| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g22599 | 1:19,230,132-19,232,501 | + | C2H1g20640 | CX1g002304 | LOC_Os01g37850 | Os01g0559300 | - | Detail |
| C1H1g25483 | 1:19,235,694-19,241,490 | + | C2H1g12740 | CX1g002284 | LOC_Os01g37870 | Os01g0559500 | WSL | Detail |
| C1H1g09753 | 1:19,256,974-19,261,840 | + | C2H1g20416 | CX1g001668 | LOC_Os01g37910 | Os01g0559600 | - | Detail |
| C1H1g31264 | 1:19,278,164-19,283,572 | - | C2H1g03829 | CX1g000591 | LOC_Os01g37960 | Os01g0560000 | - | Detail |
| C1H1g27095 | 1:19,288,407-19,291,592 | + | C2H1g09836 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C1H1g29224 | 1:19,295,469-19,296,303 | + | C2H1g01651 | CX1g005030 | LOC_Os01g37980 | Os01g0560200 | - | Detail |
| C1H1g31306 | 1:19,297,384-19,298,244 | - | C2H1g18000 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g05766 | 1:19,331,353-19,331,679 | - | C2H1g18173 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g01734 | 1:19,331,825-19,332,637 | - | C2H1g03153 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g13005 | 1:19,333,259-19,333,798 | + | C2H1g08899 | - | LOC_Os01g38130 | - | - | Detail |
| C1H1g14910 | 1:19,336,594-19,338,533 | + | C2H1g08899 | - | LOC_Os01g38140 | Os01g0562400 | - | Detail |
| C1H1g18853 | 1:19,340,896-19,343,206 | + | C2H1g08899 | - | LOC_Os01g38140 | Os01g0562400 | - | Detail |
| C1H1g17141 | 1:19,345,310-19,346,650 | - | C2H1g03153 | - | LOC_Os01g38120 | Os01g0562600 | - | Detail |
| C1H1g25180 | 1:19,351,335-19,352,938 | + | C2H1g24757 | CX1g001538 | LOC_Os01g38229 | Os01g0563000 | - | Detail |
| C1H1g26653 | 1:19,358,538-19,361,602 | - | C2H1g25581 | CX1g002676 | LOC_Os01g38480 | Os01g0565600 | - | Detail |
| C1H1g00748 | 1:19,361,641-19,364,455 | + | C2H1g27995 | CX1g004835 | LOC_Os01g42520 | Os01g0611000 | - | Detail |
| C1H1g23185 | 1:19,362,222-19,362,722 | - | - | CX1g007049 | LOC_Os01g38490 | Os01g0565650 | - | Detail |
| C1H1g06422 | 1:19,365,602-19,367,307 | - | C2H1g19973 | CX1g003543 | LOC_Os01g38500 | Os01g0565800 | - | Detail |
| C1H1g16023 | 1:19,373,800-19,379,989 | - | C2H1g30274 | CX1g005683 | LOC_Os01g38530 | Os01g0566100 | OsELF3.2, ELF3_chr.1, OsELF3-2 | Detail |
| C1H1g13897 | 1:19,389,518-19,392,217 | - | C2H1g05106 | CX1g000412 | LOC_Os01g38580 | Os01g0566500 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025536 | 3:3,089,891-3,090,322 | + | C1H3g17647 | C2H3g07914 | - | Os03g0165375 | - | Detail |
| CX3g028153 | 3:3,094,040-3,099,496 | - | C1H3g30263 | C2H3g24716 | LOC_Os03g06940 | Os03g0165400 | - | Detail |
| CX3g025565 | 3:3,102,216-3,102,377 | + | - | - | - | - | - | Detail |
| CX3g027771 | 3:3,108,735-3,119,266 | - | C1H3g12191 | C2H3g14394 | LOC_Os03g06950 | Os03g0165600 | - | Detail |
| CX3g030842 | 3:3,120,809-3,122,893 | + | C1H3g13896 | C2H3g15746 | LOC_Os03g06960 | Os03g0165800 | - | Detail |
| CX3g028104 | 3:3,124,556-3,127,327 | - | C1H3g22228 | C2H3g22818 | LOC_Os03g06970 | Os03g0165900 | - | Detail |
| CX3g026438 | 3:3,131,842-3,132,278 | - | C1H3g06157 | C2H3g11279 | - | - | - | Detail |
| CX3g028480 | 3:3,132,584-3,134,131 | - | C1H3g06157 | C2H3g11279 | LOC_Os03g06980 | Os03g0166000 | - | Detail |
| CX3g025523 | 3:3,136,475-3,138,608 | + | C1H3g11602 | C2H3g30212 | LOC_Os03g07000 | Os03g0166100 | - | Detail |
| CX3g027208 | 3:3,139,331-3,141,213 | + | C1H3g09271 | C2H3g23098 | LOC_Os03g07000 | Os03g0166200 | - | Detail |
| CX3g027399 | 3:3,141,680-3,145,454 | - | C1H3g01458 | C2H3g15876 | LOC_Os03g07060 | Os03g0166600 | - | Detail |
| CX3g030094 | 3:3,152,829-3,157,188 | + | C1H3g04033 | C2H3g12538 | LOC_Os03g07080 | Os03g0166800 | - | Detail |
| CX3g030196 | 3:3,160,634-3,162,163 | + | C1H3g18965 | C2H3g19555 | LOC_Os03g07100 | Os03g0167000 | - | Detail |
| CX3g025455 | 3:3,164,885-3,167,759 | - | C1H3g05997 | C2H3g27991 | LOC_Os03g07110 | Os03g0167200 | OsIQM2 | Detail |
| CX3g027989 | 3:3,172,070-3,175,966 | + | C1H3g25407 | C2H3g02351 | LOC_Os03g07120 | Os03g0167400 | - | Detail |
| CX3g026239 | 3:3,178,065-3,185,966 | + | C1H3g07433 | C2H3g10661 | LOC_Os03g07130 | Os03g0167500 | OsRMR3, OsRMR1, RMR1 | Detail |
| CX3g025251 | 3:3,188,680-3,191,585 | + | C1H3g28690 | C2H3g14503 | LOC_Os03g07140 | Os03g0167600 | DPW | Detail |
| CX3g025657 | 3:3,192,408-3,196,325 | - | C1H3g18783 | C2H3g13249 | LOC_Os03g07150 | Os03g0167700 | OsPP2A-5 | Detail |
| CX3g026055 | 3:3,198,689-3,202,714 | + | C1H3g01595 | C2H3g28397 | LOC_Os03g07160 | Os03g0167800 | - | Detail |
| CX3g029636 | 3:3,208,641-3,211,475 | + | C1H3g17186 | C2H3g21676 | LOC_Os03g07170 | Os03g0168000 | - | Detail |