| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H4g20793 | 4:27,996,745-28,003,715 | + | C2H4g25755 | CX4g033819 | LOC_Os04g53630 | Os04g0628200 | - | Detail |
| C1H4g00150 | 4:28,007,543-28,011,390 | - | C2H4g12158 | CX4g035421 | LOC_Os04g53660 | Os04g0628400 | - | Detail |
| C1H4g16750 | 4:28,012,532-28,022,937 | - | C2H4g14925 | CX4g031603 | LOC_Os04g53670 | Os04g0628600 | - | Detail |
| C1H4g04700 | 4:28,026,258-28,028,071 | + | C2H4g23818 | CX4g034974 | LOC_Os04g53680 | Os04g0628900 | - | Detail |
| C1H4g12167 | 4:28,029,058-28,031,757 | + | C2H4g29403 | CX4g036640 | LOC_Os04g53690 | Os04g0629000 | - | Detail |
| C1H4g18446 | 4:28,032,211-28,036,823 | - | C2H4g22771 | CX4g034413 | LOC_Os04g53700 | Os04g0629100 | - | Detail |
| C1H4g24587 | 4:28,038,332-28,039,233 | + | C2H4g09379 | CX4g036336 | LOC_Os04g53710 | Os04g0629200 | - | Detail |
| C1H4g06832 | 4:28,040,112-28,045,555 | - | C2H4g19513 | CX4g032888 | LOC_Os04g53720 | Os04g0629300 | OsCHR715, CHR715 | Detail |
| C1H4g16584 | 4:28,048,137-28,051,341 | - | C2H4g17413 | CX4g034863 | LOC_Os04g53730 | Os04g0629500 | - | Detail |
| C1H4g15851 | 4:28,054,170-28,059,373 | - | C2H4g19571 | CX4g031785 | LOC_Os04g53760 | Os04g0629700 | - | Detail |
| C1H4g29594 | 4:28,063,848-28,068,831 | + | C2H4g13776 | CX4g033909 | LOC_Os04g53770 | Os04g0630000 | - | Detail |
| C1H4g05143 | 4:28,069,148-28,072,204 | + | C2H4g28555 | - | LOC_Os04g53780 | Os04g0630100 | - | Detail |
| C1H4g17189 | 4:28,072,378-28,072,902 | + | C2H4g01017 | - | LOC_Os04g53800 | Os04g0630300 | - | Detail |
| C1H4g12453 | 4:28,072,936-28,073,139 | + | C2H4g09464 | - | LOC_Os04g53800 | Os04g0630300 | - | Detail |
| C1H4g10023 | 4:28,075,252-28,081,556 | + | C2H4g11838 | - | LOC_Os04g53800 | Os04g0630300 | - | Detail |
| C1H4g09076 | 4:28,089,882-28,091,468 | + | C2H4g17007 | - | LOC_Os04g53810 | Os04g0630400 | - | Detail |
| C1H4g26963 | 4:28,093,695-28,096,155 | + | C2H4g05751 | - | LOC_Os04g53850 | Os04g0630800 | - | Detail |
| C1H4g07842 | 4:28,098,956-28,100,995 | + | C2H4g23977 | - | LOC_Os04g53920 | Os04g0631000 | - | Detail |
| C1H4g18028 | 4:28,103,764-28,105,291 | + | C2H4g23977 | - | LOC_Os04g53920 | Os04g0631000 | - | Detail |
| C1H4g25664 | 4:28,105,746-28,106,414 | + | C2H4g15838 | - | LOC_Os04g53920 | Os04g0631000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029073 | 3:3,212,047-3,213,381 | - | C1H3g09927 | C2H3g13648 | LOC_Os03g07180 | Os03g0168100 | - | Detail |
| CX3g027260 | 3:3,215,080-3,216,862 | + | C1H3g29196 | C2H3g15532 | LOC_Os03g07190 | Os03g0168200 | - | Detail |
| CX3g028572 | 3:3,217,330-3,218,921 | - | C1H3g00563 | C2H3g27665 | LOC_Os03g07200 | Os03g0168300 | - | Detail |
| CX3g029392 | 3:3,222,114-3,228,333 | + | C1H3g28864 | C2H3g04176 | LOC_Os03g07220 | Os03g0168400 | FLO10 | Detail |
| CX3g030074 | 3:3,228,604-3,230,285 | - | C1H3g15091 | C2H3g16262 | LOC_Os03g07226 | Os03g0168500 | - | Detail |
| CX3g027344 | 3:3,233,821-3,235,455 | - | C1H3g30181 | C2H3g22195 | LOC_Os03g07234 | Os03g0168550 | - | Detail |
| CX3g025173 | 3:3,237,659-3,239,590 | - | C1H3g19869 | C2H3g27571 | LOC_Os03g07250 | Os03g0168600 | CYP704B2, OsCYP704B2 | Detail |
| CX3g027461 | 3:3,240,702-3,242,309 | - | C1H3g04648 | C2H3g09688 | LOC_Os03g07260 | Os03g0168700 | - | Detail |
| CX3g029686 | 3:3,243,286-3,245,088 | + | C1H3g06973 | C2H3g10633 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| CX3g029329 | 3:3,246,187-3,249,081 | + | C1H3g22339 | C2H3g29541 | LOC_Os03g07300 | Os03g0169100 | - | Detail |
| CX3g026826 | 3:3,249,979-3,253,225 | - | C1H3g05071 | C2H3g19913 | LOC_Os03g07310 | Os03g0169000 | - | Detail |
| CX3g027561 | 3:3,258,734-3,260,284 | + | C1H3g30733 | C2H3g06080 | LOC_Os03g07330 | Os03g0169300 | - | Detail |
| CX3g029153 | 3:3,262,022-3,262,793 | - | C1H3g17744 | C2H3g03131 | LOC_Os03g07340 | Os03g0169400 | - | Detail |
| CX3g030421 | 3:3,263,078-3,267,517 | + | C1H3g09565 | C2H3g06080 | LOC_Os03g07350 | Os03g0169500 | OsCSLA4 | Detail |
| CX3g029943 | 3:3,273,041-3,275,304 | + | C1H3g30713 | C2H3g15611 | LOC_Os03g07360 | Os03g0169600 | RDD4, OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12 | Detail |
| CX3g029455 | 3:3,278,800-3,280,096 | - | C1H3g07573 | C2H3g04475 | LOC_Os03g07370 | Os03g0169800 | WSL9 | Detail |
| CX3g026502 | 3:3,281,819-3,284,018 | - | C1H3g28123 | C2H3g13284 | LOC_Os03g07380 | Os03g0169900 | - | Detail |
| CX3g030142 | 3:3,289,764-3,290,129 | - | C1H3g30140 | C2H3g19051 | LOC_Os03g07400 | Os03g0170100 | - | Detail |
| CX3g026147 | 3:3,293,493-3,296,923 | + | C1H3g19291 | C2H3g20350 | LOC_Os03g07420 | Os03g0170300 | - | Detail |
| CX3g030033 | 3:3,298,046-3,300,881 | - | C1H3g10171 | C2H3g22587 | LOC_Os03g07430 | Os03g0170400 | OsRLCK102 | Detail |