| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g02565 | 5:24,043,936-24,046,192 | - | C2H5g01309 | CX5g040689 | LOC_Os05g51060 | Os05g0588200 | OsPTD1 | Detail |
| C1H5g03972 | 5:24,048,990-24,053,630 | + | C2H5g01521 | CX5g037056 | LOC_Os05g51070 | Os05g0588300 | - | Detail |
| C1H5g19495 | 5:24,056,002-24,057,337 | - | C2H5g15276 | CX5g038358 | LOC_Os05g51090 | Os05g0588500 | SWEET5, OsSWEET5 | Detail |
| C1H5g16076 | 5:24,059,924-24,060,441 | - | C2H5g28115 | - | - | - | - | Detail |
| C1H5g07091 | 5:24,065,052-24,071,513 | - | C2H5g12592 | CX5g037152 | LOC_Os05g51110 | Os05g0588700 | - | Detail |
| C1H5g04606 | 5:24,072,271-24,080,627 | + | C2H5g14806 | - | - | Os01g0605000 | - | Detail |
| C1H5g21708 | 5:24,074,222-24,076,122 | - | C2H5g18087 | CX5g037008 | LOC_Os05g51130 | Os05g0588850 | - | Detail |
| C1H5g29117 | 5:24,077,661-24,079,232 | - | C2H5g11157 | CX5g037581 | LOC_Os05g51130 | Os05g0588900 | - | Detail |
| C1H5g25345 | 5:24,082,338-24,085,761 | + | C2H5g00751 | CX5g037769 | LOC_Os05g51140 | Os05g0589000 | - | Detail |
| C1H5g16036 | 5:24,086,718-24,089,405 | + | C2H5g06581 | CX5g039079 | LOC_Os05g51150 | Os05g0589200 | - | Detail |
| C1H5g14286 | 5:24,091,507-24,092,488 | - | C2H5g10509 | CX5g039463 | LOC_Os05g51160 | Os05g0589400 | - | Detail |
| C1H5g11554 | 5:24,094,058-24,097,313 | + | C2H5g25842 | CX5g037667 | LOC_Os05g51180 | Os05g0589600 | - | Detail |
| C1H5g06374 | 5:24,098,512-24,108,328 | - | C2H5g18573 | CX5g037718 | LOC_Os05g51190 | Os05g0589700 | - | Detail |
| C1H5g25711 | 5:24,123,804-24,125,255 | - | C2H5g15682 | CX5g040079 | LOC_Os05g51220 | Os05g0590000 | - | Detail |
| C1H5g15774 | 5:24,126,238-24,128,074 | + | C2H5g27742 | CX5g040435 | LOC_Os05g51230 | Os05g0590100 | - | Detail |
| C1H5g25595 | 5:24,130,507-24,130,941 | - | C2H5g27114 | CX5g040181 | LOC_Os05g51240 | Os05g0590300 | D14L2a | Detail |
| C1H5g28593 | 5:24,131,870-24,132,322 | - | C2H5g27114 | CX5g040181 | LOC_Os05g51240 | Os05g0590300 | D14L2a | Detail |
| C1H5g16193 | 5:24,139,498-24,140,788 | + | C2H5g10959 | CX5g039719 | LOC_Os05g51360 | Os05g0591400 | OsEBS | Detail |
| C1H5g00184 | 5:24,146,710-24,150,805 | + | C2H5g16340 | CX5g037625 | LOC_Os05g51390 | Os05g0591600 | LOGL8 | Detail |
| C1H5g07610 | 5:24,155,826-24,160,765 | + | C2H5g03812 | CX5g037154 | LOC_Os05g51400 | Os05g0591800 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025797 | 3:2,929,761-2,930,476 | + | C1H6g31651 | - | - | - | - | Detail |
| CX3g025573 | 3:2,936,877-2,937,068 | - | - | - | - | - | - | Detail |
| CX3g030288 | 3:2,939,862-2,942,360 | + | C1H3g19807 | C2H3g18217 | LOC_Os03g06654 | Os03g0162000 | COW1, OsCOW1, oscow1, OsYUC8, NAL7, OsYUCCA8, FMO, OsFMO(t) | Detail |
| CX3g030521 | 3:2,953,333-2,953,903 | + | C1H3g07386 | C2H3g01853 | LOC_Os03g06670 | Os03g0162200 | - | Detail |
| CX3g025819 | 3:2,961,589-2,962,619 | + | C1H3g24759 | C2H3g21314 | LOC_Os03g06680 | Os03g0162500 | OsDUF50604 | Detail |
| CX3g029826 | 3:2,979,883-2,984,198 | + | C1H3g16348 | C2H3g14410 | LOC_Os03g06705 | Os03g0162800 | - | Detail |
| CX3g027686 | 3:2,985,600-2,988,071 | + | C1H3g16422 | C2H3g14053 | LOC_Os03g06710 | Os03g0162900 | - | Detail |
| CX3g025494 | 3:2,989,001-2,989,201 | + | - | - | - | - | - | Detail |
| CX3g025042 | 3:2,994,451-3,003,702 | + | C1H3g23541 | C2H3g06714 | LOC_Os03g06730 | Os03g0163200 | - | Detail |
| CX3g026090 | 3:3,004,672-3,008,463 | + | C1H3g17347 | C2H3g22693 | LOC_Os03g06740 | Os03g0163300 | - | Detail |
| CX3g029299 | 3:3,009,890-3,012,221 | - | C1H3g06657 | C2H3g01887 | LOC_Os03g06750 | Os03g0163400 | - | Detail |
| CX3g026455 | 3:3,013,684-3,016,050 | + | C1H3g03297 | C2H3g29355 | LOC_Os03g06760 | Os03g0163500 | - | Detail |
| CX3g031186 | 3:3,044,973-3,047,482 | + | C1H3g31538 | C2H3g08001 | LOC_Os03g06880 | Os03g0164700 | - | Detail |
| CX3g030325 | 3:3,048,908-3,051,263 | - | C1H3g13873 | C2H3g12377 | LOC_Os03g06890 | Os03g0164800 | - | Detail |
| CX3g029502 | 3:3,053,396-3,053,623 | + | C1H3g21506 | C2H3g23822 | - | Os03g0164901 | - | Detail |
| CX3g026349 | 3:3,057,705-3,067,629 | - | C1H3g29883 | C2H3g07393 | LOC_Os03g06900 | Os03g0165000 | TOP3α | Detail |
| CX3g030583 | 3:3,068,151-3,068,546 | + | - | - | - | Os03g0165050 | - | Detail |
| CX3g027841 | 3:3,070,246-3,072,192 | - | C1H3g17508 | C2H3g24120 | LOC_Os03g06910 | Os03g0165100 | - | Detail |
| CX3g027850 | 3:3,074,771-3,080,930 | + | C1H3g17985 | C2H3g12144 | LOC_Os03g06920 | Os03g0165266 | OsCHR730, CHR730 | Detail |
| CX3g028821 | 3:3,081,780-3,083,849 | - | C1H3g21677 | C2H3g20116 | LOC_Os03g06930 | Os03g0165300 | - | Detail |