| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H9g23233 | 9:18,623,230-18,624,286 | + | C2H9g29195 | CX9g055091 | LOC_Os09g38560 | Os09g0558100 | - | Detail |
| C1H9g06849 | 9:18,631,089-18,634,595 | + | C2H9g24336 | CX9g057634 | LOC_Os09g38570 | Os09g0558200 | - | Detail |
| C1H9g11940 | 9:18,635,402-18,640,178 | + | C2H9g29603 | CX9g057885 | LOC_Os09g38580 | Os09g0558300 | - | Detail |
| C1H9g18523 | 9:18,641,013-18,642,284 | + | C2H9g25482 | CX9g054863 | LOC_Os09g38600 | Os09g0558600 | - | Detail |
| C1H9g23887 | 9:18,643,309-18,645,100 | + | C2H9g28361 | CX9g054863 | LOC_Os09g38600 | Os09g0558600 | - | Detail |
| C1H9g12892 | 9:18,652,530-18,658,426 | - | C2H9g08101 | CX9g057540 | LOC_Os09g38620 | Os09g0558900 | - | Detail |
| C1H9g30051 | 9:18,660,568-18,662,143 | - | C2H9g16871 | CX9g056273 | LOC_Os09g38630 | Os09g0559000 | - | Detail |
| C1H9g29805 | 9:18,663,194-18,664,990 | - | C2H9g16871 | CX9g055112 | LOC_Os09g38640 | Os09g0559100 | - | Detail |
| C1H9g13819 | 9:18,665,503-18,666,704 | - | C2H9g14835 | CX9g057198 | LOC_Os09g38650 | Os09g0559200 | - | Detail |
| C1H9g00438 | 9:18,704,698-18,705,423 | - | C2H9g03456 | CX9g057039 | LOC_Os09g38660 | Os09g0559500 | - | Detail |
| C1H9g14616 | 9:18,712,032-18,719,757 | + | C2H9g28114 | CX9g058047 | LOC_Os09g35890 | Os09g0528000 | - | Detail |
| C1H9g23376 | 9:18,745,775-18,748,051 | - | C2H9g03456 | CX9g057059 | LOC_Os09g38660 | Os09g0559500 | - | Detail |
| C1H9g31776 | 9:18,750,014-18,751,453 | + | C2H9g09986 | CX9g055045 | LOC_Os09g38670 | Os09g0559600 | - | Detail |
| C1H9g23848 | 9:18,755,402-18,759,536 | + | C2H9g10035 | CX9g054964 | LOC_Os09g38690 | Os09g0559800 | - | Detail |
| C1H9g29424 | 9:18,760,024-18,764,631 | + | C2H9g14153 | CX9g056386 | LOC_Os09g38700 | Os09g0559900 | - | Detail |
| C1H9g13760 | 9:18,764,992-18,770,365 | - | C2H9g30091 | CX9g056090 | LOC_Os09g38710 | Os09g0560000 | - | Detail |
| C1H9g27267 | 9:18,771,758-18,775,333 | + | C2H9g03510 | CX9g058051 | LOC_Os09g38720 | Os09g0560100 | - | Detail |
| C1H9g15569 | 9:18,775,674-18,776,109 | - | C2H9g12252 | CX9g056999 | - | Os09g0560150 | - | Detail |
| C1H9g04472 | 9:18,776,309-18,777,655 | + | C2H9g03851 | CX9g056836 | LOC_Os09g38730 | Os09g0560200 | - | Detail |
| C1H9g20526 | 9:18,778,229-18,780,020 | - | C2H9g00285 | CX9g056539 | LOC_Os09g38740 | Os09g0560300 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g029073 | 3:3,212,047-3,213,381 | - | C1H3g09927 | C2H3g13648 | LOC_Os03g07180 | Os03g0168100 | - | Detail |
| CX3g027260 | 3:3,215,080-3,216,862 | + | C1H3g29196 | C2H3g15532 | LOC_Os03g07190 | Os03g0168200 | - | Detail |
| CX3g028572 | 3:3,217,330-3,218,921 | - | C1H3g00563 | C2H3g27665 | LOC_Os03g07200 | Os03g0168300 | - | Detail |
| CX3g029392 | 3:3,222,114-3,228,333 | + | C1H3g28864 | C2H3g04176 | LOC_Os03g07220 | Os03g0168400 | FLO10 | Detail |
| CX3g030074 | 3:3,228,604-3,230,285 | - | C1H3g15091 | C2H3g16262 | LOC_Os03g07226 | Os03g0168500 | - | Detail |
| CX3g027344 | 3:3,233,821-3,235,455 | - | C1H3g30181 | C2H3g22195 | LOC_Os03g07234 | Os03g0168550 | - | Detail |
| CX3g025173 | 3:3,237,659-3,239,590 | - | C1H3g19869 | C2H3g27571 | LOC_Os03g07250 | Os03g0168600 | CYP704B2, OsCYP704B2 | Detail |
| CX3g027461 | 3:3,240,702-3,242,309 | - | C1H3g04648 | C2H3g09688 | LOC_Os03g07260 | Os03g0168700 | - | Detail |
| CX3g029686 | 3:3,243,286-3,245,088 | + | C1H3g06973 | C2H3g10633 | LOC_Os03g07290 | Os03g0168900 | OsGERLP | Detail |
| CX3g029329 | 3:3,246,187-3,249,081 | + | C1H3g22339 | C2H3g29541 | LOC_Os03g07300 | Os03g0169100 | - | Detail |
| CX3g026826 | 3:3,249,979-3,253,225 | - | C1H3g05071 | C2H3g19913 | LOC_Os03g07310 | Os03g0169000 | - | Detail |
| CX3g027561 | 3:3,258,734-3,260,284 | + | C1H3g30733 | C2H3g06080 | LOC_Os03g07330 | Os03g0169300 | - | Detail |
| CX3g029153 | 3:3,262,022-3,262,793 | - | C1H3g17744 | C2H3g03131 | LOC_Os03g07340 | Os03g0169400 | - | Detail |
| CX3g030421 | 3:3,263,078-3,267,517 | + | C1H3g09565 | C2H3g06080 | LOC_Os03g07350 | Os03g0169500 | OsCSLA4 | Detail |
| CX3g029943 | 3:3,273,041-3,275,304 | + | C1H3g30713 | C2H3g15611 | LOC_Os03g07360 | Os03g0169600 | RDD4, OsDof12, Dof12, OsDof-12, OsCDF1, OsCDF1/OsDOF12, OsDOF12, CDF1, DOF12 | Detail |
| CX3g029455 | 3:3,278,800-3,280,096 | - | C1H3g07573 | C2H3g04475 | LOC_Os03g07370 | Os03g0169800 | WSL9 | Detail |
| CX3g026502 | 3:3,281,819-3,284,018 | - | C1H3g28123 | C2H3g13284 | LOC_Os03g07380 | Os03g0169900 | - | Detail |
| CX3g030142 | 3:3,289,764-3,290,129 | - | C1H3g30140 | C2H3g19051 | LOC_Os03g07400 | Os03g0170100 | - | Detail |
| CX3g026147 | 3:3,293,493-3,296,923 | + | C1H3g19291 | C2H3g20350 | LOC_Os03g07420 | Os03g0170300 | - | Detail |
| CX3g030033 | 3:3,298,046-3,300,881 | - | C1H3g10171 | C2H3g22587 | LOC_Os03g07430 | Os03g0170400 | OsRLCK102 | Detail |