| Hap1 ID | Location | Strand | Hap2 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C1H2g28106 | 2:21,089,805-21,096,265 | + | C2H2g01633 | CX2g024147 | LOC_Os02g37020 | Os02g0580700 | - | Detail |
| C1H2g10809 | 2:21,099,900-21,101,487 | - | C2H2g21116 | CX2g019822 | LOC_Os02g37030 | Os02g0580800 | - | Detail |
| C1H2g25296 | 2:21,104,890-21,105,807 | - | C2H2g10113 | CX2g023061 | LOC_Os02g48570 | Os02g0580900 | - | Detail |
| C1H2g19049 | 2:21,105,191-21,106,428 | + | C2H2g15521 | - | - | Os02g0580966 | - | Detail |
| C1H2g10875 | 2:21,107,659-21,108,797 | - | C2H2g13751 | CX2g023061 | LOC_Os02g46460 | Os02g0580900 | - | Detail |
| C1H2g25963 | 2:21,115,594-21,127,107 | + | C2H2g06434 | CX2g020588 | LOC_Os02g37050 | Os02g0581000 | - | Detail |
| C1H2g22542 | 2:21,127,597-21,129,105 | + | C2H2g26828 | CX2g024191 | LOC_Os02g37060 | Os02g0581100 | - | Detail |
| C1H2g09757 | 2:21,145,313-21,150,099 | - | C2H2g02302 | CX2g023339 | LOC_Os02g37080 | Os02g0581300 | - | Detail |
| C1H2g18622 | 2:21,152,943-21,166,087 | + | C2H2g09011 | CX2g021297 | LOC_Os02g37090 | Os02g0581500 | - | Detail |
| C1H2g23213 | 2:21,167,129-21,169,945 | + | C2H2g04808 | CX2g024215 | LOC_Os02g37100 | Os02g0581800 | - | Detail |
| C1H2g17777 | 2:21,171,770-21,173,528 | - | C2H2g03467 | CX2g023651 | LOC_Os02g37120 | Os02g0582100 | - | Detail |
| C1H2g12580 | 2:21,181,293-21,185,236 | - | C2H2g16849 | CX2g024746 | LOC_Os02g37130 | Os02g0582200 | - | Detail |
| C1H2g31329 | 2:21,189,778-21,193,918 | - | C2H2g08130 | CX2g021347 | LOC_Os02g37140 | Os02g0582300 | - | Detail |
| C1H2g02908 | 2:21,195,696-21,199,055 | - | C2H2g21420 | CX2g021347 | LOC_Os02g37150 | Os02g0582400 | - | Detail |
| C1H2g05984 | 2:21,203,906-21,205,012 | - | C2H2g23878 | CX2g019875 | LOC_Os02g37160 | Os02g0582600 | - | Detail |
| C1H2g17284 | 2:21,209,973-21,210,651 | - | C2H2g23878 | CX2g019875 | LOC_Os02g37180 | Os02g0582800 | - | Detail |
| C1H2g11080 | 2:21,214,230-21,215,002 | - | C2H2g27221 | - | - | Os02g0582900 | - | Detail |
| C1H2g04636 | 2:21,217,332-21,217,676 | - | - | - | - | - | - | Detail |
| C1H2g22529 | 2:21,219,361-21,220,105 | - | C2H2g18909 | - | - | - | - | Detail |
| C1H2g02482 | 2:21,240,091-21,240,741 | - | C2H2g20235 | CX2g020020 | LOC_Os02g37250 | Os02g0583700 | - | Detail |
| Hap2 ID | Location | Strand | Hap1 ID | T2T ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| C2H1g13015 | 1:30,344-38,194 | + | C1H1g02341 | CX1g002198 | LOC_Os01g01010 | Os01g0100100 | - | Detail |
| C2H1g25732 | 1:48,873-52,060 | + | C1H1g23301 | CX1g002858 | LOC_Os01g01030 | Os01g0100400 | - | Detail |
| C2H1g24136 | 1:52,640-56,672 | + | C1H1g05541 | CX1g003623 | LOC_Os01g01040 | Os01g0100500 | - | Detail |
| C2H1g01770 | 1:59,118-63,079 | + | C1H1g18141 | - | LOC_Os01g01050 | Os01g0100600 | - | Detail |
| C2H1g21686 | 1:63,306-64,660 | + | C1H1g06702 | CX11g013230 | LOC_Os01g01060 | Os01g0100700 | - | Detail |
| C2H1g03140 | 1:68,024-72,245 | + | C1H1g15122 | CX1g001772 | LOC_Os01g01070 | Os01g0100800 | - | Detail |
| C2H1g12741 | 1:73,014-78,891 | + | C1H1g26676 | CX1g003961 | LOC_Os01g01080 | Os01g0100900 | SPL1, OsSPL1 | Detail |
| C2H1g30020 | 1:80,174-82,594 | + | C1H1g29605 | CX1g005152 | LOC_Os01g01115 | Os01g0101150 | - | Detail |
| C2H1g12698 | 1:83,621-84,861 | + | C1H1g29605 | CX1g004895 | LOC_Os01g01120 | Os01g0101200 | - | Detail |
| C2H1g01369 | 1:84,843-88,848 | - | C1H1g15874 | CX1g005861 | LOC_Os01g01130 | Os01g0101300 | - | Detail |
| C2H1g16597 | 1:92,643-99,594 | + | C1H1g31238 | CX1g001476 | LOC_Os01g01150 | Os01g0101600 | - | Detail |
| C2H1g05732 | 1:100,560-100,965 | + | - | - | - | - | - | Detail |
| C2H1g26722 | 1:102,163-103,621 | + | C1H1g30351 | CX1g002150 | LOC_Os01g01160 | Os01g0101700 | - | Detail |
| C2H1g16862 | 1:106,953-110,388 | + | C1H1g07147 | CX1g000559 | LOC_Os01g01170 | Os01g0101800 | - | Detail |
| C2H1g08637 | 1:110,582-110,800 | - | C1H1g02987 | CX1g003279 | LOC_Os01g01180 | Os01g0101900 | - | Detail |
| C2H1g21658 | 1:111,441-113,036 | - | C1H1g29256 | CX1g002179 | LOC_Os01g01190 | Os01g0102000 | OsNPC6 | Detail |
| C2H1g21224 | 1:117,410-118,475 | + | C1H1g23624 | CX1g004841 | LOC_Os01g01280 | Os01g0102300 | OsTLP27 | Detail |
| C2H1g12981 | 1:121,812-123,137 | + | C1H1g19237 | CX1g005639 | LOC_Os01g01290 | Os01g0102400 | OsNF-YC9, OsHAP5H | Detail |
| C2H1g13148 | 1:123,569-126,216 | + | C1H1g02228 | CX1g005627 | LOC_Os01g01295 | Os01g0102500 | - | Detail |
| C2H1g25133 | 1:127,278-129,395 | + | C1H1g19000 | CX1g006384 | LOC_Os01g01302 | Os01g0102600 | - | Detail |
| T2T ID | Location | Strand | Hap1 ID | Hap2 ID | MSU7 ID | RAPDB ID | Symbol | Details |
|---|---|---|---|---|---|---|---|---|
| CX3g025627 | 3:2,799,801-2,800,274 | - | C1H3g26257 | C2H3g24140 | LOC_Os03g06390 | Os03g0159900 | - | Detail |
| CX3g029121 | 3:2,802,398-2,802,556 | + | - | - | - | - | - | Detail |
| CX3g025658 | 3:2,804,691-2,810,998 | + | C1H3g14921 | C2H3g08821 | LOC_Os03g06410 | Os03g0160100 | ACDR1, SPL3, OsEDR1, OsACDR1, EDR1 | Detail |
| CX3g028864 | 3:2,812,778-2,813,338 | + | C1H10g04845 | - | LOC_Os03g06420 | Os03g0160200 | - | Detail |
| CX3g027015 | 3:2,815,906-2,816,199 | - | C1H3g16143 | C2H3g01208 | LOC_Os03g06430 | Os03g0160300 | - | Detail |
| CX3g030159 | 3:2,819,263-2,822,440 | - | C1H3g24862 | C2H3g27894 | LOC_Os03g06440 | Os03g0160400 | OsDNA2_8 | Detail |
| CX3g027024 | 3:2,832,276-2,835,320 | - | C1H3g27076 | C2H3g10921 | LOC_Os03g06460 | Os03g0160600 | - | Detail |
| CX3g031001 | 3:2,843,435-2,844,043 | - | C1H3g12946 | C2H3g17145 | LOC_Os03g06480 | Os03g0160900 | - | Detail |
| CX3g025715 | 3:2,854,108-2,857,197 | + | C1H3g27407 | C2H3g23882 | - | - | - | Detail |
| CX3g027922 | 3:2,862,127-2,870,160 | + | C1H3g11682 | C2H3g05410 | LOC_Os03g06510 | Os03g0161100 | - | Detail |
| CX3g029615 | 3:2,871,187-2,876,200 | - | C1H3g12948 | C2H3g11481 | LOC_Os03g06520 | Os03g0161200 | - | Detail |
| CX3g030950 | 3:2,881,702-2,881,875 | - | - | - | - | - | - | Detail |
| CX3g031150 | 3:2,888,115-2,890,003 | + | C1H3g19950 | C2H3g04338 | LOC_Os03g06570 | Os03g0161400 | - | Detail |
| CX3g029485 | 3:2,897,946-2,900,238 | + | C1H3g16884 | C2H3g04897 | LOC_Os03g06580 | Os03g0161500 | - | Detail |
| CX3g025939 | 3:2,905,375-2,905,524 | + | - | - | - | - | - | Detail |
| CX3g029738 | 3:2,905,701-2,906,162 | - | C1H3g31680 | C2H3g20671 | LOC_Os03g06610 | Os03g0161600 | OsEPFL6 | Detail |
| CX3g026348 | 3:2,910,519-2,910,761 | - | - | - | - | - | - | Detail |
| CX3g031187 | 3:2,914,365-2,914,532 | + | - | - | - | - | - | Detail |
| CX3g029835 | 3:2,921,953-2,924,128 | + | C1H3g19723 | C2H3g16543 | LOC_Os03g06620 | Os03g0161800 | - | Detail |
| CX3g029527 | 3:2,925,685-2,927,899 | + | C1H3g17239 | C2H3g18983 | LOC_Os03g06630 | Os03g0795900 | HSFA2E, HSfA2e, OsHsfA2e, OsHsf-12, HSF12 | Detail |