| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H12g10172 | 12:19,200,857-19,204,980 | + | C1H12g01189 | CX12g015184 | LOC_Os12g37580 | Os12g0562700 | - | Detail |
| C2H12g04554 | 12:19,208,147-19,212,347 | + | C1H12g29271 | CX12g018698 | LOC_Os12g37590 | Os12g0562900 | - | Detail |
| C2H12g28745 | 12:19,219,233-19,221,945 | + | C1H12g07191 | CX12g018166 | LOC_Os12g37600 | Os12g0563000 | - | Detail |
| C2H12g22646 | 12:19,224,442-19,226,906 | - | C1H12g26460 | CX12g016722 | LOC_Os12g37610 | Os12g0563200 | TCD11 | Detail |
| C2H12g16734 | 12:19,228,165-19,231,317 | + | C1H12g16775 | CX12g015930 | LOC_Os12g37630 | Os12g0563400 | - | Detail |
| C2H12g16167 | 12:19,231,843-19,237,219 | + | C1H12g19468 | CX12g017340 | LOC_Os12g37640 | Os12g0563500 | - | Detail |
| C2H12g28870 | 12:19,241,144-19,241,758 | + | C1H12g18856 | CX12g016515 | LOC_Os12g37650 | Os12g0563600 | - | Detail |
| C2H12g06156 | 12:19,244,583-19,248,050 | - | C1H12g14071 | CX12g015374 | LOC_Os12g37660 | Os12g0563700 | - | Detail |
| C2H12g24685 | 12:19,255,944-19,257,812 | - | C1H12g07476 | CX12g017390 | LOC_Os12g37690 | Os12g0564100 | Os2R_MYB97 | Detail |
| C2H12g09945 | 12:19,270,957-19,273,588 | + | C1H12g22539 | CX12g015794 | LOC_Os12g37710 | Os12g0564400 | - | Detail |
| C2H12g27883 | 12:19,273,848-19,282,916 | - | C1H12g20500 | CX12g016927 | LOC_Os12g37720 | Os12g0564600 | - | Detail |
| C2H12g03379 | 12:19,284,956-19,288,045 | - | C1H12g04508 | CX12g016233 | LOC_Os12g37740 | Os12g0564800 | Pijx | Detail |
| C2H12g21743 | 12:19,288,394-19,294,971 | - | C1H12g03020 | CX12g017177 | LOC_Os12g37740 | Os12g0564800 | Pijx | Detail |
| C2H12g07047 | 12:19,296,423-19,296,750 | - | - | - | - | - | - | Detail |
| C2H12g03104 | 12:19,296,876-19,297,061 | - | C1H12g20951 | - | - | - | - | Detail |
| C2H12g05639 | 12:19,297,314-19,298,359 | + | C1H12g08134 | CX12g017162 | LOC_Os12g37750 | Os12g0565000 | - | Detail |
| C2H12g05838 | 12:19,298,394-19,299,734 | + | C1H12g19073 | CX12g017162 | LOC_Os12g37750 | Os12g0589400 | HSA1a, HSA1a-j | Detail |
| C2H12g00801 | 12:19,312,775-19,316,104 | + | C1H12g23639 | CX12g017607 | LOC_Os12g37770 | Os12g0565200 | - | Detail |
| C2H12g17933 | 12:19,316,614-19,320,900 | - | C1H12g05537 | CX12g016058 | LOC_Os12g37780 | Os12g0565300 | - | Detail |
| C2H12g20757 | 12:19,354,323-19,359,099 | + | C1H12g19479 | CX12g016748 | LOC_Os12g37840 | Os12g0566000 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025627 | 3:2,799,801-2,800,274 | - | C1H3g26257 | C2H3g24140 | LOC_Os03g06390 | Os03g0159900 | - | Detail |
| CX3g029121 | 3:2,802,398-2,802,556 | + | - | - | - | - | - | Detail |
| CX3g025658 | 3:2,804,691-2,810,998 | + | C1H3g14921 | C2H3g08821 | LOC_Os03g06410 | Os03g0160100 | ACDR1, SPL3, OsEDR1, OsACDR1, EDR1 | Detail |
| CX3g028864 | 3:2,812,778-2,813,338 | + | C1H10g04845 | - | LOC_Os03g06420 | Os03g0160200 | - | Detail |
| CX3g027015 | 3:2,815,906-2,816,199 | - | C1H3g16143 | C2H3g01208 | LOC_Os03g06430 | Os03g0160300 | - | Detail |
| CX3g030159 | 3:2,819,263-2,822,440 | - | C1H3g24862 | C2H3g27894 | LOC_Os03g06440 | Os03g0160400 | OsDNA2_8 | Detail |
| CX3g027024 | 3:2,832,276-2,835,320 | - | C1H3g27076 | C2H3g10921 | LOC_Os03g06460 | Os03g0160600 | - | Detail |
| CX3g031001 | 3:2,843,435-2,844,043 | - | C1H3g12946 | C2H3g17145 | LOC_Os03g06480 | Os03g0160900 | - | Detail |
| CX3g025715 | 3:2,854,108-2,857,197 | + | C1H3g27407 | C2H3g23882 | - | - | - | Detail |
| CX3g027922 | 3:2,862,127-2,870,160 | + | C1H3g11682 | C2H3g05410 | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| CX3g029615 | 3:2,871,187-2,876,200 | - | C1H3g12948 | C2H3g11481 | LOC_Os03g06520 | Os03g0161200 | - | Detail |
| CX3g030950 | 3:2,881,702-2,881,875 | - | - | - | - | - | - | Detail |
| CX3g031150 | 3:2,888,115-2,890,003 | + | C1H3g19950 | C2H3g04338 | LOC_Os03g06570 | Os03g0161400 | - | Detail |
| CX3g029485 | 3:2,897,946-2,900,238 | + | C1H3g16884 | C2H3g04897 | LOC_Os03g06580 | Os03g0161500 | - | Detail |
| CX3g025939 | 3:2,905,375-2,905,524 | + | - | - | - | - | - | Detail |
| CX3g029738 | 3:2,905,701-2,906,162 | - | C1H3g31680 | C2H3g20671 | LOC_Os03g06610 | Os03g0161600 | OsEPFL6 | Detail |
| CX3g026348 | 3:2,910,519-2,910,761 | - | - | - | - | - | - | Detail |
| CX3g031187 | 3:2,914,365-2,914,532 | + | - | - | - | - | - | Detail |
| CX3g029835 | 3:2,921,953-2,924,128 | + | C1H3g19723 | C2H3g16543 | LOC_Os03g06620 | Os03g0161800 | - | Detail |
| CX3g029527 | 3:2,925,685-2,927,899 | + | C1H3g17239 | C2H3g18983 | LOC_Os03g06630 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |