX9g057750 | LOC_Os03g31090 | Os03g0424500 | - | Detail |
| C2H3g02070 | 3:16,148,792-16,152,137 | + | C1H3g06288 | CX3g026843 | LOC_Os03g31150 | Os03g0425000 | - | Detail |
| C2H3g13373 | 3:16,152,706-16,155,867 | - | C1H3g23569 | CX3g026358 | LOC_Os03g31170 | Os03g0425200 | - | Detail |
| C2H3g29562 | 3:16,167,058-16,172,876 | + | C1H3g07104 | CX3g025115 | LOC_Os03g31180 | Os03g0425300 | - | Detail |
| C2H3g24938 | 3:16,178,346-16,180,250 | + | C1H3g07332 | CX3g030946 | LOC_Os03g31210 | Os03g0425600 | - | Detail |
| C2H3g12524 | 3:16,198,271-16,201,931 | + | C1H3g20426 | CX3g025387 | LOC_Os03g31230 | Os03g0425800 | - | Detail |
| C2H3g01389 | 3:16,219,189-16,223,952 | - | C1H3g22127 | CX3g029401 | LOC_Os03g31260 | Os03g0426300 | - | Detail |
| C2H3g18833 | 3:16,239,408-16,239,608 | + | C1H3g16780 | CX3g025661 | LOC_Os03g31290 | Os03g0426800 | - | Detail |
| C2H3g26583 | 3:16,247,699-16,254,421 | + | C1H3g17321 | CX3g031265 | LOC_Os03g31300 | Os03g0426900 | - | Detail |
| C2H3g22373 | 3:16,281,252-16,282,125 | + | C1H3g18318 | CX3g030459 | LOC_Os03g31360 | Os03g0427300 | - | Detail |
| C2H3g09016 | 3:16,282,166-16,282,937 | + | C1H3g18318 | CX3g030459 | LOC_Os03g31360 | Os03g0427300 | - | Detail |
| C2H3g13790 | 3:16,285,724-16,292,834 | + | C1H3g10283 | CX3g031010 | LOC_Os03g31400 | Os03g0427900 | - | Detail |
| C2H3g14816 | 3:16,293,880-16,297,409 | - | C1H3g31158 | CX3g026162 | LOC_Os03g31430 | Os03g0347900 | - | Detail |
| C2H3g18509 | 3:16,297,518-16,298,891 | - | C1H3g31158 | CX3g026162 | LOC_Os03g31430 | Os03g0428200 | - | Detail |
| C2H3g21714 | 3:16,305,845-16,307,476 | - | C1H3g31158 | - | - | Os03g0428200 | - | Detail |
| C2H3g17080 | 3:16,311,662-16,314,940 | - | C1H8g17324 | - | LOC_Os03g04150 | - | - | Detail |
| C2H3g05528 | 3:16,362,675-16,365,594 | + | C1H3g02780 | CX3g027331 | LOC_Os03g31490 | Os03g0428800 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029073 | 3:3,212,047-3,213,381 | - | C1H3g09927 | C2H3g13648 | LOC_Os03g07180 | Os03g0168100 | - | Detail |
| CX3g027260 | 3:3,215,080-3,216,862 | + | C1H3g29196 | C2H3g15532 | LOC_Os03g07190 | Os03g0168200 | - | Detail |
| CX3g028572 | 3:3,217,330-3,218,921 | - | C1H3g00563 | C2H3g27665 | LOC_Os03g07200 | Os03g0168300 | - | Detail |
| CX3g029392 | 3:3,222,114-3,228,333 | + | C1H3g28864 | C2H3g04176 | LOC_Os03g07220 | Os03g0168400 | FLO10 | Detail |
| CX3g030074 | 3:3,228,604-3,230,285 | - | C1H3g15091 | C2H3g16262 | LOC_Os03g07226 | Os03g0168500 | - | Detail |
| CX3g027344 | 3:3,233,821-3,235,455 | - | C1H3g30181 | C2H3g22195 | LOC_Os03g07234 | Os03g0168550 | - | Detail |
| CX3g025173 | 3:3,237,659-3,239,590 | - | C1H3g19869 | C2H3g27571 | LOC_Os03g07250 | Os03g0168600 | CYP704B2, OsCYP704B2 | Detail |
| CX3g027461 | 3:3,240,702-3,242,309 | - | C1H3g04648 | C2H3g09688 | LOC_Os03g07260 | Os03g0168700 | - | Detail |
| CX3g029686 | 3:3,243,286-3,245,088 | + | C1H3g06973 | C2H3g10633 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| CX3g029329 | 3:3,246,187-3,249,081 | + | C1H3g22339 | C2H3g29541 | LOC_Os03g07300 | Os03g0169100 | - | Detail |
| CX3g026826 | 3:3,249,979-3,253,225 | - | C1H3g05071 | C2H3g19913 | LOC_Os03g07310 | Os03g0169000 | - | Detail |
| CX3g027561 | 3:3,258,734-3,260,284 | + | C1H3g30733 | C2H3g06080 | LOC_Os03g07330 | Os03g0169300 | - | Detail |
| CX3g029153 | 3:3,262,022-3,262,793 | - | C1H3g17744 | C2H3g03131 | LOC_Os03g07340 | Os03g0169400 | - | Detail |
| CX3g030421 | 3:3,263,078-3,267,517 | + | C1H3g09565 | C2H3g06080 | LOC_Os03g07350 | Os03g0169500 | OsCSLA4 | Detail |
| CX3g029943 | 3:3,273,041-3,275,304 | + | C1H3g30713 | C2H3g15611 | LOC_Os03g07360 | Os03g0169600 | RDD4, OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12 | Detail |
| CX3g029455 | 3:3,278,800-3,280,096 | - | C1H3g07573 | C2H3g04475 | LOC_Os03g07370 | Os03g0169800 | WSL9 | Detail |
| CX3g026502 | 3:3,281,819-3,284,018 | - | C1H3g28123 | C2H3g13284 | LOC_Os03g07380 | Os03g0169900 | - | Detail |
| CX3g030142 | 3:3,289,764-3,290,129 | - | C1H3g30140 | C2H3g19051 | LOC_Os03g07400 | Os03g0170100 | - | Detail |
| CX3g026147 | 3:3,293,493-3,296,923 | + | C1H3g19291 | C2H3g20350 | LOC_Os03g07420 | Os03g0170300 | - | Detail |
| CX3g030033 | 3:3,298,046-3,300,881 | - | C1H3g10171 | C2H3g22587 | LOC_Os03g07430 | Os03g0170400 | OsRLCK102 | Detail |