| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02618 | 5:19,209,893-19,212,054 | - | C2H5g18071 | CX1g001859 | LOC_Os05g39960 | Os05g0477300 | - | Detail |
| C1H5g30837 | 5:19,212,462-19,214,127 | - | C2H5g02002 | CX5g039095 | - | Os05g0204600 | OsBBX14, OsDBB3b | Detail |
| C1H5g02202 | 5:19,214,514-19,218,768 | - | C2H5g14247 | CX5g038009 | LOC_Os05g39980 | Os05g0477500 | - | Detail |
| C1H5g30215 | 5:19,220,885-19,222,240 | - | C2H5g20824 | CX5g040535 | LOC_Os05g39990 | Os05g0477600 | OsEXPA4, OsEXP4 | Detail |
| C1H5g10767 | 5:19,229,853-19,230,374 | + | C2H5g15346 | CX5g040284 | LOC_Os05g40010 | Os05g0477900 | - | Detail |
| C1H5g07203 | 5:19,231,508-19,232,077 | + | C2H5g20467 | CX5g041113 | LOC_Os05g40020 | Os05g0478000 | - | Detail |
| C1H5g10010 | 5:19,236,202-19,240,443 | + | C2H5g12806 | CX5g040411 | LOC_Os05g40040 | Os05g0478200 | - | Detail |
| C1H5g00196 | 5:19,244,069-19,247,664 | + | C2H5g01765 | CX5g038363 | LOC_Os05g40050 | Os05g0478300 | - | Detail |
| C1H5g12837 | 5:19,256,829-19,259,414 | - | C2H5g08495 | CX5g037318 | LOC_Os05g40070 | Os05g0478700 | - | Detail |
| C1H5g11113 | 5:19,267,520-19,268,612 | - | C2H5g25461 | CX5g037363 | LOC_Os05g40080 | Os05g0478800 | OsWRKY54 | Detail |
| C1H5g26849 | 5:19,274,692-19,275,736 | - | C2H5g10570 | CX5g037363 | LOC_Os05g40080 | Os05g0478800 | OsWRKY54 | Detail |
| C1H5g24241 | 5:19,289,281-19,289,553 | - | C2H5g08801 | CX5g039436 | LOC_Os05g40150 | Os05g0479700 | - | Detail |
| C1H5g06063 | 5:19,291,970-19,294,501 | - | C2H5g08801 | CX5g039436 | LOC_Os05g40150 | Os05g0479700 | - | Detail |
| C1H5g29758 | 5:19,296,689-19,299,292 | + | C2H5g20369 | - | LOC_Os05g40160 | Os05g0479800 | - | Detail |
| C1H5g04289 | 5:19,302,735-19,303,849 | - | C2H5g10573 | CX5g040657 | LOC_Os05g40170 | Os05g0479900 | - | Detail |
| C1H5g15872 | 5:19,305,798-19,308,870 | + | C2H5g25386 | CX5g038549 | LOC_Os05g40180 | Os05g0480000 | - | Detail |
| C1H5g28899 | 5:19,309,029-19,309,840 | - | C2H5g29302 | CX5g040025 | LOC_Os05g40190 | Os05g0480200 | - | Detail |
| C1H5g23691 | 5:19,311,773-19,317,010 | - | C2H5g01124 | CX5g039013 | LOC_Os05g40200 | Os05g0480400 | - | Detail |
| C1H5g19892 | 5:19,328,890-19,333,156 | - | C2H5g07858 | CX5g037523 | LOC_Os05g40220 | Os05g0480600 | - | Detail |
| C1H5g06303 | 5:19,338,827-19,340,315 | + | C2H5g15641 | CX5g037415 | LOC_Os05g40230 | Os05g0480700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029073 | 3:3,212,047-3,213,381 | - | C1H3g09927 | C2H3g13648 | LOC_Os03g07180 | Os03g0168100 | - | Detail |
| CX3g027260 | 3:3,215,080-3,216,862 | + | C1H3g29196 | C2H3g15532 | LOC_Os03g07190 | Os03g0168200 | - | Detail |
| CX3g028572 | 3:3,217,330-3,218,921 | - | C1H3g00563 | C2H3g27665 | LOC_Os03g07200 | Os03g0168300 | - | Detail |
| CX3g029392 | 3:3,222,114-3,228,333 | + | C1H3g28864 | C2H3g04176 | LOC_Os03g07220 | Os03g0168400 | FLO10 | Detail |
| CX3g030074 | 3:3,228,604-3,230,285 | - | C1H3g15091 | C2H3g16262 | LOC_Os03g07226 | Os03g0168500 | - | Detail |
| CX3g027344 | 3:3,233,821-3,235,455 | - | C1H3g30181 | C2H3g22195 | LOC_Os03g07234 | Os03g0168550 | - | Detail |
| CX3g025173 | 3:3,237,659-3,239,590 | - | C1H3g19869 | C2H3g27571 | LOC_Os03g07250 | Os03g0168600 | CYP704B2, OsCYP704B2 | Detail |
| CX3g027461 | 3:3,240,702-3,242,309 | - | C1H3g04648 | C2H3g09688 | LOC_Os03g07260 | Os03g0168700 | - | Detail |
| CX3g029686 | 3:3,243,286-3,245,088 | + | C1H3g06973 | C2H3g10633 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| CX3g029329 | 3:3,246,187-3,249,081 | + | C1H3g22339 | C2H3g29541 | LOC_Os03g07300 | Os03g0169100 | - | Detail |
| CX3g026826 | 3:3,249,979-3,253,225 | - | C1H3g05071 | C2H3g19913 | LOC_Os03g07310 | Os03g0169000 | - | Detail |
| CX3g027561 | 3:3,258,734-3,260,284 | + | C1H3g30733 | C2H3g06080 | LOC_Os03g07330 | Os03g0169300 | - | Detail |
| CX3g029153 | 3:3,262,022-3,262,793 | - | C1H3g17744 | C2H3g03131 | LOC_Os03g07340 | Os03g0169400 | - | Detail |
| CX3g030421 | 3:3,263,078-3,267,517 | + | C1H3g09565 | C2H3g06080 | LOC_Os03g07350 | Os03g0169500 | OsCSLA4 | Detail |
| CX3g029943 | 3:3,273,041-3,275,304 | + | C1H3g30713 | C2H3g15611 | LOC_Os03g07360 | Os03g0169600 | RDD4, OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12 | Detail |
| CX3g029455 | 3:3,278,800-3,280,096 | - | C1H3g07573 | C2H3g04475 | LOC_Os03g07370 | Os03g0169800 | WSL9 | Detail |
| CX3g026502 | 3:3,281,819-3,284,018 | - | C1H3g28123 | C2H3g13284 | LOC_Os03g07380 | Os03g0169900 | - | Detail |
| CX3g030142 | 3:3,289,764-3,290,129 | - | C1H3g30140 | C2H3g19051 | LOC_Os03g07400 | Os03g0170100 | - | Detail |
| CX3g026147 | 3:3,293,493-3,296,923 | + | C1H3g19291 | C2H3g20350 | LOC_Os03g07420 | Os03g0170300 | - | Detail |
| CX3g030033 | 3:3,298,046-3,300,881 | - | C1H3g10171 | C2H3g22587 | LOC_Os03g07430 | Os03g0170400 | OsRLCK102 | Detail |