| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g30720 | 2:26,402,932-26,407,801 | + | C2H2g26485 | CX2g020990 | LOC_Os02g46930 | Os02g0696700 | JMJ707 | Detail |
| C1H2g01605 | 2:26,415,504-26,420,657 | + | C2H2g08332 | CX2g022564 | LOC_Os02g46940 | Os02g0696900 | - | Detail |
| C1H2g00090 | 2:26,430,394-26,433,611 | + | C2H2g01904 | CX2g024745 | LOC_Os02g46956 | Os02g0697200 | - | Detail |
| C1H2g12534 | 2:26,434,689-26,438,540 | + | C2H2g16657 | CX2g022468 | LOC_Os02g46962 | Os02g0697300 | - | Detail |
| C1H2g06035 | 2:26,438,857-26,443,104 | - | C2H2g27000 | CX2g023465 | LOC_Os02g46970 | Os02g0697400 | 4CL2, Os4CL2 | Detail |
| C1H2g11528 | 2:26,444,687-26,446,925 | - | C2H2g05522 | CX2g020256 | LOC_Os02g46980 | Os02g0697500 | - | Detail |
| C1H2g31638 | 2:26,450,091-26,454,661 | + | C2H2g00397 | CX2g021170 | LOC_Os02g46990 | Os02g0697600 | - | Detail |
| C1H2g04653 | 2:26,455,536-26,456,909 | - | C2H2g14923 | CX2g022742 | LOC_Os02g47000 | Os02g0697700 | - | Detail |
| C1H2g09723 | 2:26,457,220-26,460,714 | + | C2H2g29054 | CX2g021805 | LOC_Os02g47010 | Os02g0697800 | - | Detail |
| C1H2g14448 | 2:26,462,176-26,464,591 | + | C2H2g27677 | CX2g024307 | LOC_Os02g47020 | Os02g0698000 | - | Detail |
| C1H2g18534 | 2:26,463,258-26,466,489 | - | C2H2g18315 | CX2g021243 | LOC_Os02g47030 | Os02g0698100 | - | Detail |
| C1H2g02655 | 2:26,481,625-26,485,711 | + | C2H2g18843 | CX2g024217 | LOC_Os02g47060 | Os02g0698800 | - | Detail |
| C1H2g03123 | 2:26,506,009-26,508,636 | + | C2H2g14858 | CX2g023002 | LOC_Os02g47090 | Os02g0699000 | OsNPF7.2 | Detail |
| C1H2g20162 | 2:26,513,273-26,516,054 | + | C2H2g19221 | CX2g021504 | LOC_Os02g47110 | Os02g0128600 | - | Detail |
| C1H2g00453 | 2:26,517,826-26,524,518 | + | C2H2g09814 | CX2g024335 | LOC_Os02g47120 | Os02g0699400 | RSH3c | Detail |
| C1H2g18165 | 2:26,526,303-26,529,683 | + | C2H2g10795 | CX2g024576 | LOC_Os02g47130 | Os02g0699500 | - | Detail |
| C1H2g01131 | 2:26,534,134-26,541,370 | - | C2H2g13651 | CX2g023323 | LOC_Os02g47150 | Os02g0699700 | - | Detail |
| C1H2g29663 | 2:26,548,710-26,554,847 | - | C2H2g14562 | - | - | - | - | Detail |
| C1H2g31566 | 2:26,556,058-26,560,028 | - | C2H2g29805 | CX2g020522 | LOC_Os02g47170 | Os02g0700000 | - | Detail |
| C1H2g13530 | 2:26,563,384-26,566,151 | + | C2H2g18839 | CX2g019762 | LOC_Os02g47180 | Os02g0700100 | CDC20.2 | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025627 | 3:2,799,801-2,800,274 | - | C1H3g26257 | C2H3g24140 | LOC_Os03g06390 | Os03g0159900 | - | Detail |
| CX3g029121 | 3:2,802,398-2,802,556 | + | - | - | - | - | - | Detail |
| CX3g025658 | 3:2,804,691-2,810,998 | + | C1H3g14921 | C2H3g08821 | LOC_Os03g06410 | Os03g0160100 | ACDR1, SPL3, OsEDR1, OsACDR1, EDR1 | Detail |
| CX3g028864 | 3:2,812,778-2,813,338 | + | C1H10g04845 | - | LOC_Os03g06420 | Os03g0160200 | - | Detail |
| CX3g027015 | 3:2,815,906-2,816,199 | - | C1H3g16143 | C2H3g01208 | LOC_Os03g06430 | Os03g0160300 | - | Detail |
| CX3g030159 | 3:2,819,263-2,822,440 | - | C1H3g24862 | C2H3g27894 | LOC_Os03g06440 | Os03g0160400 | OsDNA2_8 | Detail |
| CX3g027024 | 3:2,832,276-2,835,320 | - | C1H3g27076 | C2H3g10921 | LOC_Os03g06460 | Os03g0160600 | - | Detail |
| CX3g031001 | 3:2,843,435-2,844,043 | - | C1H3g12946 | C2H3g17145 | LOC_Os03g06480 | Os03g0160900 | - | Detail |
| CX3g025715 | 3:2,854,108-2,857,197 | + | C1H3g27407 | C2H3g23882 | - | - | - | Detail |
| CX3g027922 | 3:2,862,127-2,870,160 | + | C1H3g11682 | C2H3g05410 | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| CX3g029615 | 3:2,871,187-2,876,200 | - | C1H3g12948 | C2H3g11481 | LOC_Os03g06520 | Os03g0161200 | - | Detail |
| CX3g030950 | 3:2,881,702-2,881,875 | - | - | - | - | - | - | Detail |
| CX3g031150 | 3:2,888,115-2,890,003 | + | C1H3g19950 | C2H3g04338 | LOC_Os03g06570 | Os03g0161400 | - | Detail |
| CX3g029485 | 3:2,897,946-2,900,238 | + | C1H3g16884 | C2H3g04897 | LOC_Os03g06580 | Os03g0161500 | - | Detail |
| CX3g025939 | 3:2,905,375-2,905,524 | + | - | - | - | - | - | Detail |
| CX3g029738 | 3:2,905,701-2,906,162 | - | C1H3g31680 | C2H3g20671 | LOC_Os03g06610 | Os03g0161600 | OsEPFL6 | Detail |
| CX3g026348 | 3:2,910,519-2,910,761 | - | - | - | - | - | - | Detail |
| CX3g031187 | 3:2,914,365-2,914,532 | + | - | - | - | - | - | Detail |
| CX3g029835 | 3:2,921,953-2,924,128 | + | C1H3g19723 | C2H3g16543 | LOC_Os03g06620 | Os03g0161800 | - | Detail |
| CX3g029527 | 3:2,925,685-2,927,899 | + | C1H3g17239 | C2H3g18983 | LOC_Os03g06630 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |