| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g15259 | 9:13,434,841-13,435,822 | - | C1H9g15524 | CX9g055347 | LOC_Os09g26470 | Os09g0435250 | - | Detail |
| C2H9g03422 | 9:13,437,865-13,441,018 | - | C1H9g15524 | CX9g055347 | LOC_Os09g26470 | Os09g0435250 | - | Detail |
| C2H9g09724 | 9:13,446,277-13,447,467 | + | C1H9g05369 | CX9g057698 | LOC_Os09g26480 | - | - | Detail |
| C2H9g14632 | 9:13,456,830-13,458,152 | + | C1H9g19041 | CX9g054961 | LOC_Os09g26500 | Os09g0435700 | - | Detail |
| C2H9g30633 | 9:13,459,794-13,462,499 | - | C1H9g08312 | CX9g057172 | LOC_Os09g26560 | Os09g0436700 | - | Detail |
| C2H9g21233 | 9:13,465,283-13,476,610 | + | C1H9g26425 | CX9g056280 | LOC_Os09g26570 | Os09g0436800 | - | Detail |
| C2H9g00492 | 9:13,477,413-13,480,745 | + | C1H9g23177 | CX9g057291 | LOC_Os09g26580 | Os09g0436900 | - | Detail |
| C2H9g23573 | 9:13,522,063-13,523,941 | + | C1H9g21686 | CX9g057952 | LOC_Os09g26620 | Os09g0437500 | - | Detail |
| C2H9g14978 | 9:13,536,716-13,541,741 | + | C1H9g24554 | CX9g055490 | LOC_Os09g26650 | Os09g0437900 | - | Detail |
| C2H9g27047 | 9:13,553,018-13,564,034 | + | C1H9g08513 | CX9g054927 | LOC_Os09g26660 | Os09g0438000 | - | Detail |
| C2H9g20994 | 9:13,576,305-13,580,039 | + | C1H9g20112 | CX9g057379 | LOC_Os09g26700 | Os09g0438400 | - | Detail |
| C2H9g14306 | 9:13,584,816-13,588,809 | - | C1H9g28577 | CX9g055603 | LOC_Os09g26730 | Os09g0438700 | - | Detail |
| C2H9g11312 | 9:13,589,802-13,595,397 | - | C1H9g16805 | CX9g056328 | LOC_Os09g26760 | Os09g0439000 | - | Detail |
| C2H9g23826 | 9:13,601,591-13,602,833 | - | C1H9g29651 | CX9g056370 | LOC_Os09g26780 | Os09g0439200 | TIFY10C, OsJAZ7, OsJAZ 8, OsJAZ8, Os-JAZ8, JAZ8, OsTIFY10c, OsTIFY10c/OsJAZ8 | Detail |
| C2H9g11140 | 9:13,611,056-13,615,575 | + | C1H9g23984 | CX9g055995 | LOC_Os09g26800 | Os09g0439400 | - | Detail |
| C2H9g08335 | 9:13,616,371-13,619,064 | + | C1H9g04697 | CX9g055543 | LOC_Os09g26810 | Os09g0439500 | - | Detail |
| C2H9g01871 | 9:13,629,522-13,633,996 | - | C1H9g08389 | CX9g057070 | LOC_Os09g26830 | Os09g0439700 | - | Detail |
| C2H9g05545 | 9:13,636,587-13,639,099 | - | C1H9g03005 | CX9g056810 | LOC_Os09g26840 | Os09g0439800 | DRO1, Dro1 | Detail |
| C2H9g26904 | 9:13,651,920-13,656,034 | + | C1H9g31362 | CX9g057829 | LOC_Os09g26870 | Os09g0440200 | - | Detail |
| C2H9g23477 | 9:13,656,062-13,663,114 | - | C1H9g12516 | CX9g057254 | LOC_Os09g26880 | Os09g0440300 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029073 | 3:3,212,047-3,213,381 | - | C1H3g09927 | C2H3g13648 | LOC_Os03g07180 | Os03g0168100 | - | Detail |
| CX3g027260 | 3:3,215,080-3,216,862 | + | C1H3g29196 | C2H3g15532 | LOC_Os03g07190 | Os03g0168200 | - | Detail |
| CX3g028572 | 3:3,217,330-3,218,921 | - | C1H3g00563 | C2H3g27665 | LOC_Os03g07200 | Os03g0168300 | - | Detail |
| CX3g029392 | 3:3,222,114-3,228,333 | + | C1H3g28864 | C2H3g04176 | LOC_Os03g07220 | Os03g0168400 | FLO10 | Detail |
| CX3g030074 | 3:3,228,604-3,230,285 | - | C1H3g15091 | C2H3g16262 | LOC_Os03g07226 | Os03g0168500 | - | Detail |
| CX3g027344 | 3:3,233,821-3,235,455 | - | C1H3g30181 | C2H3g22195 | LOC_Os03g07234 | Os03g0168550 | - | Detail |
| CX3g025173 | 3:3,237,659-3,239,590 | - | C1H3g19869 | C2H3g27571 | LOC_Os03g07250 | Os03g0168600 | CYP704B2, OsCYP704B2 | Detail |
| CX3g027461 | 3:3,240,702-3,242,309 | - | C1H3g04648 | C2H3g09688 | LOC_Os03g07260 | Os03g0168700 | - | Detail |
| CX3g029686 | 3:3,243,286-3,245,088 | + | C1H3g06973 | C2H3g10633 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| CX3g029329 | 3:3,246,187-3,249,081 | + | C1H3g22339 | C2H3g29541 | LOC_Os03g07300 | Os03g0169100 | - | Detail |
| CX3g026826 | 3:3,249,979-3,253,225 | - | C1H3g05071 | C2H3g19913 | LOC_Os03g07310 | Os03g0169000 | - | Detail |
| CX3g027561 | 3:3,258,734-3,260,284 | + | C1H3g30733 | C2H3g06080 | LOC_Os03g07330 | Os03g0169300 | - | Detail |
| CX3g029153 | 3:3,262,022-3,262,793 | - | C1H3g17744 | C2H3g03131 | LOC_Os03g07340 | Os03g0169400 | - | Detail |
| CX3g030421 | 3:3,263,078-3,267,517 | + | C1H3g09565 | C2H3g06080 | LOC_Os03g07350 | Os03g0169500 | OsCSLA4 | Detail |
| CX3g029943 | 3:3,273,041-3,275,304 | + | C1H3g30713 | C2H3g15611 | LOC_Os03g07360 | Os03g0169600 | RDD4, OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12 | Detail |
| CX3g029455 | 3:3,278,800-3,280,096 | - | C1H3g07573 | C2H3g04475 | LOC_Os03g07370 | Os03g0169800 | WSL9 | Detail |
| CX3g026502 | 3:3,281,819-3,284,018 | - | C1H3g28123 | C2H3g13284 | LOC_Os03g07380 | Os03g0169900 | - | Detail |
| CX3g030142 | 3:3,289,764-3,290,129 | - | C1H3g30140 | C2H3g19051 | LOC_Os03g07400 | Os03g0170100 | - | Detail |
| CX3g026147 | 3:3,293,493-3,296,923 | + | C1H3g19291 | C2H3g20350 | LOC_Os03g07420 | Os03g0170300 | - | Detail |
| CX3g030033 | 3:3,298,046-3,300,881 | - | C1H3g10171 | C2H3g22587 | LOC_Os03g07430 | Os03g0170400 | OsRLCK102 | Detail |