| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g16145 | 2:4,017,794-4,019,888 | - | C2H2g09386 | CX2g023298 | LOC_Os02g08520 | Os02g0182500 | - | Detail |
| C1H2g26199 | 2:4,021,605-4,022,177 | - | - | CX7g047184 | - | - | - | Detail |
| C1H2g10666 | 2:4,025,237-4,029,158 | - | C2H2g23959 | CX2g022435 | LOC_Os02g08530 | Os02g0182600 | - | Detail |
| C1H2g07899 | 2:4,045,162-4,049,973 | + | C2H2g22151 | CX2g023285 | LOC_Os02g08540 | Os02g0182700 | - | Detail |
| C1H2g19304 | 2:4,053,034-4,056,396 | + | C2H2g26483 | CX2g019858 | LOC_Os02g08544 | Os02g0182800 | HOS58, HOS58S | Detail |
| C1H2g30440 | 2:4,057,247-4,057,558 | - | C2H2g27479 | CX2g023048 | LOC_Os02g09050 | Os02g0182850 | - | Detail |
| C1H2g11349 | 2:4,057,850-4,062,398 | - | C2H2g14218 | CX2g023600 | LOC_Os02g09060 | Os02g0182900 | APIP10 | Detail |
| C1H2g30853 | 2:4,068,471-4,069,788 | - | C2H2g30470 | CX2g024933 | LOC_Os02g09070 | Os02g0183000 | - | Detail |
| C1H2g22110 | 2:4,077,296-4,080,356 | + | C2H2g14504 | CX2g019455 | LOC_Os02g09080 | Os02g0183500 | - | Detail |
| C1H2g28242 | 2:4,081,804-4,082,232 | + | C2H2g21842 | CX2g020062 | LOC_Os02g09090 | - | - | Detail |
| C1H2g22796 | 2:4,083,913-4,090,021 | - | C2H2g03930 | CX2g022098 | LOC_Os02g09100 | Os02g0778200 | - | Detail |
| C1H2g16291 | 2:4,095,496-4,098,946 | - | C2H2g28520 | CX2g022098 | LOC_Os02g09120 | Os02g0183900 | - | Detail |
| C1H2g09464 | 2:4,100,339-4,108,575 | - | C2H2g08015 | CX2g022231 | LOC_Os02g09130 | Os02g0184000 | - | Detail |
| C1H2g04783 | 2:4,109,604-4,112,279 | + | C2H2g08234 | CX2g022374 | LOC_Os02g09140 | - | - | Detail |
| C1H2g02685 | 2:4,112,938-4,118,560 | - | C2H2g03857 | CX2g024124 | LOC_Os02g09150 | Os02g0184200 | - | Detail |
| C1H2g18161 | 2:4,126,065-4,134,002 | + | C2H2g12249 | CX2g021779 | LOC_Os02g09170 | Os02g0184400 | - | Detail |
| C1H2g29318 | 2:4,135,737-4,137,953 | + | C2H2g09672 | CX2g024843 | LOC_Os02g09180 | Os02g0184500 | - | Detail |
| C1H2g06181 | 2:4,138,796-4,140,488 | - | C2H2g19235 | - | LOC_Os02g09190 | Os02g0184600 | - | Detail |
| C1H2g25129 | 2:4,141,832-4,143,517 | - | C2H2g21851 | - | LOC_Os02g09200 | Os02g0184700 | - | Detail |
| C1H2g13061 | 2:4,155,439-4,158,361 | + | C2H2g14090 | - | LOC_Os02g09220 | Os02g0184900 | OsCYP71D8L | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029073 | 3:3,212,047-3,213,381 | - | C1H3g09927 | C2H3g13648 | LOC_Os03g07180 | Os03g0168100 | - | Detail |
| CX3g027260 | 3:3,215,080-3,216,862 | + | C1H3g29196 | C2H3g15532 | LOC_Os03g07190 | Os03g0168200 | - | Detail |
| CX3g028572 | 3:3,217,330-3,218,921 | - | C1H3g00563 | C2H3g27665 | LOC_Os03g07200 | Os03g0168300 | - | Detail |
| CX3g029392 | 3:3,222,114-3,228,333 | + | C1H3g28864 | C2H3g04176 | LOC_Os03g07220 | Os03g0168400 | FLO10 | Detail |
| CX3g030074 | 3:3,228,604-3,230,285 | - | C1H3g15091 | C2H3g16262 | LOC_Os03g07226 | Os03g0168500 | - | Detail |
| CX3g027344 | 3:3,233,821-3,235,455 | - | C1H3g30181 | C2H3g22195 | LOC_Os03g07234 | Os03g0168550 | - | Detail |
| CX3g025173 | 3:3,237,659-3,239,590 | - | C1H3g19869 | C2H3g27571 | LOC_Os03g07250 | Os03g0168600 | CYP704B2, OsCYP704B2 | Detail |
| CX3g027461 | 3:3,240,702-3,242,309 | - | C1H3g04648 | C2H3g09688 | LOC_Os03g07260 | Os03g0168700 | - | Detail |
| CX3g029686 | 3:3,243,286-3,245,088 | + | C1H3g06973 | C2H3g10633 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| CX3g029329 | 3:3,246,187-3,249,081 | + | C1H3g22339 | C2H3g29541 | LOC_Os03g07300 | Os03g0169100 | - | Detail |
| CX3g026826 | 3:3,249,979-3,253,225 | - | C1H3g05071 | C2H3g19913 | LOC_Os03g07310 | Os03g0169000 | - | Detail |
| CX3g027561 | 3:3,258,734-3,260,284 | + | C1H3g30733 | C2H3g06080 | LOC_Os03g07330 | Os03g0169300 | - | Detail |
| CX3g029153 | 3:3,262,022-3,262,793 | - | C1H3g17744 | C2H3g03131 | LOC_Os03g07340 | Os03g0169400 | - | Detail |
| CX3g030421 | 3:3,263,078-3,267,517 | + | C1H3g09565 | C2H3g06080 | LOC_Os03g07350 | Os03g0169500 | OsCSLA4 | Detail |
| CX3g029943 | 3:3,273,041-3,275,304 | + | C1H3g30713 | C2H3g15611 | LOC_Os03g07360 | Os03g0169600 | RDD4, OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12 | Detail |
| CX3g029455 | 3:3,278,800-3,280,096 | - | C1H3g07573 | C2H3g04475 | LOC_Os03g07370 | Os03g0169800 | WSL9 | Detail |
| CX3g026502 | 3:3,281,819-3,284,018 | - | C1H3g28123 | C2H3g13284 | LOC_Os03g07380 | Os03g0169900 | - | Detail |
| CX3g030142 | 3:3,289,764-3,290,129 | - | C1H3g30140 | C2H3g19051 | LOC_Os03g07400 | Os03g0170100 | - | Detail |
| CX3g026147 | 3:3,293,493-3,296,923 | + | C1H3g19291 | C2H3g20350 | LOC_Os03g07420 | Os03g0170300 | - | Detail |
| CX3g030033 | 3:3,298,046-3,300,881 | - | C1H3g10171 | C2H3g22587 | LOC_Os03g07430 | Os03g0170400 | OsRLCK102 | Detail |