| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g02202 | 12:19,627,990-19,637,748 | + | C1H12g00437 | CX12g016737 | LOC_Os12g38380 | Os12g0571900 | - | Detail |
| C2H12g06609 | 12:19,638,436-19,643,581 | - | C1H12g23941 | CX12g017311 | LOC_Os12g38400 | Os12g0572000 | OsMYB91, OsRS2 | Detail |
| C2H12g27486 | 12:19,664,733-19,667,255 | - | C1H12g06117 | CX12g015286 | LOC_Os12g38430 | Os12g0572400 | - | Detail |
| C2H12g21889 | 12:19,670,881-19,675,207 | + | C1H12g07709 | CX12g015465 | LOC_Os12g38440 | Os12g0572500 | - | Detail |
| C2H12g24384 | 12:19,678,003-19,681,148 | + | C1H12g05641 | CX12g018435 | LOC_Os12g38440 | Os12g0572500 | - | Detail |
| C2H12g00949 | 12:19,683,338-19,684,939 | + | C1H12g27935 | CX12g018261 | LOC_Os12g38450 | Os12g0572700 | OsGT47A-VII | Detail |
| C2H12g28145 | 12:19,689,931-19,690,421 | - | C1H12g25184 | CX12g018183 | LOC_Os12g38460 | Os12g0572800 | MEL2 | Detail |
| C2H12g28556 | 12:19,691,609-19,695,066 | - | C1H12g23166 | CX12g018183 | LOC_Os12g38460 | Os12g0572800 | MEL2 | Detail |
| C2H12g13445 | 12:19,696,132-19,699,766 | - | - | - | LOC_Os12g38470 | - | - | Detail |
| C2H12g20492 | 12:19,701,775-19,703,805 | + | C1H12g11078 | CX12g018587 | LOC_Os12g38480 | Os12g0573000 | - | Detail |
| C2H12g06837 | 12:19,725,900-19,728,119 | + | C1H12g22011 | CX12g016564 | LOC_Os12g38490 | Os12g0573200 | - | Detail |
| C2H12g24752 | 12:19,746,326-19,746,514 | + | C1H12g16046 | CX12g015038 | - | Os12g0573600 | - | Detail |
| C2H12g11112 | 12:19,747,273-19,749,907 | + | C1H12g01638 | CX12g017446 | LOC_Os12g38560 | Os12g0573900 | - | Detail |
| C2H12g14541 | 12:19,763,026-19,766,322 | - | C1H12g01733 | CX12g018735 | LOC_Os12g38570 | Os12g0574000 | - | Detail |
| C2H12g18905 | 12:19,776,793-19,787,567 | + | - | - | LOC_Os12g38580 | - | - | Detail |
| C2H12g29399 | 12:19,788,577-19,790,649 | - | C1H12g22967 | CX12g016154 | LOC_Os12g38610 | Os12g0574700 | - | Detail |
| C2H12g29632 | 12:19,809,466-19,810,563 | - | C1H12g27164 | CX12g017251 | LOC_Os12g38620 | Os12g0574800 | - | Detail |
| C2H12g21362 | 12:19,811,148-19,816,033 | - | C1H12g15350 | CX12g018328 | LOC_Os12g38630 | Os12g0574900 | - | Detail |
| C2H12g24789 | 12:19,817,231-19,817,887 | - | C1H12g09502 | CX12g015885 | LOC_Os12g38640 | Os12g0575000 | - | Detail |
| C2H12g10258 | 12:19,822,749-19,823,057 | - | C1H12g19934 | CX12g017838 | LOC_Os12g38720 | Os12g0575400 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025797 | 3:2,929,761-2,930,476 | + | C1H6g31651 | - | - | - | - | Detail |
| CX3g025573 | 3:2,936,877-2,937,068 | - | - | - | - | - | - | Detail |
| CX3g030288 | 3:2,939,862-2,942,360 | + | C1H3g19807 | C2H3g18217 | LOC_Os03g06654 | Os03g0162000 | COW1, OsCOW1, oscow1, OsYUC8, NAL7, OsYUCCA8, FMO, OsFMO(t) | Detail |
| CX3g030521 | 3:2,953,333-2,953,903 | + | C1H3g07386 | C2H3g01853 | LOC_Os03g06670 | Os03g0162200 | - | Detail |
| CX3g025819 | 3:2,961,589-2,962,619 | + | C1H3g24759 | C2H3g21314 | LOC_Os03g06680 | Os03g0162500 | OsDUF50604 | Detail |
| CX3g029826 | 3:2,979,883-2,984,198 | + | C1H3g16348 | C2H3g14410 | LOC_Os03g06705 | Os03g0162800 | - | Detail |
| CX3g027686 | 3:2,985,600-2,988,071 | + | C1H3g16422 | C2H3g14053 | LOC_Os03g06710 | Os03g0162900 | - | Detail |
| CX3g025494 | 3:2,989,001-2,989,201 | + | - | - | - | - | - | Detail |
| CX3g025042 | 3:2,994,451-3,003,702 | + | C1H3g23541 | C2H3g06714 | LOC_Os03g06730 | Os03g0163200 | - | Detail |
| CX3g026090 | 3:3,004,672-3,008,463 | + | C1H3g17347 | C2H3g22693 | LOC_Os03g06740 | Os03g0163300 | - | Detail |
| CX3g029299 | 3:3,009,890-3,012,221 | - | C1H3g06657 | C2H3g01887 | LOC_Os03g06750 | Os03g0163400 | - | Detail |
| CX3g026455 | 3:3,013,684-3,016,050 | + | C1H3g03297 | C2H3g29355 | LOC_Os03g06760 | Os03g0163500 | - | Detail |
| CX3g031186 | 3:3,044,973-3,047,482 | + | C1H3g31538 | C2H3g08001 | LOC_Os03g06880 | Os03g0164700 | - | Detail |
| CX3g030325 | 3:3,048,908-3,051,263 | - | C1H3g13873 | C2H3g12377 | LOC_Os03g06890 | Os03g0164800 | - | Detail |
| CX3g029502 | 3:3,053,396-3,053,623 | + | C1H3g21506 | C2H3g23822 | - | Os03g0164901 | - | Detail |
| CX3g026349 | 3:3,057,705-3,067,629 | - | C1H3g29883 | C2H3g07393 | LOC_Os03g06900 | Os03g0165000 | TOP3α | Detail |
| CX3g030583 | 3:3,068,151-3,068,546 | + | - | - | - | Os03g0165050 | - | Detail |
| CX3g027841 | 3:3,070,246-3,072,192 | - | C1H3g17508 | C2H3g24120 | LOC_Os03g06910 | Os03g0165100 | - | Detail |
| CX3g027850 | 3:3,074,771-3,080,930 | + | C1H3g17985 | C2H3g12144 | LOC_Os03g06920 | Os03g0165266 | OsCHR730, CHR730 | Detail |
| CX3g028821 | 3:3,081,780-3,083,849 | - | C1H3g21677 | C2H3g20116 | LOC_Os03g06930 | Os03g0165300 | - | Detail |