| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g26145 | 1:17,380,958-17,391,445 | + | C1H1g30357 | CX1g001131 | LOC_Os01g33800 | Os01g0521500 | - | Detail |
| C2H1g21205 | 1:17,411,129-17,412,480 | + | C1H1g25202 | CX1g005107 | LOC_Os01g33910 | Os01g0522100 | - | Detail |
| C2H1g18568 | 1:17,430,070-17,433,767 | + | C1H1g08450 | CX1g005107 | LOC_Os01g33930 | Os01g0522950 | - | Detail |
| C2H1g11782 | 1:17,436,425-17,439,737 | + | C1H1g10941 | CX1g006523 | LOC_Os01g33950 | Os01g0523100 | - | Detail |
| C2H1g13197 | 1:17,448,535-17,456,498 | + | C1H1g09014 | CX1g005107 | LOC_Os01g34000 | Os01g0524100 | ESA1 | Detail |
| C2H1g22021 | 1:17,484,938-17,486,550 | + | C1H1g03031 | CX1g000293 | LOC_Os01g34060 | Os01g0863300 | - | Detail |
| C2H1g01344 | 1:17,499,948-17,510,518 | + | C1H1g05337 | CX1g003083 | LOC_Os01g34080 | Os01g0524700 | - | Detail |
| C2H1g28979 | 1:17,563,858-17,564,544 | + | C1H1g08661 | - | - | - | - | Detail |
| C2H1g17057 | 1:17,566,324-17,569,069 | + | C1H1g01010 | CX1g002923 | LOC_Os01g34190 | Os01g0526100 | - | Detail |
| C2H1g19688 | 1:17,570,292-17,573,584 | + | C1H1g10979 | CX1g003716 | LOC_Os01g34200 | Os01g0526200 | - | Detail |
| C2H1g06550 | 1:17,610,748-17,626,534 | + | C1H1g28687 | CX1g006793 | LOC_Os01g34330 | Os01g0527400 | - | Detail |
| C2H1g06422 | 1:17,627,454-17,632,664 | - | C1H1g03628 | CX1g000241 | LOC_Os01g34350 | Os01g0527600 | SHL2, shl2, SHL2, sh2, OsRDR6 | Detail |
| C2H1g29503 | 1:17,637,195-17,642,074 | - | C1H1g18093 | CX1g004192 | LOC_Os01g34390 | Os01g0527700 | - | Detail |
| C2H1g02847 | 1:17,644,764-17,656,610 | + | C1H1g30321 | CX1g007113 | LOC_Os01g34430 | Os01g0528000 | - | Detail |
| C2H1g18148 | 1:17,670,542-17,674,451 | + | C1H1g07483 | CX1g005291 | LOC_Os01g34480 | Os01g0528800 | - | Detail |
| C2H1g18703 | 1:17,680,683-17,681,510 | + | C1H1g28876 | CX1g001971 | LOC_Os10g41640 | Os01g0882200 | - | Detail |
| C2H1g14328 | 1:17,743,444-17,747,974 | + | C1H1g30939 | CX1g007129 | LOC_Os01g34610 | Os01g0530300 | - | Detail |
| C2H1g24993 | 1:17,749,795-17,750,411 | + | C1H1g00833 | - | - | Os01g0530341 | - | Detail |
| C2H1g24220 | 1:17,750,861-17,753,176 | + | C1H1g19948 | CX5g040030 | LOC_Os01g34614 | Os01g0530366 | - | Detail |
| C2H1g14488 | 1:17,756,204-17,758,500 | + | C1H1g13045 | CX1g002051 | LOC_Os01g34620 | Os01g0530400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025536 | 3:3,089,891-3,090,322 | + | C1H3g17647 | C2H3g07914 | - | Os03g0165375 | - | Detail |
| CX3g028153 | 3:3,094,040-3,099,496 | - | C1H3g30263 | C2H3g24716 | LOC_Os03g06940 | Os03g0165400 | - | Detail |
| CX3g025565 | 3:3,102,216-3,102,377 | + | - | - | - | - | - | Detail |
| CX3g027771 | 3:3,108,735-3,119,266 | - | C1H3g12191 | C2H3g14394 | LOC_Os03g06950 | Os03g0165600 | - | Detail |
| CX3g030842 | 3:3,120,809-3,122,893 | + | C1H3g13896 | C2H3g15746 | LOC_Os03g06960 | Os03g0165800 | - | Detail |
| CX3g028104 | 3:3,124,556-3,127,327 | - | C1H3g22228 | C2H3g22818 | LOC_Os03g06970 | Os03g0165900 | - | Detail |
| CX3g026438 | 3:3,131,842-3,132,278 | - | C1H3g06157 | C2H3g11279 | - | - | - | Detail |
| CX3g028480 | 3:3,132,584-3,134,131 | - | C1H3g06157 | C2H3g11279 | LOC_Os03g06980 | Os03g0166000 | - | Detail |
| CX3g025523 | 3:3,136,475-3,138,608 | + | C1H3g11602 | C2H3g30212 | LOC_Os03g07000 | Os03g0166100 | - | Detail |
| CX3g027208 | 3:3,139,331-3,141,213 | + | C1H3g09271 | C2H3g23098 | LOC_Os03g07000 | Os03g0166200 | - | Detail |
| CX3g027399 | 3:3,141,680-3,145,454 | - | C1H3g01458 | C2H3g15876 | LOC_Os03g07060 | Os03g0166600 | - | Detail |
| CX3g030094 | 3:3,152,829-3,157,188 | + | C1H3g04033 | C2H3g12538 | LOC_Os03g07080 | Os03g0166800 | - | Detail |
| CX3g030196 | 3:3,160,634-3,162,163 | + | C1H3g18965 | C2H3g19555 | LOC_Os03g07100 | Os03g0167000 | - | Detail |
| CX3g025455 | 3:3,164,885-3,167,759 | - | C1H3g05997 | C2H3g27991 | LOC_Os03g07110 | Os03g0167200 | OsIQM2 | Detail |
| CX3g027989 | 3:3,172,070-3,175,966 | + | C1H3g25407 | C2H3g02351 | LOC_Os03g07120 | Os03g0167400 | - | Detail |
| CX3g026239 | 3:3,178,065-3,185,966 | + | C1H3g07433 | C2H3g10661 | LOC_Os03g07130 | Os03g0167500 | OsRMR3, OsRMR1, RMR1 | Detail |
| CX3g025251 | 3:3,188,680-3,191,585 | + | C1H3g28690 | C2H3g14503 | LOC_Os03g07140 | Os03g0167600 | DPW | Detail |
| CX3g025657 | 3:3,192,408-3,196,325 | - | C1H3g18783 | C2H3g13249 | LOC_Os03g07150 | Os03g0167700 | OsPP2A-5 | Detail |
| CX3g026055 | 3:3,198,689-3,202,714 | + | C1H3g01595 | C2H3g28397 | LOC_Os03g07160 | Os03g0167800 | - | Detail |
| CX3g029636 | 3:3,208,641-3,211,475 | + | C1H3g17186 | C2H3g21676 | LOC_Os03g07170 | Os03g0168000 | - | Detail |