| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H5g10477 | 5:22,813,098-22,815,157 | - | C2H5g04171 | CX5g040994 | LOC_Os05g48660 | Os05g0560300 | - | Detail |
| C1H5g07983 | 5:22,818,470-22,821,749 | + | C2H5g23278 | CX5g040506 | LOC_Os05g48670 | Os05g0560400 | - | Detail |
| C1H5g15622 | 5:22,822,305-22,822,648 | - | C2H5g11774 | CX5g041006 | LOC_Os05g48680 | Os05g0560500 | - | Detail |
| C1H5g18490 | 5:22,825,976-22,827,016 | + | C2H5g07077 | CX5g039073 | LOC_Os05g48690 | Os05g0560600 | - | Detail |
| C1H5g04118 | 5:22,837,972-22,839,523 | - | C2H5g25068 | CX5g037700 | LOC_Os05g48700 | Os05g0560900 | OsGA2ox8 | Detail |
| C1H5g06450 | 5:22,856,698-22,856,925 | + | C2H5g27839 | CX5g037256 | LOC_Os05g48740 | Os05g0561400 | - | Detail |
| C1H5g19616 | 5:22,857,390-22,860,653 | - | C2H5g17404 | CX5g036713 | LOC_Os05g48750 | Os05g0561500 | - | Detail |
| C1H5g06337 | 5:22,865,474-22,869,419 | + | C2H5g28708 | CX5g037464 | LOC_Os05g48760 | Os05g0561600 | - | Detail |
| C1H5g29811 | 5:22,872,035-22,875,241 | - | C2H5g03536 | CX5g040205 | LOC_Os05g48790 | Os05g0562000 | - | Detail |
| C1H5g21574 | 5:22,881,317-22,884,430 | - | C2H5g13005 | CX5g037282 | LOC_Os05g48800 | Os05g0562200 | - | Detail |
| C1H5g16970 | 5:22,886,823-22,888,665 | - | C2H5g02917 | CX5g038099 | LOC_Os05g48810 | Os05g0562300 | - | Detail |
| C1H5g24863 | 5:22,889,726-22,901,099 | - | C2H5g23462 | CX5g039085 | LOC_Os05g48820 | Os05g0562400 | - | Detail |
| C1H5g03290 | 5:22,902,783-22,903,505 | - | C2H5g25280 | CX5g039144 | LOC_Os05g48840 | Os05g0562800 | - | Detail |
| C1H5g00723 | 5:22,904,917-22,910,970 | + | C2H5g15924 | CX5g037795 | - | Os05g0489200 | - | Detail |
| C1H5g26594 | 5:22,918,549-22,919,788 | + | C2H5g28682 | CX5g037488 | LOC_Os05g48850 | Os05g0563000 | OsSND2 | Detail |
| C1H5g29749 | 5:22,920,174-22,927,417 | - | C2H5g09501 | CX5g039932 | LOC_Os05g48855 | Os05g0563050 | - | Detail |
| C1H5g10966 | 5:22,949,443-22,954,845 | + | C2H5g20802 | CX5g039766 | LOC_Os05g48870 | Os05g0563400 | - | Detail |
| C1H5g18281 | 5:22,953,645-22,954,447 | - | - | - | - | - | - | Detail |
| C1H5g01496 | 5:22,955,576-22,957,839 | - | C2H5g27189 | CX5g037148 | LOC_Os05g48880 | Os05g0563500 | OsMMS21 | Detail |
| C1H5g19054 | 5:22,961,687-22,962,421 | + | C2H5g22988 | CX5g036766 | LOC_Os05g48890 | Os05g0563550 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025627 | 3:2,799,801-2,800,274 | - | C1H3g26257 | C2H3g24140 | LOC_Os03g06390 | Os03g0159900 | - | Detail |
| CX3g029121 | 3:2,802,398-2,802,556 | + | - | - | - | - | - | Detail |
| CX3g025658 | 3:2,804,691-2,810,998 | + | C1H3g14921 | C2H3g08821 | LOC_Os03g06410 | Os03g0160100 | ACDR1, SPL3, OsEDR1, OsACDR1, EDR1 | Detail |
| CX3g028864 | 3:2,812,778-2,813,338 | + | C1H10g04845 | - | LOC_Os03g06420 | Os03g0160200 | - | Detail |
| CX3g027015 | 3:2,815,906-2,816,199 | - | C1H3g16143 | C2H3g01208 | LOC_Os03g06430 | Os03g0160300 | - | Detail |
| CX3g030159 | 3:2,819,263-2,822,440 | - | C1H3g24862 | C2H3g27894 | LOC_Os03g06440 | Os03g0160400 | OsDNA2_8 | Detail |
| CX3g027024 | 3:2,832,276-2,835,320 | - | C1H3g27076 | C2H3g10921 | LOC_Os03g06460 | Os03g0160600 | - | Detail |
| CX3g031001 | 3:2,843,435-2,844,043 | - | C1H3g12946 | C2H3g17145 | LOC_Os03g06480 | Os03g0160900 | - | Detail |
| CX3g025715 | 3:2,854,108-2,857,197 | + | C1H3g27407 | C2H3g23882 | - | - | - | Detail |
| CX3g027922 | 3:2,862,127-2,870,160 | + | C1H3g11682 | C2H3g05410 | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| CX3g029615 | 3:2,871,187-2,876,200 | - | C1H3g12948 | C2H3g11481 | LOC_Os03g06520 | Os03g0161200 | - | Detail |
| CX3g030950 | 3:2,881,702-2,881,875 | - | - | - | - | - | - | Detail |
| CX3g031150 | 3:2,888,115-2,890,003 | + | C1H3g19950 | C2H3g04338 | LOC_Os03g06570 | Os03g0161400 | - | Detail |
| CX3g029485 | 3:2,897,946-2,900,238 | + | C1H3g16884 | C2H3g04897 | LOC_Os03g06580 | Os03g0161500 | - | Detail |
| CX3g025939 | 3:2,905,375-2,905,524 | + | - | - | - | - | - | Detail |
| CX3g029738 | 3:2,905,701-2,906,162 | - | C1H3g31680 | C2H3g20671 | LOC_Os03g06610 | Os03g0161600 | OsEPFL6 | Detail |
| CX3g026348 | 3:2,910,519-2,910,761 | - | - | - | - | - | - | Detail |
| CX3g031187 | 3:2,914,365-2,914,532 | + | - | - | - | - | - | Detail |
| CX3g029835 | 3:2,921,953-2,924,128 | + | C1H3g19723 | C2H3g16543 | LOC_Os03g06620 | Os03g0161800 | - | Detail |
| CX3g029527 | 3:2,925,685-2,927,899 | + | C1H3g17239 | C2H3g18983 | LOC_Os03g06630 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |