| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H1g02341 | 1:19,552-27,397 | + | C2H1g13015 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C1H1g23301 | 1:34,909-38,077 | + | C2H1g25732 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C1H1g05541 | 1:38,658-42,693 | + | C2H1g24136 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C1H1g18141 | 1:45,137-49,100 | + | C2H1g01770 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C1H1g06702 | 1:49,316-50,669 | + | C2H1g21686 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C1H1g15122 | 1:53,886-58,091 | + | C2H1g03140 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C1H1g26676 | 1:58,983-64,706 | + | C2H1g12741 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C1H1g29605 | 1:68,013-72,703 | + | C2H1g30020 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C1H1g15874 | 1:72,685-75,717 | - | C2H1g01369 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C1H1g31238 | 1:79,440-86,394 | + | C2H1g16597 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C1H1g30351 | 1:88,972-90,382 | + | C2H1g26722 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C1H1g07147 | 1:93,453-96,885 | + | C2H1g16862 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C1H1g23624 | 1:103,904-104,966 | + | C2H1g21224 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C1H1g19237 | 1:106,332-109,626 | + | C2H1g12981 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C1H1g02228 | 1:110,056-112,714 | + | C2H1g13148 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C1H1g19000 | 1:113,782-115,921 | + | C2H1g25133 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| C1H1g20467 | 1:116,248-118,728 | + | C2H1g01047 | CX1g001371 | LOC_Os01g01307 | Os01g0102700 | - | Detail |
| C1H1g21121 | 1:119,474-124,658 | + | C2H1g05282 | CX1g006904 | LOC_Os01g01312 | Os01g0102800 | OsCHR704, CHR704 | Detail |
| C1H1g31375 | 1:129,470-130,340 | - | C2H1g27348 | CX1g001497 | LOC_Os01g01340 | Os01g0102900 | LIR1, Lir1 | Detail |
| C1H1g31418 | 1:131,158-133,161 | - | C2H1g25360 | CX1g000859 | LOC_Os01g01350 | Os01g0103000 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H9g04794 | 9:8,951,584-8,954,311 | + | - | - | - | - | - | Detail |
| C2H9g27468 | 9:8,959,803-8,973,322 | + | C1H9g29897 | CX9g056988 | LOC_Os09g13630 | Os09g0306800 | OsEMF2b, GW9 | Detail |
| C2H9g03889 | 9:8,973,550-8,984,843 | - | C1H9g24374 | CX9g055423 | LOC_Os09g13610 | Os09g0306700 | OsMED25 | Detail |
| C2H9g13122 | 9:8,990,712-8,991,824 | + | C1H9g15362 | CX9g055847 | LOC_Os09g13600 | Os09g0306650 | - | Detail |
| C2H9g24132 | 9:9,005,264-9,006,092 | + | C1H9g18580 | CX9g055714 | LOC_Os09g13590 | Os09g0306500 | - | Detail |
| C2H9g15762 | 9:9,019,668-9,020,552 | - | C1H9g10670 | CX9g056842 | LOC_Os09g13570 | Os09g0306400 | BZIP71, OsbZIP71 | Detail |
| C2H9g08842 | 9:9,068,812-9,070,693 | - | C1H9g20244 | CX9g056900 | LOC_Os09g13410 | Os09g0304500 | - | Detail |
| C2H9g17219 | 9:9,083,715-9,084,786 | + | C1H9g28431 | CX9g057256 | LOC_Os09g13400 | Os09g0304400 | - | Detail |
| C2H9g18256 | 9:9,182,231-9,184,818 | - | - | CX9g055680 | - | - | - | Detail |
| C2H9g11105 | 9:9,231,055-9,231,475 | - | C1H11g23968 | CX9g057602 | LOC_Os10g01790 | - | - | Detail |
| C2H9g03639 | 9:9,238,197-9,246,446 | + | C1H9g22439 | CX9g056299 | LOC_Os09g17730 | Os09g0346400 | - | Detail |
| C2H9g03060 | 9:9,248,065-9,248,859 | + | C1H9g04697 | CX9g055763 | LOC_Os09g17740 | Os09g0346500 | CAB1R | Detail |
| C2H9g12579 | 9:9,252,468-9,255,425 | - | C1H9g02390 | CX9g056958 | LOC_Os09g17750 | Os09g0346600 | - | Detail |
| C2H9g29631 | 9:9,267,689-9,273,756 | - | C1H9g13223 | CX9g055122 | LOC_Os09g17760 | Os09g0346700 | - | Detail |
| C2H9g05792 | 9:9,283,857-9,287,569 | - | C1H9g09773 | CX9g054886 | LOC_Os09g17770 | Os09g0346900 | - | Detail |
| C2H9g20306 | 9:9,303,138-9,304,937 | + | C1H9g19359 | CX9g055922 | LOC_Os09g17810 | Os09g0347300 | - | Detail |
| C2H9g20367 | 9:9,311,420-9,315,390 | - | C1H9g27802 | CX9g057025 | LOC_Os09g17840 | Os09g0347700 | - | Detail |
| C2H9g15118 | 9:9,321,591-9,325,715 | - | C1H9g27802 | CX9g054842 | LOC_Os09g17840 | Os09g0347700 | - | Detail |
| C2H9g01207 | 9:9,325,450-9,325,632 | + | - | - | - | - | - | Detail |
| C2H9g23264 | 9:9,331,861-9,336,091 | + | C1H9g13400 | CX9g055178 | LOC_Os09g17850 | Os09g0347800 | HAT1, HAG704, OsHAG704 | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025627 | 3:2,799,801-2,800,274 | - | C1H3g26257 | C2H3g24140 | LOC_Os03g06390 | Os03g0159900 | - | Detail |
| CX3g029121 | 3:2,802,398-2,802,556 | + | - | - | - | - | - | Detail |
| CX3g025658 | 3:2,804,691-2,810,998 | + | C1H3g14921 | C2H3g08821 | LOC_Os03g06410 | Os03g0160100 | ACDR1, SPL3, OsEDR1, OsACDR1, EDR1 | Detail |
| CX3g028864 | 3:2,812,778-2,813,338 | + | C1H10g04845 | - | LOC_Os03g06420 | Os03g0160200 | - | Detail |
| CX3g027015 | 3:2,815,906-2,816,199 | - | C1H3g16143 | C2H3g01208 | LOC_Os03g06430 | Os03g0160300 | - | Detail |
| CX3g030159 | 3:2,819,263-2,822,440 | - | C1H3g24862 | C2H3g27894 | LOC_Os03g06440 | Os03g0160400 | OsDNA2_8 | Detail |
| CX3g027024 | 3:2,832,276-2,835,320 | - | C1H3g27076 | C2H3g10921 | LOC_Os03g06460 | Os03g0160600 | - | Detail |
| CX3g031001 | 3:2,843,435-2,844,043 | - | C1H3g12946 | C2H3g17145 | LOC_Os03g06480 | Os03g0160900 | - | Detail |
| CX3g025715 | 3:2,854,108-2,857,197 | + | C1H3g27407 | C2H3g23882 | - | - | - | Detail |
| CX3g027922 | 3:2,862,127-2,870,160 | + | C1H3g11682 | C2H3g05410 | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| CX3g029615 | 3:2,871,187-2,876,200 | - | C1H3g12948 | C2H3g11481 | LOC_Os03g06520 | Os03g0161200 | - | Detail |
| CX3g030950 | 3:2,881,702-2,881,875 | - | - | - | - | - | - | Detail |
| CX3g031150 | 3:2,888,115-2,890,003 | + | C1H3g19950 | C2H3g04338 | LOC_Os03g06570 | Os03g0161400 | - | Detail |
| CX3g029485 | 3:2,897,946-2,900,238 | + | C1H3g16884 | C2H3g04897 | LOC_Os03g06580 | Os03g0161500 | - | Detail |
| CX3g025939 | 3:2,905,375-2,905,524 | + | - | - | - | - | - | Detail |
| CX3g029738 | 3:2,905,701-2,906,162 | - | C1H3g31680 | C2H3g20671 | LOC_Os03g06610 | Os03g0161600 | OsEPFL6 | Detail |
| CX3g026348 | 3:2,910,519-2,910,761 | - | - | - | - | - | - | Detail |
| CX3g031187 | 3:2,914,365-2,914,532 | + | - | - | - | - | - | Detail |
| CX3g029835 | 3:2,921,953-2,924,128 | + | C1H3g19723 | C2H3g16543 | LOC_Os03g06620 | Os03g0161800 | - | Detail |
| CX3g029527 | 3:2,925,685-2,927,899 | + | C1H3g17239 | C2H3g18983 | LOC_Os03g06630 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |