| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H11g19141 | 11:21,708,432-21,712,038 | + | C1H11g11747 | CX11g012262 | LOC_Os11g41310 | Os11g0630900 | - | Detail |
| C2H11g15302 | 11:21,712,458-21,713,546 | + | C1H11g17163 | CX11g012262 | LOC_Os11g41300 | Os11g0631100 | - | Detail |
| C2H11g11254 | 11:21,727,708-21,728,058 | + | - | CX11g012226 | - | Os11g0631400 | - | Detail |
| C2H11g18866 | 11:21,776,134-21,776,817 | + | C1H11g17163 | CX11g012336 | LOC_Os11g41360 | Os11g0631600 | - | Detail |
| C2H11g26725 | 11:21,863,191-21,864,462 | + | C1H11g22934 | CX11g012990 | LOC_Os11g41520 | - | - | Detail |
| C2H11g11318 | 11:21,866,928-21,867,377 | + | C1H11g13465 | - | - | - | - | Detail |
| C2H11g17964 | 11:21,876,444-21,880,152 | + | C1H11g06726 | CX11g013896 | LOC_Os11g41540 | Os11g0633500 | - | Detail |
| C2H11g14039 | 11:21,921,303-21,924,300 | + | C1H11g07074 | CX11g014463 | LOC_Os11g41560 | Os11g0633800 | - | Detail |
| C2H11g19365 | 11:21,935,515-21,936,222 | - | C1H11g07987 | CX11g014424 | LOC_Os11g41600 | Os11g0634200 | - | Detail |
| C2H11g05228 | 11:21,956,143-21,957,441 | + | C1H11g31625 | CX3g025341 | LOC_Os11g41610 | Os11g0634500 | - | Detail |
| C2H11g13349 | 11:21,960,577-21,962,027 | + | C1H11g23097 | CX11g013196 | LOC_Os11g41640 | Os11g0634700 | - | Detail |
| C2H11g25208 | 11:21,967,430-21,971,642 | + | C1H11g30380 | CX11g014682 | LOC_Os11g41650 | Os11g0634800 | - | Detail |
| C2H11g14348 | 11:21,974,827-21,975,173 | - | - | CX11g011619 | LOC_Os11g37400 | - | - | Detail |
| C2H11g20587 | 11:21,975,320-21,975,502 | - | - | - | - | - | - | Detail |
| C2H11g03557 | 11:22,001,826-22,003,580 | + | C1H11g04984 | CX11g012635 | LOC_Os11g41710 | Os11g0635500 | - | Detail |
| C2H11g02195 | 11:22,052,795-22,053,172 | - | - | - | - | - | - | Detail |
| C2H11g26569 | 11:22,087,776-22,093,038 | - | C1H11g23330 | CX11g011597 | LOC_Os11g41820 | Os11g0636900 | OsU2AF65A | Detail |
| C2H11g12954 | 11:22,093,941-22,095,482 | - | C1H11g07280 | CX11g014805 | LOC_Os11g41840 | Os11g0637100 | OsPLT11 | Detail |
| C2H11g05836 | 11:22,100,520-22,102,138 | - | C1H11g20750 | CX11g012689 | LOC_Os11g41840 | Os11g0637100 | OsPLT11 | Detail |
| C2H11g26057 | 11:22,106,972-22,108,610 | - | C1H11g07280 | CX11g014397 | LOC_Os11g41850 | Os11g0637200 | OsPLT12 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025797 | 3:2,929,761-2,930,476 | + | C1H6g31651 | - | - | - | - | Detail |
| CX3g025573 | 3:2,936,877-2,937,068 | - | - | - | - | - | - | Detail |
| CX3g030288 | 3:2,939,862-2,942,360 | + | C1H3g19807 | C2H3g18217 | LOC_Os03g06654 | Os03g0162000 | COW1, OsCOW1, oscow1, OsYUC8, NAL7, OsYUCCA8, FMO, OsFMO(t) | Detail |
| CX3g030521 | 3:2,953,333-2,953,903 | + | C1H3g07386 | C2H3g01853 | LOC_Os03g06670 | Os03g0162200 | - | Detail |
| CX3g025819 | 3:2,961,589-2,962,619 | + | C1H3g24759 | C2H3g21314 | LOC_Os03g06680 | Os03g0162500 | OsDUF50604 | Detail |
| CX3g029826 | 3:2,979,883-2,984,198 | + | C1H3g16348 | C2H3g14410 | LOC_Os03g06705 | Os03g0162800 | - | Detail |
| CX3g027686 | 3:2,985,600-2,988,071 | + | C1H3g16422 | C2H3g14053 | LOC_Os03g06710 | Os03g0162900 | - | Detail |
| CX3g025494 | 3:2,989,001-2,989,201 | + | - | - | - | - | - | Detail |
| CX3g025042 | 3:2,994,451-3,003,702 | + | C1H3g23541 | C2H3g06714 | LOC_Os03g06730 | Os03g0163200 | - | Detail |
| CX3g026090 | 3:3,004,672-3,008,463 | + | C1H3g17347 | C2H3g22693 | LOC_Os03g06740 | Os03g0163300 | - | Detail |
| CX3g029299 | 3:3,009,890-3,012,221 | - | C1H3g06657 | C2H3g01887 | LOC_Os03g06750 | Os03g0163400 | - | Detail |
| CX3g026455 | 3:3,013,684-3,016,050 | + | C1H3g03297 | C2H3g29355 | LOC_Os03g06760 | Os03g0163500 | - | Detail |
| CX3g031186 | 3:3,044,973-3,047,482 | + | C1H3g31538 | C2H3g08001 | LOC_Os03g06880 | Os03g0164700 | - | Detail |
| CX3g030325 | 3:3,048,908-3,051,263 | - | C1H3g13873 | C2H3g12377 | LOC_Os03g06890 | Os03g0164800 | - | Detail |
| CX3g029502 | 3:3,053,396-3,053,623 | + | C1H3g21506 | C2H3g23822 | - | Os03g0164901 | - | Detail |
| CX3g026349 | 3:3,057,705-3,067,629 | - | C1H3g29883 | C2H3g07393 | LOC_Os03g06900 | Os03g0165000 | TOP3α | Detail |
| CX3g030583 | 3:3,068,151-3,068,546 | + | - | - | - | Os03g0165050 | - | Detail |
| CX3g027841 | 3:3,070,246-3,072,192 | - | C1H3g17508 | C2H3g24120 | LOC_Os03g06910 | Os03g0165100 | - | Detail |
| CX3g027850 | 3:3,074,771-3,080,930 | + | C1H3g17985 | C2H3g12144 | LOC_Os03g06920 | Os03g0165266 | OsCHR730, CHR730 | Detail |
| CX3g028821 | 3:3,081,780-3,083,849 | - | C1H3g21677 | C2H3g20116 | LOC_Os03g06930 | Os03g0165300 | - | Detail |